RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 TRABD2BA6NFA1 517 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 K7ESM1 405 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 PDE2AO00408 941 aaPredicted RBP11.28□□□□□ -0.6
SORT1-204ENST00000482236 RECQL5O94762 991 aaPredicted RBP11.28□□□□□ -0.6
SORT1-204ENST00000482236 TNFP01375 233 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 PTMAP06454 111 aaKnown RBP11.28□□□□□ -0.6
SORT1-204ENST00000482236 CD48P09326 243 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 VIPR1P32241 457 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 MAN1A1P33908 653 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 PFN3P60673 137 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 DYNLT1P63172 113 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 CYP4F3Q08477 520 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 NSUN2Q08J23 767 aaKnown RBP eCLIP11.28□□□□□ -0.6
SORT1-204ENST00000482236 TARDBPQ13148 414 aaKnown RBP eCLIP11.28□□□□□ -0.62e-7■□□□□ 9.9
SORT1-204ENST00000482236 MTM1Q13496 603 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 DPYSL3Q14195 570 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 INPP5AQ14642 412 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 SMAD1Q15797 465 aaKnown RBP11.28□□□□□ -0.6
SORT1-204ENST00000482236 IFI16Q16666 785 aaKnown RBP11.28□□□□□ -0.6
SORT1-204ENST00000482236 PROX2Q3B8N5 592 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 ANKRD20A8PQ5CZ79 823 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 AFMIDQ63HM1 303 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 RAET1GQ6H3X3 334 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 DPPA4Q7L190 304 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 EFL1Q7Z2Z2 1120 aaKnown RBP11.28□□□□□ -0.6
SORT1-204ENST00000482236 GKN2Q86XP6 184 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 LRRC49Q8IUZ0 686 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 CCDC50Q8IVM0 306 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 TP53INP2Q8IXH6 220 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 SLC25A45Q8N413 288 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 FSTL5Q8N475 847 aaPredicted RBP11.28□□□□□ -0.6
SORT1-204ENST00000482236 TP53I13Q8NBR0 393 aaPredicted RBP11.28□□□□□ -0.6
SORT1-204ENST00000482236 SLC35G2Q8TBE7 412 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 IFI44Q8TCB0 444 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 WDR92Q96MX6 357 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 DEPDC7Q96QD5 511 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 KLF6Q99612 283 aaPredicted RBP11.28□□□□□ -0.6
SORT1-204ENST00000482236 SEMA3CQ99985 751 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 MBNL1Q9NR56 388 aaKnown RBP11.28□□□□□ -0.6
SORT1-204ENST00000482236 B4GALT6Q9UBX8 382 aa11.28□□□□□ -0.6
SORT1-204ENST00000482236 MAP1BP46821 2468 aaKnown RBP11.27□□□□□ -0.61
SORT1-204ENST00000482236 APOL1O14791 398 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 PPP1R12AO14974 1030 aaPredicted RBP11.27□□□□□ -0.61
SORT1-204ENST00000482236 SPINT1O43278 529 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 SLC4A1P02730 911 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 MYF5P13349 255 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 CTPS1P17812 591 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 ACP1P24666 158 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 HNRNPH3P31942 346 aaKnown RBP11.27□□□□□ -0.61
SORT1-204ENST00000482236 CYLC1P35663 651 aaPredicted RBP11.27□□□□□ -0.61
SORT1-204ENST00000482236 GARSP41250 739 aaKnown RBP11.27□□□□□ -0.61
SORT1-204ENST00000482236 PEX5P50542 639 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 SRP54P61011 504 aaKnown RBP11.27□□□□□ -0.61
SORT1-204ENST00000482236 AP1B1Q10567 949 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 WSCD2Q2TBF2 565 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 RALGPS1Q5JS13 557 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 CCDC181Q5TID7 509 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 NCBP2-AS2Q69YL0 99 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 FOXR1Q6PIV2 292 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 DOK6Q6PKX4 331 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 CRTC1Q6UUV9 634 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 LRRC69Q6ZNQ3 347 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 TAF8Q7Z7C8 310 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 ZSWIM9Q86XI8 627 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 RFFLQ8WZ73 363 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 NAT6Q93015 286 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 TSACCQ96A04 125 aaPredicted RBP11.27□□□□□ -0.61
SORT1-204ENST00000482236 CENPTQ96BT3 561 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 MGME1Q9BQP7 344 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 APOOQ9BUR5 198 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 LRRC61Q9BV99 259 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 NOD2Q9HC29 1040 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 PHPT1Q9NRX4 125 aaPredicted RBP11.27□□□□□ -0.61
SORT1-204ENST00000482236 RBM22Q9NW64 420 aaKnown RBP eCLIP11.27□□□□□ -0.61
SORT1-204ENST00000482236 PHTF1Q9UMS5 762 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 CSNK1G3Q9Y6M4 447 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 EPG5Q9HCE0 2579 aa11.27□□□□□ -0.61
SORT1-204ENST00000482236 KNL1Q8NG31 2342 aa11.26□□□□□ -0.61
SORT1-204ENST00000482236 MACROD2A1Z1Q3 448 aa11.26□□□□□ -0.61
SORT1-204ENST00000482236 SRRM3A6NNA2 597 aaPredicted RBP11.26□□□□□ -0.61
SORT1-204ENST00000482236 GOLGA6L6A8MZA4 724 aa11.26□□□□□ -0.61
SORT1-204ENST00000482236 C10orf142B7Z368 130 aa11.26□□□□□ -0.61
SORT1-204ENST00000482236 RRP8O43159 456 aaKnown RBP11.26□□□□□ -0.61
SORT1-204ENST00000482236 MAFKO60675 156 aa11.26□□□□□ -0.61
SORT1-204ENST00000482236 MT-CO3P00414 261 aa11.26□□□□□ -0.61
SORT1-204ENST00000482236 CKMT1AP12532 417 aa11.26□□□□□ -0.61
SORT1-204ENST00000482236 TSHRP16473 764 aa11.26□□□□□ -0.61
SORT1-204ENST00000482236 ZFXP17010 805 aaPredicted RBP11.26□□□□□ -0.61
SORT1-204ENST00000482236 ARHGAP25P42331 645 aa11.26□□□□□ -0.61
SORT1-204ENST00000482236 HK3P52790 923 aa11.26□□□□□ -0.61
SORT1-204ENST00000482236 TAS2R40P59535 323 aa11.26□□□□□ -0.61
SORT1-204ENST00000482236 GALNT2Q10471 571 aa11.26□□□□□ -0.61
SORT1-204ENST00000482236 EIF2B5Q13144 721 aaKnown RBP11.26□□□□□ -0.61
SORT1-204ENST00000482236 ATP13A4Q4VNC1 1196 aa11.26□□□□□ -0.61
SORT1-204ENST00000482236 PROSER1Q86XN7 944 aa11.26□□□□□ -0.61
SORT1-204ENST00000482236 RHOT1Q8IXI2 618 aa11.26□□□□□ -0.61
SORT1-204ENST00000482236 CCDC13Q8IYE1 715 aa11.26□□□□□ -0.61
SORT1-204ENST00000482236 LPCAT1Q8NF37 534 aa11.26□□□□□ -0.61
SORT1-204ENST00000482236 OR56A4Q8NGH8 313 aa11.26□□□□□ -0.61
SORT1-204ENST00000482236 PCDH19Q8TAB3 1148 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms