RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 LIG3P49916 1009 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 CLDN2P57739 230 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 CCZ1BP86790 482 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 CCZ1P86791 482 aaPredicted RBP12.52□□□□□ -0.41
HMG20B-211ENST00000486028 ADCY2Q08462 1091 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 NIPAL4Q0D2K0 466 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 TRAF2Q12933 501 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 ZBTB17Q13105 803 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 XRCC4Q13426 336 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 SUZ12Q15022 739 aaKnown RBP12.52□□□□□ -0.41
HMG20B-211ENST00000486028 PRKD1Q15139 912 aaPredicted RBP12.52□□□□□ -0.41
HMG20B-211ENST00000486028 ZNF423Q2M1K9 1284 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 Q6ZSR6 202 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 DPPA4Q7L190 304 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 ABI3BPQ7Z7G0 1075 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 OXR1Q8N573 874 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 DENND6BQ8NEG7 585 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 ARRDC2Q8TBH0 407 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 AGAP3Q96P47 875 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 ELF4Q99607 663 aaPredicted RBP12.52□□□□□ -0.41
HMG20B-211ENST00000486028 SLC32A1Q9H598 525 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 ERVMER34-1Q9H9K5 563 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 TM7SF3Q9NS93 570 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 FNDC3AQ9Y2H6 1198 aaKnown RBP12.52□□□□□ -0.41
HMG20B-211ENST00000486028 PCDHGB2Q9Y5G2 931 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 CAPN6Q9Y6Q1 641 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 A6NNZ2 444 aa12.51□□□□□ -0.41
HMG20B-211ENST00000486028 H0Y8X5 98 aa12.51□□□□□ -0.41
HMG20B-211ENST00000486028 APOC4-APOC2K7ER74 178 aa12.51□□□□□ -0.41
HMG20B-211ENST00000486028 LZTS3O60299 673 aaPredicted RBP12.51□□□□□ -0.41
HMG20B-211ENST00000486028 APOC2P02655 101 aa12.51□□□□□ -0.41
HMG20B-211ENST00000486028 THEGLP0DJG4 465 aa12.51□□□□□ -0.41
HMG20B-211ENST00000486028 C6P13671 934 aa12.51□□□□□ -0.41
HMG20B-211ENST00000486028 CD59P13987 128 aa12.51□□□□□ -0.41
HMG20B-211ENST00000486028 CSRP1P21291 193 aaKnown RBP12.51□□□□□ -0.41
HMG20B-211ENST00000486028 ARRB1P49407 418 aaPredicted RBP12.51□□□□□ -0.41
HMG20B-211ENST00000486028 EPHB1P54762 984 aa12.51□□□□□ -0.41
HMG20B-211ENST00000486028 SEMG2Q02383 582 aa12.51□□□□□ -0.41
HMG20B-211ENST00000486028 TEX44Q53QW1 395 aa12.51□□□□□ -0.41
HMG20B-211ENST00000486028 GCNT7Q6ZNI0 430 aa12.51□□□□□ -0.41
HMG20B-211ENST00000486028 USP45Q70EL2 814 aa12.51□□□□□ -0.41
HMG20B-211ENST00000486028 B4GALNT4Q76KP1 1039 aa12.51□□□□□ -0.41
HMG20B-211ENST00000486028 ZC3H18Q86VM9 953 aaKnown RBP12.51□□□□□ -0.41
HMG20B-211ENST00000486028 SPATS2Q86XZ4 545 aaKnown RBP12.51□□□□□ -0.41
HMG20B-211ENST00000486028 CNTD1Q8N815 330 aa12.51□□□□□ -0.41
HMG20B-211ENST00000486028 CENPTQ96BT3 561 aa12.51□□□□□ -0.41
HMG20B-211ENST00000486028 HAUS1Q96CS2 278 aa12.51□□□□□ -0.41
HMG20B-211ENST00000486028 HES6Q96HZ4 224 aa12.51□□□□□ -0.41
HMG20B-211ENST00000486028 BMFQ96LC9 184 aa12.51□□□□□ -0.41
HMG20B-211ENST00000486028 KLF6Q99612 283 aaPredicted RBP12.51□□□□□ -0.41
HMG20B-211ENST00000486028 FERMT1Q9BQL6 677 aa12.51□□□□□ -0.41
HMG20B-211ENST00000486028 LZTFL1Q9NQ48 299 aa12.51□□□□□ -0.41
HMG20B-211ENST00000486028 PACSIN2Q9UNF0 486 aaPredicted RBP12.51□□□□□ -0.41
HMG20B-211ENST00000486028 ADAMTS9Q9P2N4 1935 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 DOCK9Q9BZ29 2069 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 A0A1B0GTQ1 180 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 POM121BA6NF01 834 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 A8MX80 341 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 H7C0C1 242 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 TOR1BO14657 336 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 YKT6O15498 198 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 DDX3YO15523 660 aaKnown RBP12.5□□□□□ -0.41
HMG20B-211ENST00000486028 ELFN1P0C7U0 828 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 CYP2A6P11509 494 aaPredicted RBP12.5□□□□□ -0.41
HMG20B-211ENST00000486028 VIPR1P32241 457 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 CD86P42081 329 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 RABIFP47224 123 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 ATP5OP48047 213 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 RXRGP48443 463 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 CCT8P50990 548 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 RPL26P61254 145 aaKnown RBP12.5□□□□□ -0.41
HMG20B-211ENST00000486028 RALGDSQ12967 914 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 ZNF211Q13398 564 aaPredicted RBP12.5□□□□□ -0.41
HMG20B-211ENST00000486028 LRRC14Q15048 493 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 PRAMEF14Q5SWL7 426 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 LIPIQ6XZB0 460 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 KYAT3Q6YP21 454 aaKnown RBP12.5□□□□□ -0.41
HMG20B-211ENST00000486028 ERMP1Q7Z2K6 904 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 PTAR1Q7Z6K3 402 aaPredicted RBP12.5□□□□□ -0.41
HMG20B-211ENST00000486028 PIP4P1Q86T03 277 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 OR13H1Q8NG92 308 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 PIH1D2Q8WWB5 315 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 SCRN2Q96FV2 425 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 IMP4Q96G21 291 aaKnown RBP12.5□□□□□ -0.41
HMG20B-211ENST00000486028 QKIQ96PU8 341 aaKnown RBP eCLIP12.5□□□□□ -0.41
HMG20B-211ENST00000486028 ALS2CR12Q96Q35 445 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 VAT1Q99536 393 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 ADGRE3Q9BY15 652 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 CEP41Q9BYV8 373 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 SLC25A51Q9H1U9 297 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 GLOD4Q9HC38 313 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 B4GALT6Q9UBX8 382 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 RPL26L1Q9UNX3 145 aaKnown RBP12.5□□□□□ -0.41
HMG20B-211ENST00000486028 CHKBQ9Y259 395 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 PPP2R2CQ9Y2T4 447 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 PPIL1Q9Y3C6 166 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 PLXNA2O75051 1894 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 SPTBN2O15020 2390 aa12.5□□□□□ -0.41
HMG20B-211ENST00000486028 GOLGA6L9A6NEM1 432 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 SH3BP5O60239 455 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms