RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 LGMNQ99538 433 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 PRMT1Q99873 361 aaKnown RBP6.01□□□□□ -1.45
CSDE1-207ENST00000483407 NOL6Q9H6R4 1146 aaKnown RBP6.01□□□□□ -1.45
CSDE1-207ENST00000483407 KLHL11Q9NVR0 708 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 DDIT4Q9NX09 232 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 VPS28Q9UK41 221 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 ZDHHC9Q9Y397 364 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.01□□□□□ -1.45
CSDE1-207ENST00000483407 RAI2Q9Y5P3 530 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 NBEAQ8NFP9 2946 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 NUMA1Q14980 2115 aa6.01□□□□□ -1.45
CSDE1-207ENST00000483407 MUC22E2RYF6 1773 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-207ENST00000483407 KNL1Q8NG31 2342 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 COL5A1P20908 1838 aaPredicted RBP6□□□□□ -1.45
CSDE1-207ENST00000483407 SYNJ2BP-COX16A0A087WUM0 186 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 NEMP2A6NFY4 417 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 KPNA3O00505 521 aaPredicted RBP6□□□□□ -1.45
CSDE1-207ENST00000483407 TRIM38O00635 465 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 SLC31A1O15431 190 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 SIGLEC6O43699 453 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 DLX3O60479 287 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 HSF2BPO75031 334 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 CLDN11O75508 207 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 KCNH1O95259 989 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 FGFR1OPO95684 399 aaKnown RBP6□□□□□ -1.45
CSDE1-207ENST00000483407 AFPP02771 609 aaKnown RBP6□□□□□ -1.45
CSDE1-207ENST00000483407 PRNPP04156 253 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 SCG5P05408 212 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 THEGLP0DJG4 465 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 HNRNPA2B1P22626 353 aaKnown RBP6□□□□□ -1.45
CSDE1-207ENST00000483407 DGKAP23743 735 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 HOXC12P31275 282 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 RECQLP46063 649 aaPredicted RBP6□□□□□ -1.45
CSDE1-207ENST00000483407 NUMBP49757 651 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 DUSP3P51452 185 aaPredicted RBP6□□□□□ -1.45
CSDE1-207ENST00000483407 METAP1P53582 386 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 UCNP55089 124 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 SNX16P57768 344 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 CXADRP78310 365 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 KRT83P78385 493 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 TLE3Q04726 772 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 CCDC173Q0VFZ6 552 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 CNTN1Q12860 1018 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 NME3Q13232 169 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 PDCLQ13371 301 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 TBC1D25Q3MII6 688 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 POM121L1PQ3SYA9 428 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 TAF1BQ53T94 588 aaPredicted RBP6□□□□□ -1.45
CSDE1-207ENST00000483407 EFHC1Q5JVL4 640 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 GTF2IRD2BQ6EKJ0 949 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 FOXR2Q6PJQ5 311 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 KDM7AQ6ZMT4 941 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 ENOSF1Q7L5Y1 443 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 TMC3Q7Z5M5 1100 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 ZNF605Q86T29 641 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 GTF2IRD2Q86UP8 949 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 CIR1Q86X95 450 aaPredicted RBP6□□□□□ -1.45
CSDE1-207ENST00000483407 THNSL2Q86YJ6 484 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 SPACA3Q8IXA5 215 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 DEFB106AQ8N104 65 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 SH2D3CQ8N5H7 860 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 ATP11CQ8NB49 1132 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 TMEM145Q8NBT3 493 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 ZNF248Q8NDW4 579 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 ENOX1Q8TC92 643 aaKnown RBP6□□□□□ -1.45
CSDE1-207ENST00000483407 BTN2A2Q8WVV5 523 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 ZNF606Q8WXB4 792 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 PPP1R16AQ96I34 528 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 TIGD1Q96MW7 591 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 ZNF578Q96N58 590 aaPredicted RBP6□□□□□ -1.45
CSDE1-207ENST00000483407 NOX5Q96PH1 765 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 MYOCQ99972 504 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 FEM1AQ9BSK4 669 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 CALN1Q9BXU9 219 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 INTS2Q9H0H0 1204 aaKnown RBP6□□□□□ -1.45
CSDE1-207ENST00000483407 ABCG4Q9H172 646 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 USP29Q9HBJ7 922 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 UBE2TQ9NPD8 197 aaPredicted RBP6□□□□□ -1.45
CSDE1-207ENST00000483407 INTS7Q9NVH2 962 aaKnown RBP6□□□□□ -1.45
CSDE1-207ENST00000483407 ASNSD1Q9NWL6 643 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 GFOD1Q9NXC2 390 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 COX16Q9P0S2 106 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 SARDHQ9UL12 918 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 VANGL2Q9ULK5 521 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 CNTN6Q9UQ52 1028 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 SF3B6Q9Y3B4 125 aaKnown RBP6□□□□□ -1.45
CSDE1-207ENST00000483407 GOLGA4Q13439 2230 aaKnown RBP6□□□□□ -1.45
CSDE1-207ENST00000483407 ASXL3Q9C0F0 2248 aa6□□□□□ -1.45
CSDE1-207ENST00000483407 PTPRBP23467 1997 aa5.99□□□□□ -1.45
CSDE1-207ENST00000483407 A6NNZ2 444 aa5.99□□□□□ -1.45
CSDE1-207ENST00000483407 FFAR2O15552 330 aa5.99□□□□□ -1.45
CSDE1-207ENST00000483407 PIAS2O75928 621 aa5.99□□□□□ -1.45
CSDE1-207ENST00000483407 C1QL1O75973 258 aa5.99□□□□□ -1.45
CSDE1-207ENST00000483407 PCDH8O95206 1070 aa5.99□□□□□ -1.45
CSDE1-207ENST00000483407 GP1BAP07359 652 aa5.99□□□□□ -1.45
CSDE1-207ENST00000483407 RHOCP08134 193 aa5.99□□□□□ -1.45
CSDE1-207ENST00000483407 CKMT1AP12532 417 aa5.99□□□□□ -1.45
CSDE1-207ENST00000483407 PRLRP16471 622 aa5.99□□□□□ -1.45
CSDE1-207ENST00000483407 CHRNA3P32297 505 aa5.99□□□□□ -1.45
CSDE1-207ENST00000483407 ADMP35318 185 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms