RNA–Protein interactions for RNA: ENST00000482630.6

VEGFA-213, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-213ENST00000482630 MAN1A1P33908 653 aa25.33■■□□□ 1.65
VEGFA-213ENST00000482630 NFATC4Q14934 902 aa25.33■■□□□ 1.65
VEGFA-213ENST00000482630 DEFB133Q30KQ1 61 aa25.33■■□□□ 1.65
VEGFA-213ENST00000482630 ATP13A4Q4VNC1 1196 aa25.33■■□□□ 1.65
VEGFA-213ENST00000482630 PDCD6IPQ8WUM4 868 aaKnown RBP25.33■■□□□ 1.65
VEGFA-213ENST00000482630 GLMNQ92990 594 aa25.33■■□□□ 1.65
VEGFA-213ENST00000482630 NSMCE3Q96MG7 304 aa25.33■■□□□ 1.65
VEGFA-213ENST00000482630 LRRC61Q9BV99 259 aa25.33■■□□□ 1.65
VEGFA-213ENST00000482630 TCEAL2Q9H3H9 227 aaPredicted RBP25.33■■□□□ 1.65
VEGFA-213ENST00000482630 NOD2Q9HC29 1040 aa25.33■■□□□ 1.65
VEGFA-213ENST00000482630 PCDHGC4Q9Y5F7 938 aa25.33■■□□□ 1.65
VEGFA-213ENST00000482630 TDRD6O60522 2096 aaKnown RBP25.33■■□□□ 1.65
VEGFA-213ENST00000482630 LY6G6EA0A0G2JKS1 128 aa25.32■■□□□ 1.64
VEGFA-213ENST00000482630 MFSD11O43934 449 aa25.32■■□□□ 1.64
VEGFA-213ENST00000482630 RECQL5O94762 991 aaPredicted RBP25.32■■□□□ 1.64
VEGFA-213ENST00000482630 CPP00450 1065 aa25.32■■□□□ 1.64
VEGFA-213ENST00000482630 ADKP55263 362 aaKnown RBP25.32■■□□□ 1.64
VEGFA-213ENST00000482630 PAFAH1B3Q15102 231 aaKnown RBP25.32■■□□□ 1.64
VEGFA-213ENST00000482630 ANKRD20A8PQ5CZ79 823 aa25.32■■□□□ 1.64
VEGFA-213ENST00000482630 ZFYVE27Q5T4F4 411 aa25.32■■□□□ 1.64
VEGFA-213ENST00000482630 NCBP2-AS2Q69YL0 99 aa25.32■■□□□ 1.64
VEGFA-213ENST00000482630 ENPP7Q6UWV6 458 aa25.32■■□□□ 1.64
VEGFA-213ENST00000482630 CPNE8Q86YQ8 564 aa25.32■■□□□ 1.64
VEGFA-213ENST00000482630 FSTL5Q8N475 847 aaPredicted RBP25.32■■□□□ 1.64
VEGFA-213ENST00000482630 CCDC42Q96M95 316 aa25.32■■□□□ 1.64
VEGFA-213ENST00000482630 PNMA8BQ9ULN7 279 aaPredicted RBP25.32■■□□□ 1.64
VEGFA-213ENST00000482630 OR1A2Q9Y585 309 aa25.32■■□□□ 1.64
VEGFA-213ENST00000482630 U3KQA8 63 aa25.32■■□□□ 1.64
VEGFA-213ENST00000482630 FREM2Q5SZK8 3169 aa25.31■■□□□ 1.64
VEGFA-213ENST00000482630 LMO7DNF2Z398 122 aa25.31■■□□□ 1.64
VEGFA-213ENST00000482630 GCATO75600 419 aa25.31■■□□□ 1.64
VEGFA-213ENST00000482630 MT-CO3P00414 261 aa25.31■■□□□ 1.64
VEGFA-213ENST00000482630 ANXA6P08133 673 aa25.31■■□□□ 1.64
VEGFA-213ENST00000482630 MYF5P13349 255 aa25.31■■□□□ 1.64
VEGFA-213ENST00000482630 GARSP41250 739 aaKnown RBP25.31■■□□□ 1.64
VEGFA-213ENST00000482630 TAS2R40P59535 323 aa25.31■■□□□ 1.64
VEGFA-213ENST00000482630 MAXP61244 160 aa25.31■■□□□ 1.64
VEGFA-213ENST00000482630 GALNT2Q10471 571 aa25.31■■□□□ 1.64
VEGFA-213ENST00000482630 C1orf61Q13536 156 aa25.31■■□□□ 1.64
VEGFA-213ENST00000482630 TIGD7Q6NT04 549 aaPredicted RBP25.31■■□□□ 1.64
VEGFA-213ENST00000482630 HID1Q8IV36 788 aa25.31■■□□□ 1.64
VEGFA-213ENST00000482630 TEX26Q8N6G2 289 aa25.31■■□□□ 1.64
VEGFA-213ENST00000482630 DCBLD1Q8N8Z6 715 aa25.31■■□□□ 1.64
VEGFA-213ENST00000482630 PCDH19Q8TAB3 1148 aa25.31■■□□□ 1.64
VEGFA-213ENST00000482630 IFI44Q8TCB0 444 aa25.31■■□□□ 1.64
VEGFA-213ENST00000482630 NRSN2Q9GZP1 204 aa25.31■■□□□ 1.64
VEGFA-213ENST00000482630 ABCG4Q9H172 646 aa25.31■■□□□ 1.64
VEGFA-213ENST00000482630 NHEJ1Q9H9Q4 299 aaPredicted RBP25.31■■□□□ 1.64
VEGFA-213ENST00000482630 NT5MQ9NPB1 228 aa25.31■■□□□ 1.64
VEGFA-213ENST00000482630 HAUS2Q9NVX0 235 aa25.31■■□□□ 1.64
VEGFA-213ENST00000482630 B4GALT6Q9UBX8 382 aa25.31■■□□□ 1.64
VEGFA-213ENST00000482630 PHTF1Q9UMS5 762 aa25.31■■□□□ 1.64
VEGFA-213ENST00000482630 RAXQ9Y2V3 346 aa25.31■■□□□ 1.64
VEGFA-213ENST00000482630 ANKRD36A6QL64 1941 aa25.3■■□□□ 1.64
VEGFA-213ENST00000482630 OPA1O60313 960 aa25.3■■□□□ 1.64
VEGFA-213ENST00000482630 RASGRP1O95267 797 aa25.3■■□□□ 1.64
VEGFA-213ENST00000482630 CTSEP14091 401 aa25.3■■□□□ 1.64
VEGFA-213ENST00000482630 TSHRP16473 764 aa25.3■■□□□ 1.64
VEGFA-213ENST00000482630 RPIAP49247 311 aa25.3■■□□□ 1.64
VEGFA-213ENST00000482630 HK3P52790 923 aa25.3■■□□□ 1.64
VEGFA-213ENST00000482630 ACOX1Q15067 660 aa25.3■■□□□ 1.64
VEGFA-213ENST00000482630 ELOCQ15369 112 aa25.3■■□□□ 1.64
VEGFA-213ENST00000482630 NR0B2Q15466 257 aa25.3■■□□□ 1.64
VEGFA-213ENST00000482630 CNGA4Q8IV77 575 aa25.3■■□□□ 1.64
VEGFA-213ENST00000482630 WDR92Q96MX6 357 aa25.3■■□□□ 1.64
VEGFA-213ENST00000482630 CHP1Q99653 195 aa25.3■■□□□ 1.64
VEGFA-213ENST00000482630 BOCQ9BWV1 1114 aa25.3■■□□□ 1.64
VEGFA-213ENST00000482630 KCTD5Q9NXV2 234 aa25.3■■□□□ 1.64
VEGFA-213ENST00000482630 KLQ9UEF7 1012 aa25.3■■□□□ 1.64
VEGFA-213ENST00000482630 DOLKQ9UPQ8 538 aa25.3■■□□□ 1.64
VEGFA-213ENST00000482630 A8MX80 341 aa25.29■■□□□ 1.64
VEGFA-213ENST00000482630 CACNB4O00305 520 aaPredicted RBP25.29■■□□□ 1.64
VEGFA-213ENST00000482630 ALPIP09923 528 aa25.29■■□□□ 1.64
VEGFA-213ENST00000482630 CYP2A6P11509 494 aaPredicted RBP25.29■■□□□ 1.64
VEGFA-213ENST00000482630 VIPR1P32241 457 aa25.29■■□□□ 1.64
VEGFA-213ENST00000482630 SRP54P61011 504 aaKnown RBP25.29■■□□□ 1.64
VEGFA-213ENST00000482630 ITKQ08881 620 aa25.29■■□□□ 1.64
VEGFA-213ENST00000482630 TRAF2Q12933 501 aa25.29■■□□□ 1.64
VEGFA-213ENST00000482630 MESDQ14696 234 aa25.29■■□□□ 1.64
VEGFA-213ENST00000482630 IFI16Q16666 785 aaKnown RBP25.29■■□□□ 1.64
VEGFA-213ENST00000482630 CDKN3Q16667 212 aa25.29■■□□□ 1.64
VEGFA-213ENST00000482630 ALG11Q2TAA5 492 aa25.29■■□□□ 1.64
VEGFA-213ENST00000482630 C6orf132Q5T0Z8 1188 aa25.29■■□□□ 1.64
VEGFA-213ENST00000482630 ARMC12Q5T9G4 340 aa25.29■■□□□ 1.64
VEGFA-213ENST00000482630 PLA2G15Q8NCC3 412 aa25.29■■□□□ 1.64
VEGFA-213ENST00000482630 SLC35G2Q8TBE7 412 aa25.29■■□□□ 1.64
VEGFA-213ENST00000482630 SCG3Q8WXD2 468 aaKnown RBP25.29■■□□□ 1.64
VEGFA-213ENST00000482630 TSACCQ96A04 125 aaPredicted RBP25.29■■□□□ 1.64
VEGFA-213ENST00000482630 FAF2Q96CS3 445 aa25.29■■□□□ 1.64
VEGFA-213ENST00000482630 POLR1EQ9GZS1 481 aaKnown RBP25.29■■□□□ 1.64
VEGFA-213ENST00000482630 CLPBQ9H078 707 aa25.29■■□□□ 1.64
VEGFA-213ENST00000482630 AK5Q9Y6K8 562 aa25.29■■□□□ 1.64
VEGFA-213ENST00000482630 LRRK1Q38SD2 2015 aa25.29■■□□□ 1.64
VEGFA-213ENST00000482630 MX2P20592 715 aa25.28■■□□□ 1.64
VEGFA-213ENST00000482630 KELP23276 732 aa25.28■■□□□ 1.64
VEGFA-213ENST00000482630 ARHGAP25P42331 645 aa25.28■■□□□ 1.64
VEGFA-213ENST00000482630 KIAA1024LP59773 190 aa25.28■■□□□ 1.64
VEGFA-213ENST00000482630 RTP5Q14D33 572 aa25.28■■□□□ 1.64
VEGFA-213ENST00000482630 ESRP1Q6NXG1 681 aaKnown RBP25.28■■□□□ 1.64
VEGFA-213ENST00000482630 EFL1Q7Z2Z2 1120 aaKnown RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms