RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 CHKBQ9Y259 395 aa21.02■□□□□ 0.96
SEC13-217ENST00000482647 CA5BQ9Y2D0 317 aa21.02■□□□□ 0.96
SEC13-217ENST00000482647 SNX11Q9Y5W9 270 aa21.02■□□□□ 0.96
SEC13-217ENST00000482647 FPGTO14772 594 aa21.01■□□□□ 0.95
SEC13-217ENST00000482647 LZTS3O60299 673 aaPredicted RBP21.01■□□□□ 0.95
SEC13-217ENST00000482647 STK10O94804 968 aaKnown RBP21.01■□□□□ 0.95
SEC13-217ENST00000482647 CER1O95813 267 aa21.01■□□□□ 0.95
SEC13-217ENST00000482647 PDHA1P08559 390 aa21.01■□□□□ 0.95
SEC13-217ENST00000482647 CYP2A6P11509 494 aaPredicted RBP21.01■□□□□ 0.95
SEC13-217ENST00000482647 RBL1P28749 1068 aa21.01■□□□□ 0.95
SEC13-217ENST00000482647 EPHB1P54762 984 aa21.01■□□□□ 0.95
SEC13-217ENST00000482647 USP45Q70EL2 814 aa21.01■□□□□ 0.95
SEC13-217ENST00000482647 PID1Q7Z2X4 250 aa21.01■□□□□ 0.95
SEC13-217ENST00000482647 DENND6BQ8NEG7 585 aa21.01■□□□□ 0.95
SEC13-217ENST00000482647 RBM15Q96T37 977 aaKnown RBP eCLIP21.01■□□□□ 0.95
SEC13-217ENST00000482647 FAM118BQ9BPY3 351 aa21.01■□□□□ 0.95
SEC13-217ENST00000482647 ADGRE3Q9BY15 652 aa21.01■□□□□ 0.95
SEC13-217ENST00000482647 GAREM1Q9H706 876 aa21.01■□□□□ 0.95
SEC13-217ENST00000482647 PCDH9Q9HC56 1237 aa21.01■□□□□ 0.95
SEC13-217ENST00000482647 B4GALT6Q9UBX8 382 aa21.01■□□□□ 0.95
SEC13-217ENST00000482647 PPIL1Q9Y3C6 166 aa21.01■□□□□ 0.95
SEC13-217ENST00000482647 SHROOM3Q8TF72 1996 aa21.01■□□□□ 0.95
SEC13-217ENST00000482647 A8MX80 341 aa21■□□□□ 0.95
SEC13-217ENST00000482647 SLC30A4O14863 429 aa21■□□□□ 0.95
SEC13-217ENST00000482647 RAD51BO15315 384 aa21■□□□□ 0.95
SEC13-217ENST00000482647 OPHN1O60890 802 aa21■□□□□ 0.95
SEC13-217ENST00000482647 ELFN1P0C7U0 828 aa21■□□□□ 0.95
SEC13-217ENST00000482647 C6P13671 934 aa21■□□□□ 0.95
SEC13-217ENST00000482647 VIPR1P32241 457 aa21■□□□□ 0.95
SEC13-217ENST00000482647 CTSKP43235 329 aa21■□□□□ 0.95
SEC13-217ENST00000482647 CLDN2P57739 230 aa21■□□□□ 0.95
SEC13-217ENST00000482647 NXPH1P58417 271 aa21■□□□□ 0.95
SEC13-217ENST00000482647 RALGDSQ12967 914 aa21■□□□□ 0.95
SEC13-217ENST00000482647 FAM182AQ5T1J6 154 aa21■□□□□ 0.95
SEC13-217ENST00000482647 SLC13A5Q86YT5 568 aaPredicted RBP21■□□□□ 0.95
SEC13-217ENST00000482647 ZNF567Q8N184 647 aa21■□□□□ 0.95
SEC13-217ENST00000482647 CENPTQ96BT3 561 aa21■□□□□ 0.95
SEC13-217ENST00000482647 MCCC1Q96RQ3 725 aaPredicted RBP21■□□□□ 0.95
SEC13-217ENST00000482647 KLF6Q99612 283 aaPredicted RBP21■□□□□ 0.95
SEC13-217ENST00000482647 TLR10Q9BXR5 811 aa21■□□□□ 0.95
SEC13-217ENST00000482647 C10orf88Q9H8K7 445 aa21■□□□□ 0.95
SEC13-217ENST00000482647 GDF3Q9NR23 364 aa21■□□□□ 0.95
SEC13-217ENST00000482647 DNAAF2Q9NVR5 837 aaKnown RBP21■□□□□ 0.95
SEC13-217ENST00000482647 TRMT1Q9NXH9 659 aaKnown RBP21■□□□□ 0.95
SEC13-217ENST00000482647 JRKLQ9Y4A0 524 aa21■□□□□ 0.95
SEC13-217ENST00000482647 CEP250Q9BV73 2442 aa21■□□□□ 0.95
SEC13-217ENST00000482647 PI4KAP42356 2102 aa20.99■□□□□ 0.95
SEC13-217ENST00000482647 TCRBV7S2A1N4TA0A589 114 aa20.99■□□□□ 0.95
SEC13-217ENST00000482647 A6NNZ2 444 aa20.99■□□□□ 0.95
SEC13-217ENST00000482647 KCNN4O15554 427 aa20.99■□□□□ 0.95
SEC13-217ENST00000482647 DFNA5O60443 496 aa20.99■□□□□ 0.95
SEC13-217ENST00000482647 CTPS1P17812 591 aa20.99■□□□□ 0.95
SEC13-217ENST00000482647 MSNP26038 577 aaKnown RBP20.99■□□□□ 0.95
SEC13-217ENST00000482647 SLC14A2Q15849 920 aa20.99■□□□□ 0.95
SEC13-217ENST00000482647 UAP1L1Q3KQV9 507 aa20.99■□□□□ 0.95
SEC13-217ENST00000482647 LIPIQ6XZB0 460 aa20.99■□□□□ 0.95
SEC13-217ENST00000482647 GCNT7Q6ZNI0 430 aa20.99■□□□□ 0.95
SEC13-217ENST00000482647 ABI3BPQ7Z7G0 1075 aa20.99■□□□□ 0.95
SEC13-217ENST00000482647 OR2I1PQ8NGU4 316 aa20.99■□□□□ 0.95
SEC13-217ENST00000482647 TADA1Q96BN2 335 aa20.99■□□□□ 0.95
SEC13-217ENST00000482647 BMFQ96LC9 184 aa20.99■□□□□ 0.95
SEC13-217ENST00000482647 RTKNQ9BST9 563 aa20.99■□□□□ 0.95
SEC13-217ENST00000482647 CACNA1EQ15878 2313 aa20.99■□□□□ 0.95
SEC13-217ENST00000482647 A0A0J9YYE9 177 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 H0Y8X5 98 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 KIF5CO60282 957 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 PRLP01236 227 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 TRBC1P01850 177 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 THEGLP0DJG4 465 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 NFKB1P19838 968 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 CD68P34810 354 aaPredicted RBP20.98■□□□□ 0.95
SEC13-217ENST00000482647 HNF1BP35680 557 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 SLC14A1Q13336 389 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 ARHGEF7Q14155 803 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 LRRC14Q15048 493 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 AGERQ15109 404 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 ZNF569Q5MCW4 686 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 ITPRIPL1Q6GPH6 555 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 KYAT3Q6YP21 454 aaKnown RBP20.98■□□□□ 0.95
SEC13-217ENST00000482647 Q6ZSR6 202 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 DCP2Q8IU60 420 aaKnown RBP20.98■□□□□ 0.95
SEC13-217ENST00000482647 LPCAT1Q8NF37 534 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 SPATA22Q8NHS9 363 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 RMDN1Q96DB5 314 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 IFT43Q96FT9 208 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 FCRL5Q96RD9 977 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 FRMD8P1Q9BZ68 369 aaPredicted RBP20.98■□□□□ 0.95
SEC13-217ENST00000482647 ERVMER34-1Q9H9K5 563 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 DLL3Q9NYJ7 618 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 RSPH14Q9UHP6 348 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 DNPEPQ9ULA0 475 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 R3HDM2Q9Y2K5 976 aaKnown RBP20.98■□□□□ 0.95
SEC13-217ENST00000482647 COQ6Q9Y2Z9 468 aa20.98■□□□□ 0.95
SEC13-217ENST00000482647 POM121BA6NF01 834 aa20.97■□□□□ 0.95
SEC13-217ENST00000482647 NPIPB15A6NHN6 443 aaPredicted RBP20.97■□□□□ 0.95
SEC13-217ENST00000482647 ANKRD66B4E2M5 251 aa20.97■□□□□ 0.95
SEC13-217ENST00000482647 RECQL5O94762 991 aaPredicted RBP20.97■□□□□ 0.95
SEC13-217ENST00000482647 HEXIM1O94992 359 aaKnown RBP20.97■□□□□ 0.95
SEC13-217ENST00000482647 MT-CYBP00156 380 aaPredicted RBP20.97■□□□□ 0.95
SEC13-217ENST00000482647 ALPIP09923 528 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms