RNA–Protein interactions for RNA: ENST00000485967.1

SCAP-211, Transcript of SREBF chaperone, human

TSL 2

Gene SCAP, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAP-211	ENST00000485967	RPS21	P63220	83 aa	Known RBP	13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	CDK18	Q07002	472 aa		13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	SGCG	Q13326	291 aa		13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	OASL	Q15646	514 aa	Known RBP	13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	PARP6	Q2NL67	630 aa		13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	KIAA1161	Q6NSJ0	714 aa		13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	DRICH1	Q6PGQ1	229 aa	Predicted RBP	13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	HORMAD1	Q86X24	394 aa		13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	ZSWIM9	Q86XI8	627 aa		13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	PRELID2	Q8N945	189 aa		13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	LPCAT1	Q8NF37	534 aa		13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	KLK6	Q92876	244 aa		13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	BIRC7	Q96CA5	298 aa		13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	LRRC45	Q96CN5	670 aa		13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	PPP1R2P1	Q96PQ5	205 aa		13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	WRAP53	Q9BUR4	548 aa	Known RBP	13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	TDRD1	Q9BXT4	1180 aa	Known RBP	13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	GBA3	Q9H227	469 aa		13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	VPS45	Q9NRW7	570 aa		13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	GOLGA6A	Q9NYA3	693 aa		13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	EIF2B4	Q9UI10	523 aa	Known RBP	13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	ITM2B	Q9Y287	266 aa		13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	AAR2	Q9Y312	384 aa	Known RBP	13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	NUMA1	Q14980	2115 aa		13.91	□□□□□ -0.18
SCAP-211	ENST00000485967	ASPM	Q8IZT6	3477 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967		A8MX80	341 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	AREL1	O15033	823 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	MMP20	O60882	483 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	TUBB4A	P04350	444 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	GNS	P15586	552 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	CTPS1	P17812	591 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	ITPKA	P23677	461 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	PSMB4	P28070	264 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	GDF10	P55107	478 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	WNT3A	P56704	352 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	RPL26	P61254	145 aa	Known RBP	13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	SEMG2	Q02383	582 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	MPP3	Q13368	585 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	IHH	Q14623	411 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	SLC14A2	Q15849	920 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	P3H1	Q32P28	736 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	TMEM52B	Q4KMG9	183 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	SETMAR	Q53H47	684 aa	Predicted RBP	13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	NYAP1	Q6ZVC0	841 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	USP45	Q70EL2	814 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	ZSCAN30	Q86W11	494 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	TRIM69	Q86WT6	500 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	IPMK	Q8NFU5	416 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	ATL2	Q8NHH9	583 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	PIH1D2	Q8WWB5	315 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	ZNF592	Q92610	1267 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	FSD1L	Q9BXM9	530 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	ARRDC1-AS1	Q9H2J1	176 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	RNF14	Q9UBS8	474 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	GGT7	Q9UJ14	662 aa		13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	RPL26L1	Q9UNX3	145 aa	Known RBP	13.9	□□□□□ -0.18
SCAP-211	ENST00000485967	GON4L	Q3T8J9	2241 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	IGLON5	A6NGN9	336 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	KIF2A	O00139	706 aa	Predicted RBP	13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	SLC31A1	O15431	190 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	PSMD3	O43242	534 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	LZTS3	O60299	673 aa	Predicted RBP	13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	FZD6	O60353	706 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	GDF9	O60383	454 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	EPN2	O95208	641 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	IGHV4-34	P06331	123 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	CD27	P26842	260 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	NUDT1	P36639	197 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	LMAN1	P49257	510 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	PPP2CB	P62714	309 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	PPP2CA	P67775	309 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	ARHGEF7	Q14155	803 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	PPM1J	Q5JR12	505 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	SEL1L3	Q68CR1	1132 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	CREG2	Q8IUH2	290 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	SYT12	Q8IV01	421 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	TAB3	Q8N5C8	712 aa	Predicted RBP	13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	SPOCK2	Q92563	424 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	RTP4	Q96DX8	246 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	SCRN2	Q96FV2	425 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	OXNAD1	Q96HP4	312 aa	Predicted RBP	13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	MLPH	Q9BV36	600 aa	Predicted RBP	13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	SLC17A9	Q9BYT1	436 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	PAK5	Q9P286	719 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	B4GALT6	Q9UBX8	382 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	SUSD2	Q9UGT4	822 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	PCDHGA5	Q9Y5G8	931 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967	PLXND1	Q9Y4D7	1925 aa		13.89	□□□□□ -0.19
SCAP-211	ENST00000485967		A0A1W2PPC4	97 aa		13.88	□□□□□ -0.19
SCAP-211	ENST00000485967	ANKRD66	B4E2M5	251 aa		13.88	□□□□□ -0.19
SCAP-211	ENST00000485967		E7EVH7	732 aa		13.88	□□□□□ -0.19
SCAP-211	ENST00000485967	FOXD2	O60548	495 aa	Predicted RBP	13.88	□□□□□ -0.19
SCAP-211	ENST00000485967	PHF2	O75151	1096 aa		13.88	□□□□□ -0.19
SCAP-211	ENST00000485967	TM7SF2	O76062	418 aa		13.88	□□□□□ -0.19
SCAP-211	ENST00000485967	METTL18	O95568	372 aa		13.88	□□□□□ -0.19
SCAP-211	ENST00000485967	NDST3	O95803	873 aa		13.88	□□□□□ -0.19
SCAP-211	ENST00000485967	PAK4	O96013	591 aa	Predicted RBP	13.88	□□□□□ -0.19
SCAP-211	ENST00000485967	PRL	P01236	227 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms