RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 TRHDEQ9UKU6 1024 aa15.97■□□□□ 0.15
UPF3A-208ENST00000484246 DNPEPQ9ULA0 475 aa15.97■□□□□ 0.15
UPF3A-208ENST00000484246 TTLL3Q9Y4R7 772 aa15.97■□□□□ 0.15
UPF3A-208ENST00000484246 PCDHGB2Q9Y5G2 931 aa15.97■□□□□ 0.15
UPF3A-208ENST00000484246 SNX11Q9Y5W9 270 aa15.97■□□□□ 0.15
UPF3A-208ENST00000484246 GOLGA6L9A6NEM1 432 aa15.96■□□□□ 0.15
UPF3A-208ENST00000484246 A6NNZ2 444 aa15.96■□□□□ 0.15
UPF3A-208ENST00000484246 RAD51BO15315 384 aa15.96■□□□□ 0.15
UPF3A-208ENST00000484246 YKT6O15498 198 aa15.96■□□□□ 0.15
UPF3A-208ENST00000484246 MMP20O60882 483 aa15.96■□□□□ 0.15
UPF3A-208ENST00000484246 OPHN1O60890 802 aa15.96■□□□□ 0.15
UPF3A-208ENST00000484246 HEXIM1O94992 359 aaKnown RBP15.96■□□□□ 0.15
UPF3A-208ENST00000484246 PAK4O96013 591 aaPredicted RBP15.96■□□□□ 0.15
UPF3A-208ENST00000484246 PTMAP06454 111 aaKnown RBP15.96■□□□□ 0.15
UPF3A-208ENST00000484246 VIPR1P32241 457 aa15.96■□□□□ 0.15
UPF3A-208ENST00000484246 LIG3P49916 1009 aa15.96■□□□□ 0.15
UPF3A-208ENST00000484246 PFN3P60673 137 aa15.96■□□□□ 0.15
UPF3A-208ENST00000484246 RPS6KA1Q15418 735 aa15.96■□□□□ 0.15
UPF3A-208ENST00000484246 HLA-BQ31612 363 aa15.96■□□□□ 0.15
UPF3A-208ENST00000484246 LIPIQ6XZB0 460 aa15.96■□□□□ 0.15
UPF3A-208ENST00000484246 ZC3H18Q86VM9 953 aaKnown RBP15.96■□□□□ 0.15
UPF3A-208ENST00000484246 DCP2Q8IU60 420 aaKnown RBP15.96■□□□□ 0.15
UPF3A-208ENST00000484246 RAVER1Q8IY67 606 aaKnown RBP15.96■□□□□ 0.15
UPF3A-208ENST00000484246 NDUFAF2Q8N183 169 aa15.96■□□□□ 0.15
UPF3A-208ENST00000484246 CBARPQ8N350 705 aaPredicted RBP15.96■□□□□ 0.15
UPF3A-208ENST00000484246 TP53I13Q8NBR0 393 aaPredicted RBP15.96■□□□□ 0.15
UPF3A-208ENST00000484246 KLK6Q92876 244 aa15.96■□□□□ 0.15
UPF3A-208ENST00000484246 AGAP3Q96P47 875 aa15.96■□□□□ 0.15
UPF3A-208ENST00000484246 TRIB3Q96RU7 358 aa15.96■□□□□ 0.15
UPF3A-208ENST00000484246 WRAP53Q9BUR4 548 aaKnown RBP15.96■□□□□ 0.15
UPF3A-208ENST00000484246 GTPBP2Q9BX10 602 aaKnown RBP15.96■□□□□ 0.15
UPF3A-208ENST00000484246 FRMD8P1Q9BZ68 369 aaPredicted RBP15.96■□□□□ 0.15
UPF3A-208ENST00000484246 FZD3Q9NPG1 666 aa15.96■□□□□ 0.15
UPF3A-208ENST00000484246 GDF3Q9NR23 364 aa15.96■□□□□ 0.15
UPF3A-208ENST00000484246 KCTD5Q9NXV2 234 aa15.96■□□□□ 0.15
UPF3A-208ENST00000484246 CACNA1EQ15878 2313 aa15.96■□□□□ 0.15
UPF3A-208ENST00000484246 CEP250Q9BV73 2442 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 A0A0J9YYE9 177 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 CAPN8A6NHC0 703 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 ZSCAN12O43309 604 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 TRBC1P01850 177 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 PRKCGP05129 697 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 PDHA1P08559 390 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 RBP3P10745 1247 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 CYP2A6P11509 494 aaPredicted RBP15.95■□□□□ 0.14
UPF3A-208ENST00000484246 LHCGRP22888 699 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 CD68P34810 354 aaPredicted RBP15.95■□□□□ 0.14
UPF3A-208ENST00000484246 CD86P42081 329 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 RABIFP47224 123 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 ID4P47928 161 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 RXRGP48443 463 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 EIF3EP60228 445 aaKnown RBP15.95■□□□□ 0.14
UPF3A-208ENST00000484246 SEL1L2Q5TEA6 688 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 DBX2Q6ZNG2 339 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 SPATS2Q86XZ4 545 aaKnown RBP15.95■□□□□ 0.14
UPF3A-208ENST00000484246 REXO1L1PQ8IX06 675 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 SLC35B2Q8TB61 432 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 PDCD6IPQ8WUM4 868 aaKnown RBP15.95■□□□□ 0.14
UPF3A-208ENST00000484246 IFT43Q96FT9 208 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 BMFQ96LC9 184 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 COQ10AQ96MF6 247 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 FCRL5Q96RD9 977 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 ELF4Q99607 663 aaPredicted RBP15.95■□□□□ 0.14
UPF3A-208ENST00000484246 FERMT1Q9BQL6 677 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 TLR10Q9BXR5 811 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 CEP41Q9BYV8 373 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 GAREM1Q9H706 876 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 PCDH9Q9HC56 1237 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 SEPT10Q9P0V9 454 aa15.95■□□□□ 0.14
UPF3A-208ENST00000484246 FNDC3AQ9Y2H6 1198 aaKnown RBP15.95■□□□□ 0.14
UPF3A-208ENST00000484246 CEP192Q8TEP8 1941 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 A0A1B0GTQ1 180 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 NPIPB15A6NHN6 443 aaPredicted RBP15.94■□□□□ 0.14
UPF3A-208ENST00000484246 H7C0C1 242 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 FPGTO14772 594 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 PCDHGA12O60330 932 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 ELFN1P0C7U0 828 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 THEGLP0DJG4 465 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 ZNF30P17039 623 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 GM2AP17900 193 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 CSRP1P21291 193 aaKnown RBP15.94■□□□□ 0.14
UPF3A-208ENST00000484246 RBL1P28749 1068 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 IGFALSP35858 605 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 ATP5OP48047 213 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 CCT8P50990 548 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 FAM193AP78312 1265 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 CNGA3Q16281 694 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 WSCD2Q2TBF2 565 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 PIP4P1Q86T03 277 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 SLC13A5Q86YT5 568 aaPredicted RBP15.94■□□□□ 0.14
UPF3A-208ENST00000484246 KLHDC8BQ8IXV7 354 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 ZNF567Q8N184 647 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 SLC22A18ASQ8N1D0 253 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 PAF1Q8N7H5 531 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 OR13H1Q8NG92 308 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 OR2I1PQ8NGU4 316 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 KLHDC7BQ96G42 594 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 MYOCQ99972 504 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 ADGRE3Q9BY15 652 aa15.94■□□□□ 0.14
UPF3A-208ENST00000484246 GBA3Q9H227 469 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms