RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 CTPS1P17812 591 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 TNFRSF1BP20333 461 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 EDN2P20800 178 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 ABCD1P33897 745 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 CENPAP49450 140 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 CTCFP49711 727 aaPredicted RBP6.29□□□□□ -1.4
RTN4-214ENST00000486085 CLCN5P51795 746 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 CDH12P55289 794 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 GEMIN4P57678 1058 aaKnown RBP6.29□□□□□ -1.4
RTN4-214ENST00000486085 CAPSQ13938 189 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 ZKSCAN2Q63HK3 967 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 ZNF425Q6IV72 752 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 CES5AQ6NT32 575 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 INO80CQ6PI98 192 aaPredicted RBP6.29□□□□□ -1.4
RTN4-214ENST00000486085 PARM1Q6UWI2 310 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 DSTYKQ6XUX3 929 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 CTU1Q7Z7A3 348 aaKnown RBP6.29□□□□□ -1.4
RTN4-214ENST00000486085 KIAA2013Q8IYS2 634 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 ZMIZ2Q8NF64 920 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 TDRD7Q8NHU6 1098 aaKnown RBP6.29□□□□□ -1.4
RTN4-214ENST00000486085 RNF183Q96D59 192 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 SAAL1Q96ER3 474 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 YME1L1Q96TA2 773 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 MVB12BQ9H7P6 319 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 SIRT3Q9NTG7 399 aaPredicted RBP6.29□□□□□ -1.4
RTN4-214ENST00000486085 OLA1Q9NTK5 396 aaKnown RBP6.29□□□□□ -1.4
RTN4-214ENST00000486085 TAS2R10Q9NYW0 307 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 KTN1Q86UP2 1357 aaKnown RBP6.29□□□□□ -1.4
RTN4-214ENST00000486085 AKAP12Q02952 1782 aa6.29□□□□□ -1.4
RTN4-214ENST00000486085 C1orf167Q5SNV9 1468 aa6.28□□□□□ -1.4
RTN4-214ENST00000486085 MON2Q7Z3U7 1717 aa6.28□□□□□ -1.4
RTN4-214ENST00000486085 NRKQ7Z2Y5 1582 aa6.28□□□□□ -1.4
RTN4-214ENST00000486085 CBY3A6NI87 242 aa6.28□□□□□ -1.4
RTN4-214ENST00000486085 MMP3P08254 477 aa6.28□□□□□ -1.4
RTN4-214ENST00000486085 PSG1P11464 419 aa6.28□□□□□ -1.4
RTN4-214ENST00000486085 CDK4P11802 303 aa6.28□□□□□ -1.4
RTN4-214ENST00000486085 TTKP33981 857 aa6.28□□□□□ -1.4
RTN4-214ENST00000486085 NR4A2P43354 598 aa6.28□□□□□ -1.4
RTN4-214ENST00000486085 EFNA5P52803 228 aa6.28□□□□□ -1.4
RTN4-214ENST00000486085 PPATQ06203 517 aa6.28□□□□□ -1.4
RTN4-214ENST00000486085 ODF3L2Q3SX64 289 aa6.28□□□□□ -1.4
RTN4-214ENST00000486085 ATG9BQ674R7 924 aa6.28□□□□□ -1.4
RTN4-214ENST00000486085 TBC1D26Q86UD7 250 aa6.28□□□□□ -1.4
RTN4-214ENST00000486085 PIM3Q86V86 326 aa6.28□□□□□ -1.4
RTN4-214ENST00000486085 MCPH1Q8NEM0 835 aa6.28□□□□□ -1.4
RTN4-214ENST00000486085 GABPB2Q8TAK5 448 aaPredicted RBP6.28□□□□□ -1.4
RTN4-214ENST00000486085 METTL6Q8TCB7 284 aa6.28□□□□□ -1.4
RTN4-214ENST00000486085 VOPP1Q96AW1 172 aa6.28□□□□□ -1.4
RTN4-214ENST00000486085 C7orf26Q96N11 449 aa6.28□□□□□ -1.4
RTN4-214ENST00000486085 NR1H4Q96RI1 486 aaPredicted RBP6.28□□□□□ -1.4
RTN4-214ENST00000486085 KLHL31Q9H511 634 aa6.28□□□□□ -1.4
RTN4-214ENST00000486085 SPATS2LQ9NUQ6 558 aaKnown RBP6.28□□□□□ -1.4
RTN4-214ENST00000486085 STK26Q9P289 416 aa6.28□□□□□ -1.4
RTN4-214ENST00000486085 ORC3Q9UBD5 711 aaPredicted RBP6.28□□□□□ -1.4
RTN4-214ENST00000486085 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.28□□□□□ -1.4
RTN4-214ENST00000486085 NSD2O96028 1365 aa6.28□□□□□ -1.4
RTN4-214ENST00000486085 AHDC1Q5TGY3 1603 aaPredicted RBP6.28□□□□□ -1.4
RTN4-214ENST00000486085 KDM3AQ9Y4C1 1321 aa6.27□□□□□ -1.41
RTN4-214ENST00000486085 A0A1W2PQM1 296 aa6.27□□□□□ -1.41
RTN4-214ENST00000486085 LDLRAD4O15165 306 aa6.27□□□□□ -1.41
RTN4-214ENST00000486085 ATP2C2O75185 946 aa6.27□□□□□ -1.41
RTN4-214ENST00000486085 ZNF8P17098 575 aaPredicted RBP6.27□□□□□ -1.41
RTN4-214ENST00000486085 PTPN2P17706 415 aa6.27□□□□□ -1.41
RTN4-214ENST00000486085 MAN1A1P33908 653 aa6.27□□□□□ -1.41
RTN4-214ENST00000486085 PTGER1P34995 402 aa6.27□□□□□ -1.41
RTN4-214ENST00000486085 CLDN2P57739 230 aa6.27□□□□□ -1.41
RTN4-214ENST00000486085 SELENOVP59797 346 aa6.27□□□□□ -1.41
RTN4-214ENST00000486085 DCTN2Q13561 401 aaKnown RBP6.27□□□□□ -1.41
RTN4-214ENST00000486085 KRT32Q14532 448 aa6.27□□□□□ -1.41
RTN4-214ENST00000486085 RALBP1Q15311 655 aa6.27□□□□□ -1.41
RTN4-214ENST00000486085 DUSP6Q16828 381 aa6.27□□□□□ -1.41
RTN4-214ENST00000486085 HAUS3Q68CZ6 603 aa6.27□□□□□ -1.41
RTN4-214ENST00000486085 NCAPH2Q6IBW4 605 aa6.27□□□□□ -1.41
RTN4-214ENST00000486085 IRF2BP2Q7Z5L9 587 aa6.27□□□□□ -1.41
RTN4-214ENST00000486085 CPLX4Q7Z7G2 160 aa6.27□□□□□ -1.41
RTN4-214ENST00000486085 DIS3L2Q8IYB7 885 aaKnown RBP6.27□□□□□ -1.41
RTN4-214ENST00000486085 SLC35F5Q8WV83 523 aa6.27□□□□□ -1.41
RTN4-214ENST00000486085 TMEM18Q96B42 140 aa6.27□□□□□ -1.41
RTN4-214ENST00000486085 CDK19Q9BWU1 502 aa6.27□□□□□ -1.41
RTN4-214ENST00000486085 C1QTNF7Q9BXJ2 289 aa6.27□□□□□ -1.41
RTN4-214ENST00000486085 NPFFR1Q9GZQ6 430 aa6.27□□□□□ -1.41
RTN4-214ENST00000486085 NHSL1Q5SYE7 1610 aa6.27□□□□□ -1.41
RTN4-214ENST00000486085 EDC4Q6P2E9 1401 aaKnown RBP6.26□□□□□ -1.41
RTN4-214ENST00000486085 H3BNX3 289 aa6.26□□□□□ -1.41
RTN4-214ENST00000486085 EBAG9O00559 213 aa6.26□□□□□ -1.41
RTN4-214ENST00000486085 HEXAP06865 529 aa6.26□□□□□ -1.41
RTN4-214ENST00000486085 TFPIP10646 304 aa6.26□□□□□ -1.41
RTN4-214ENST00000486085 RYKP34925 604 aa6.26□□□□□ -1.41
RTN4-214ENST00000486085 ARL1P40616 181 aaPredicted RBP6.26□□□□□ -1.41
RTN4-214ENST00000486085 SIM2Q14190 667 aaPredicted RBP6.26□□□□□ -1.41
RTN4-214ENST00000486085 LPIN1Q14693 890 aa6.26□□□□□ -1.41
RTN4-214ENST00000486085 PPP2R5BQ15173 497 aa6.26□□□□□ -1.41
RTN4-214ENST00000486085 PLEKHO1Q53GL0 409 aaPredicted RBP6.26□□□□□ -1.41
RTN4-214ENST00000486085 DCAF12L2Q5VW00 463 aa6.26□□□□□ -1.41
RTN4-214ENST00000486085 SLC46A3Q7Z3Q1 461 aa6.26□□□□□ -1.41
RTN4-214ENST00000486085 C1QL2Q7Z5L3 287 aa6.26□□□□□ -1.41
RTN4-214ENST00000486085 TBC1D1Q86TI0 1168 aaPredicted RBP6.26□□□□□ -1.41
RTN4-214ENST00000486085 RBFAQ8N0V3 343 aa6.26□□□□□ -1.41
RTN4-214ENST00000486085 C7orf57Q8NEG2 295 aa6.26□□□□□ -1.41
RTN4-214ENST00000486085 BICD2Q8TD16 824 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms