RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 CDCP1Q9H5V8 836 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 PIH1D3Q9NQM4 214 aaKnown RBP4.57□□□□□ -1.68
PTCD3-214ENST00000483925 DKK3Q9UBP4 350 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 DDX25Q9UHL0 483 aaKnown RBP4.57□□□□□ -1.68
PTCD3-214ENST00000483925 CTNNA3Q9UI47 895 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 PIN4Q9Y237 131 aaKnown RBP4.57□□□□□ -1.68
PTCD3-214ENST00000483925 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.57□□□□□ -1.68
PTCD3-214ENST00000483925 LIPGQ9Y5X9 500 aa4.57□□□□□ -1.68
PTCD3-214ENST00000483925 EPN1Q9Y6I3 576 aaPredicted RBP4.57□□□□□ -1.68
PTCD3-214ENST00000483925 GPR75-ASB3A0A0A6YYF3 556 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 EDDM13A0A1B0GTR0 161 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 RGSL1A5PLK6 1076 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 FAM90A8PA6NJQ4 464 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 ENO4A6NNW6 628 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 STRNO43815 780 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 BCAS2O75934 225 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-214ENST00000483925 HMOX1P09601 288 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 FAM90A13PP0C7W8 464 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 FAM90A24PP0C7X0 464 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 ZFXP17010 805 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-214ENST00000483925 CTPS1P17812 591 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 PROZP22891 400 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 CDAP32320 146 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 SOAT1P35610 550 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 PSMC4P43686 418 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 F2RL1P55085 397 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 SNU13P55769 128 aaKnown RBP4.56□□□□□ -1.68
PTCD3-214ENST00000483925 RPS7P62081 194 aaKnown RBP4.56□□□□□ -1.68
PTCD3-214ENST00000483925 YWHAZP63104 245 aaKnown RBP4.56□□□□□ -1.68
PTCD3-214ENST00000483925 ASIC1P78348 528 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 ZBTB16Q05516 673 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 ACSM2AQ08AH3 577 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 DYRK1AQ13627 763 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 RUNX2Q13950 521 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 VEPH1Q14D04 833 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 NAB2Q15742 525 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 HIST2H2ACQ16777 129 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-214ENST00000483925 TWISTNBQ3B726 338 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-214ENST00000483925 FUT11Q495W5 492 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 SERTAD4-AS1Q5TG53 156 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 ACSM2BQ68CK6 577 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 TXNDC8Q6A555 127 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-214ENST00000483925 SLC39A5Q6ZMH5 540 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 MICALCLQ6ZW33 695 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 RHOUQ7L0Q8 258 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 ZNF551Q7Z340 670 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-214ENST00000483925 MIER3Q7Z3K6 550 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 DSG4Q86SJ6 1040 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 KLHL7Q8IXQ5 586 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 HACE1Q8IYU2 909 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 VPS52Q8N1B4 723 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 GUF1Q8N442 669 aaKnown RBP4.56□□□□□ -1.68
PTCD3-214ENST00000483925 FAM109AQ8N4B1 249 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 MRPL43Q8N983 215 aaKnown RBP4.56□□□□□ -1.68
PTCD3-214ENST00000483925 DNAAF1Q8NEP3 725 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 IPMKQ8NFU5 416 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 BCAS4Q8TDM0 211 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 PTPMT1Q8WUK0 201 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-214ENST00000483925 SNX19Q92543 992 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 FAM136AQ96C01 138 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 ELMOD3Q96FG2 381 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 TMEM68Q96MH6 324 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 PRAM1Q96QH2 718 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 RUFY1Q96T51 708 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 UTP14AQ9BVJ6 771 aaKnown RBP4.56□□□□□ -1.68
PTCD3-214ENST00000483925 CINPQ9BW66 212 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-214ENST00000483925 TEX13BQ9BXU2 312 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 HDHD5Q9BXW7 423 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 NYXQ9GZU5 481 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 SFXN1Q9H9B4 322 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 RANGRFQ9HD47 186 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-214ENST00000483925 ENTPD7Q9NQZ7 604 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 POLE3Q9NRF9 147 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 SLC6A13Q9NSD5 602 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 ZBTB40Q9NUA8 1239 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 CHCHD3Q9NX63 227 aaKnown RBP4.56□□□□□ -1.68
PTCD3-214ENST00000483925 EXTL2Q9UBQ6 330 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 IL17BQ9UHF5 180 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 TSPYL4Q9UJ04 414 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 CPSF3Q9UKF6 684 aaKnown RBP4.56□□□□□ -1.68
PTCD3-214ENST00000483925 APPL1Q9UKG1 709 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 PACSIN3Q9UKS6 424 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 FZD1Q9UP38 647 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 KCNK7Q9Y2U2 307 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 CMAHPQ9Y471 501 aa4.56□□□□□ -1.68
PTCD3-214ENST00000483925 UTYO14607 1347 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 A0A087WV48 116 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 PRAMEF33A0A0G2JMD5 474 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 A0A1W2PS29 197 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 K7EPI3 171 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 SNAP23O00161 211 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 TLR2O60603 784 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 PRAMEF10O60809 474 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 GPC4O75487 556 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 TRIM16O95361 564 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 DDAH2O95865 285 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 NUDT3O95989 172 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 HEXAP06865 529 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 INHBAP08476 426 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms