RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 SHBQ15464 509 aa5.88□□□□□ -1.47
SF3B1-210ENST00000482158 C2orf68Q2NKX9 166 aa5.88□□□□□ -1.47
SF3B1-210ENST00000482158 KLHL24Q6TFL4 600 aa5.88□□□□□ -1.47
SF3B1-210ENST00000482158 Q6ZTK2 550 aa5.88□□□□□ -1.47
SF3B1-210ENST00000482158 ARHGAP12Q8IWW6 846 aa5.88□□□□□ -1.47
SF3B1-210ENST00000482158 HUS1BQ8NHY5 278 aa5.88□□□□□ -1.47
SF3B1-210ENST00000482158 SMARCE1Q969G3 411 aa5.88□□□□□ -1.47
SF3B1-210ENST00000482158 ERGIC1Q969X5 290 aa5.88□□□□□ -1.47
SF3B1-210ENST00000482158 PPP1R13BQ96KQ4 1090 aa5.88□□□□□ -1.47
SF3B1-210ENST00000482158 ZNF48Q96MX3 618 aaPredicted RBP5.88□□□□□ -1.47
SF3B1-210ENST00000482158 BPIFA1Q9NP55 256 aa5.88□□□□□ -1.47
SF3B1-210ENST00000482158 EIF2B3Q9NR50 452 aaKnown RBP5.88□□□□□ -1.47
SF3B1-210ENST00000482158 EHD2Q9NZN4 543 aa5.88□□□□□ -1.47
SF3B1-210ENST00000482158 CNOT8Q9UFF9 292 aaKnown RBP5.88□□□□□ -1.47
SF3B1-210ENST00000482158 LAS1LQ9Y4W2 734 aaKnown RBP5.88□□□□□ -1.47
SF3B1-210ENST00000482158 FAM237AA0A1B0GTK4 181 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 A6NCN8 305 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 RGS14O43566 566 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 TIPRLO75663 272 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 OR2C1O95371 312 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 SYF2O95926 243 aaKnown RBP5.87□□□□□ -1.47
SF3B1-210ENST00000482158 CYP1A2P05177 515 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 CDH2P19022 906 aaPredicted RBP5.87□□□□□ -1.47
SF3B1-210ENST00000482158 F2RL1P55085 397 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 CTTNQ14247 550 aaKnown RBP5.87□□□□□ -1.47
SF3B1-210ENST00000482158 MON1BQ7L1V2 547 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 HAPLN4Q86UW8 402 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 PIM3Q86V86 326 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 CCDC105Q8IYK2 499 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 TTC39CQ8N584 583 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 ZBTB2Q8N680 514 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 PDILTQ8N807 584 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 SLC41A2Q96JW4 573 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 SLITRK1Q96PX8 696 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 SDF4Q9BRK5 362 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 ESRP2Q9H6T0 727 aaKnown RBP5.87□□□□□ -1.47
SF3B1-210ENST00000482158 CATSPERBQ9H7T0 1116 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 TERF2IPQ9NYB0 399 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 CISD1Q9NZ45 108 aaKnown RBP5.87□□□□□ -1.47
SF3B1-210ENST00000482158 TBC1D29Q9UFV1 150 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 GPR34Q9UPC5 381 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 AAR2Q9Y312 384 aaKnown RBP5.87□□□□□ -1.47
SF3B1-210ENST00000482158 LYVE1Q9Y5Y7 322 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 CEPT1Q9Y6K0 416 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 ZNF521Q96K83 1311 aa5.87□□□□□ -1.47
SF3B1-210ENST00000482158 RSF1Q96T23 1441 aaPredicted RBP5.86□□□□□ -1.47
SF3B1-210ENST00000482158 RPS10-NUDT3A0A1W2PQS6 291 aa5.86□□□□□ -1.47
SF3B1-210ENST00000482158 FRMD3A2A2Y4 597 aa5.86□□□□□ -1.47
SF3B1-210ENST00000482158 AGAP14A8MT82 685 aa5.86□□□□□ -1.47
SF3B1-210ENST00000482158 TNFRSF13BO14836 293 aaPredicted RBP5.86□□□□□ -1.47
SF3B1-210ENST00000482158 LDHCP07864 332 aa5.86□□□□□ -1.47
SF3B1-210ENST00000482158 IL7RP16871 459 aa5.86□□□□□ -1.47
SF3B1-210ENST00000482158 CHATP28329 748 aa5.86□□□□□ -1.47
SF3B1-210ENST00000482158 PIGAP37287 484 aa5.86□□□□□ -1.47
SF3B1-210ENST00000482158 UBA7P41226 1012 aa5.86□□□□□ -1.47
SF3B1-210ENST00000482158 GARSP41250 739 aaKnown RBP5.86□□□□□ -1.47
SF3B1-210ENST00000482158 RFX2P48378 723 aa5.86□□□□□ -1.47
SF3B1-210ENST00000482158 GPS2Q13227 327 aa5.86□□□□□ -1.47
SF3B1-210ENST00000482158 DRAP1Q14919 205 aaPredicted RBP5.86□□□□□ -1.47
SF3B1-210ENST00000482158 DCAF6Q58WW2 860 aa5.86□□□□□ -1.47
SF3B1-210ENST00000482158 DLK2Q6UY11 383 aa5.86□□□□□ -1.47
SF3B1-210ENST00000482158 MTSS1LQ765P7 747 aa5.86□□□□□ -1.47
SF3B1-210ENST00000482158 LINGO2Q7L985 606 aa5.86□□□□□ -1.47
SF3B1-210ENST00000482158 BEST2Q8NFU1 509 aa5.86□□□□□ -1.47
SF3B1-210ENST00000482158 CAMK1GQ96NX5 476 aa5.86□□□□□ -1.47
SF3B1-210ENST00000482158 FAM110AQ9BQ89 295 aa5.86□□□□□ -1.47
SF3B1-210ENST00000482158 MKKSQ9NPJ1 570 aaPredicted RBP5.86□□□□□ -1.47
SF3B1-210ENST00000482158 TMEM51Q9NW97 253 aa5.86□□□□□ -1.47
SF3B1-210ENST00000482158 DLGAP2Q9P1A6 1054 aa5.86□□□□□ -1.47
SF3B1-210ENST00000482158 FBXO2Q9UK22 296 aaPredicted RBP5.86□□□□□ -1.47
SF3B1-210ENST00000482158 SRPRBQ9Y5M8 271 aaKnown RBP5.86□□□□□ -1.47
SF3B1-210ENST00000482158 A0A1B0GVT2 93 aa5.85□□□□□ -1.47
SF3B1-210ENST00000482158 KDM4EB2RXH2 506 aaPredicted RBP5.85□□□□□ -1.47
SF3B1-210ENST00000482158 INAFM1C9JVW0 142 aa5.85□□□□□ -1.47
SF3B1-210ENST00000482158 OVOL3O00110 214 aa5.85□□□□□ -1.47
SF3B1-210ENST00000482158 GTPBP1O00178 669 aaKnown RBP5.85□□□□□ -1.47
SF3B1-210ENST00000482158 SPRY3O43610 288 aa5.85□□□□□ -1.47
SF3B1-210ENST00000482158 NIPAL4Q0D2K0 466 aa5.85□□□□□ -1.47
SF3B1-210ENST00000482158 ST3GAL1Q11201 340 aa5.85□□□□□ -1.47
SF3B1-210ENST00000482158 FOXD4Q12950 439 aaPredicted RBP5.85□□□□□ -1.47
SF3B1-210ENST00000482158 PRKG2Q13237 762 aa5.85□□□□□ -1.47
SF3B1-210ENST00000482158 ITGADQ13349 1161 aa5.85□□□□□ -1.47
SF3B1-210ENST00000482158 PLEKHA7Q6IQ23 1121 aa5.85□□□□□ -1.47
SF3B1-210ENST00000482158 KLHL35Q6PF15 583 aa5.85□□□□□ -1.47
SF3B1-210ENST00000482158 TECPR1Q7Z6L1 1165 aa5.85□□□□□ -1.47
SF3B1-210ENST00000482158 KCNN2Q9H2S1 579 aa5.85□□□□□ -1.47
SF3B1-210ENST00000482158 PDZD7Q9H5P4 517 aa5.85□□□□□ -1.47
SF3B1-210ENST00000482158 RNF7Q9UBF6 113 aa5.85□□□□□ -1.47
SF3B1-210ENST00000482158 SWAP70Q9UH65 585 aa5.85□□□□□ -1.47
SF3B1-210ENST00000482158 INSL5Q9Y5Q6 135 aa5.85□□□□□ -1.47
SF3B1-210ENST00000482158 A8MZ25 164 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 HMGB1P1B2RPK0 211 aaPredicted RBP5.84□□□□□ -1.47
SF3B1-210ENST00000482158 BTBD18B2RXH4 712 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 B4DGG1 531 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 AP3D1O14617 1153 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 TIMM23O14925 209 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 NKX2-2O95096 273 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 FTCDO95954 541 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 PLCD1P51178 756 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 NAP1L1P55209 391 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms