RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 TROVE2P10155 538 aaKnown RBP eCLIP4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 CYP2D6P10635 497 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 TSHRP16473 764 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 TYMPP19971 482 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 CCNA2P20248 432 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 GALP22466 123 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 TBXAS1P24557 533 aaPredicted RBP4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 CSF2RBP32927 897 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 ADCY8P40145 1251 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 HAAOP46952 286 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 LMAN1P49257 510 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 ZNF81P51508 661 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 RPS6KA3P51812 740 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 AGFG1P52594 562 aaKnown RBP4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 RRADP55042 308 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 POLE2P56282 527 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 CSNK2BP67870 215 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 NOP14P78316 857 aaKnown RBP4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 PPIDQ08752 370 aaKnown RBP4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 COTL1Q14019 142 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 CRY1Q16526 586 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 TXNRD1Q16881 649 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 PGS1Q32NB8 556 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 UAP1L1Q3KQV9 507 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 TBC1D25Q3MII6 688 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 CCDC88AQ3V6T2 1871 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 FUT11Q495W5 492 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 TMEM119Q4V9L6 283 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 LRRC23Q53EV4 343 aaPredicted RBP4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 FAM47AQ5JRC9 791 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 ALS2CLQ60I27 953 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 ANKRD40Q6AI12 368 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 NCAPH2Q6IBW4 605 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 SLC25A24Q6NUK1 477 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 ERICH5Q6P6B1 374 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 MOXD1Q6UVY6 613 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 LRIG3Q6UXM1 1119 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 USP45Q70EL2 814 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 TAOK1Q7L7X3 1001 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 RABEPKQ7Z6M1 372 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 TADA2BQ86TJ2 420 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 CAND1Q86VP6 1230 aaKnown RBP4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 GATAD2AQ86YP4 633 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 CD302Q8IX05 232 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 MCEMP1Q8IX19 187 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 ZNF444Q8N0Y2 327 aaPredicted RBP4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 MREGQ8N565 214 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 POMGNT2Q8NAT1 580 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 SNED1Q8TER0 1413 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 SEPT1Q8WYJ6 367 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 STAMQ92783 540 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 VPS33AQ96AX1 596 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 MSANTD3Q96H12 275 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 IFT74Q96LB3 600 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 CCDC42Q96M95 316 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 LRRC37BQ96QE4 947 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 MMS19Q96T76 1030 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 TSG101Q99816 390 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 PDCD2LQ9BRP1 358 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 COLEC11Q9BWP8 271 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 RAB34Q9BZG1 259 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 GPR63Q9BZJ6 419 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 TRIM2Q9C040 744 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 FAM107BQ9H098 131 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 ISCUQ9H1K1 167 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 SERINC1Q9NRX5 453 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 FAM114A2Q9NRY5 505 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 AGPAT5Q9NUQ2 364 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 UCKL1Q9NWZ5 548 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 NINJ2Q9NZG7 142 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 MBD2Q9UBB5 411 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 FETUBQ9UGM5 382 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 GUCA1BQ9UMX6 200 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 DLGAP4Q9Y2H0 992 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 HYOU1Q9Y4L1 999 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 CCL27Q9Y4X3 112 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 MYH13Q9UKX3 1938 aa4.1□□□□□ -1.75
PRPF38B-205ENST00000485810 FRMD3A2A2Y4 597 aa4.09□□□□□ -1.75
PRPF38B-205ENST00000485810 CCDC78A2IDD5 438 aa4.09□□□□□ -1.75
PRPF38B-205ENST00000485810 SMCO2A6NFE2 343 aa4.09□□□□□ -1.75
PRPF38B-205ENST00000485810 A8MXE2 369 aa4.09□□□□□ -1.75
PRPF38B-205ENST00000485810 GOLGA8KD6RF30 607 aa4.09□□□□□ -1.75
PRPF38B-205ENST00000485810 ZNF561-AS1K7EIQ3 104 aa4.09□□□□□ -1.75
PRPF38B-205ENST00000485810 MYO1CO00159 1063 aa4.09□□□□□ -1.75
PRPF38B-205ENST00000485810 SCDO00767 359 aa4.09□□□□□ -1.75
PRPF38B-205ENST00000485810 WNT9AO14904 365 aa4.09□□□□□ -1.75
PRPF38B-205ENST00000485810 HNRNPDLO14979 420 aaKnown RBP4.09□□□□□ -1.75
PRPF38B-205ENST00000485810 CASC3O15234 703 aaKnown RBP4.09□□□□□ -1.75
PRPF38B-205ENST00000485810 EDIL3O43854 480 aa4.09□□□□□ -1.75
PRPF38B-205ENST00000485810 GMFGO60234 142 aa4.09□□□□□ -1.75
PRPF38B-205ENST00000485810 N4BP1O75113 896 aaKnown RBP4.09□□□□□ -1.75
PRPF38B-205ENST00000485810 ZC3H11AO75152 810 aaKnown RBP eCLIP4.09□□□□□ -1.75
PRPF38B-205ENST00000485810 GJB3O75712 270 aa4.09□□□□□ -1.75
PRPF38B-205ENST00000485810 CRTAPO75718 401 aaPredicted RBP4.09□□□□□ -1.75
PRPF38B-205ENST00000485810 BCAS2O75934 225 aaPredicted RBP4.09□□□□□ -1.75
PRPF38B-205ENST00000485810 MLYCDO95822 493 aa4.09□□□□□ -1.75
PRPF38B-205ENST00000485810 ECDO95905 644 aaPredicted RBP4.09□□□□□ -1.75
PRPF38B-205ENST00000485810 C4BPAP04003 597 aaKnown RBP4.09□□□□□ -1.75
PRPF38B-205ENST00000485810 HNRNPA1P09651 372 aaKnown RBP eCLIP4.09□□□□□ -1.75
PRPF38B-205ENST00000485810 GAAP10253 952 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms