RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 FOXR2Q6PJQ5 311 aa15.04■□□□□ -0
HDAC6-224ENST00000481929 LEKR1Q6ZMV7 388 aa15.04■□□□□ -0
HDAC6-224ENST00000481929 C1orf131Q8NDD1 294 aaKnown RBP15.04■□□□□ -0
HDAC6-224ENST00000481929 CCL4L1Q8NHW4 92 aa15.04■□□□□ -0
HDAC6-224ENST00000481929 SPATA32Q96LK8 384 aa15.04■□□□□ -0
HDAC6-224ENST00000481929 CEP63Q96MT8 703 aa15.04■□□□□ -0
HDAC6-224ENST00000481929 TBCBQ99426 244 aa15.04■□□□□ -0
HDAC6-224ENST00000481929 INTS2Q9H0H0 1204 aaKnown RBP15.04■□□□□ -0
HDAC6-224ENST00000481929 MRPL40Q9NQ50 206 aaKnown RBP15.04■□□□□ -0
HDAC6-224ENST00000481929 CUEDC1Q9NWM3 386 aaPredicted RBP15.04■□□□□ -0
HDAC6-224ENST00000481929 PPARGC1AQ9UBK2 798 aaKnown RBP15.04■□□□□ -0
HDAC6-224ENST00000481929 KCTD3Q9Y597 815 aa15.04■□□□□ -0
HDAC6-224ENST00000481929 TNFRSF10CO14798 259 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 IGSF6O95976 241 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 PRKCGP05129 697 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 THRAP10827 490 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 USP8P40818 1118 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 GPR3P46089 330 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 AGERQ15109 404 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 TSR1Q2NL82 804 aaKnown RBP15.03■□□□□ -0
HDAC6-224ENST00000481929 PTPN20Q4JDL3 420 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 ATP1A1-AS1Q5TC04 95 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 ASB18Q6ZVZ8 466 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 ENOSF1Q7L5Y1 443 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 KDELC2Q7Z4H8 507 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 CCDC13Q8IYE1 715 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 UNC5BQ8IZJ1 945 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 ZDHHC1Q8WTX9 485 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 NT5C3BQ969T7 300 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 HMCESQ96FZ2 354 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 DPYSL5Q9BPU6 564 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 TTYH3Q9C0H2 523 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 ZMYND15Q9H091 742 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 CYP4F12Q9HCS2 524 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 OCIAD1Q9NX40 245 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 MOSPD1Q9UJG1 213 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 PCDHGC3Q9UN70 934 aa15.03■□□□□ -0
HDAC6-224ENST00000481929 TTLL8A6PVC2 850 aa15.02■□□□□ -0
HDAC6-224ENST00000481929 K7EM74 188 aa15.02■□□□□ -0
HDAC6-224ENST00000481929 SEMA7AO75326 666 aa15.02■□□□□ -0
HDAC6-224ENST00000481929 TMCC1O94876 653 aa15.02■□□□□ -0
HDAC6-224ENST00000481929 ZNF202O95125 648 aa15.02■□□□□ -0
HDAC6-224ENST00000481929 RNF224P0DH78 156 aa15.02■□□□□ -0
HDAC6-224ENST00000481929 MAN1A1P33908 653 aa15.02■□□□□ -0
HDAC6-224ENST00000481929 MAPKAPK2P49137 400 aa15.02■□□□□ -0
HDAC6-224ENST00000481929 LIG3P49916 1009 aa15.02■□□□□ -0
HDAC6-224ENST00000481929 RIPPLY3P57055 190 aa15.02■□□□□ -0
HDAC6-224ENST00000481929 ABHD18Q0P651 414 aa15.02■□□□□ -0
HDAC6-224ENST00000481929 SLC25A52Q3SY17 297 aa15.02■□□□□ -0
HDAC6-224ENST00000481929 CRTC2Q53ET0 693 aaPredicted RBP15.02■□□□□ -0
HDAC6-224ENST00000481929 ERAP2Q6P179 960 aa15.02■□□□□ -0
HDAC6-224ENST00000481929 C17orf82Q86X59 251 aaPredicted RBP15.02■□□□□ -0
HDAC6-224ENST00000481929 ZDHHC17Q8IUH5 632 aa15.02■□□□□ -0
HDAC6-224ENST00000481929 PLA2G15Q8NCC3 412 aa15.02■□□□□ -0
HDAC6-224ENST00000481929 FUBP1Q96AE4 644 aaKnown RBP15.02■□□□□ -0
HDAC6-224ENST00000481929 NCAPGQ9BPX3 1015 aa15.02■□□□□ -0
HDAC6-224ENST00000481929 MAGEH1Q9H213 219 aa15.02■□□□□ -0
HDAC6-224ENST00000481929 PCDH12Q9NPG4 1184 aa15.02■□□□□ -0
HDAC6-224ENST00000481929 SPATS2LQ9NUQ6 558 aaKnown RBP15.02■□□□□ -0
HDAC6-224ENST00000481929 NDFIP2Q9NV92 336 aa15.02■□□□□ -0
HDAC6-224ENST00000481929 MFHAS1Q9Y4C4 1052 aa15.02■□□□□ -0
HDAC6-224ENST00000481929 KCNMB2Q9Y691 235 aa15.02■□□□□ -0
HDAC6-224ENST00000481929 ESPL1Q14674 2120 aa15.02□□□□□ -0.01
HDAC6-224ENST00000481929 ANKRD36A6QL64 1941 aa15.02□□□□□ -0.01
HDAC6-224ENST00000481929 ZSCAN5CA6NGD5 496 aaPredicted RBP15.01□□□□□ -0.01
HDAC6-224ENST00000481929 BUB1O43683 1085 aa15.01□□□□□ -0.01
HDAC6-224ENST00000481929 DDAH2O95865 285 aa15.01□□□□□ -0.01
HDAC6-224ENST00000481929 CCNB1P14635 433 aa15.01□□□□□ -0.01
HDAC6-224ENST00000481929 MPSTP25325 297 aa15.01□□□□□ -0.01
HDAC6-224ENST00000481929 STAT1P42224 750 aa15.01□□□□□ -0.01
HDAC6-224ENST00000481929 NOP2P46087 812 aaKnown RBP15.01□□□□□ -0.01
HDAC6-224ENST00000481929 RHOAP61586 193 aa15.01□□□□□ -0.01
HDAC6-224ENST00000481929 PNOCQ13519 176 aa15.01□□□□□ -0.01
HDAC6-224ENST00000481929 UGP2Q16851 508 aa15.01□□□□□ -0.01
HDAC6-224ENST00000481929 NKAIN2Q5VXU1 208 aa15.01□□□□□ -0.01
HDAC6-224ENST00000481929 FAM131BQ86XD5 332 aa15.01□□□□□ -0.01
HDAC6-224ENST00000481929 ZNF354CQ86Y25 554 aa15.01□□□□□ -0.01
HDAC6-224ENST00000481929 RTP4Q96DX8 246 aa15.01□□□□□ -0.01
HDAC6-224ENST00000481929 GSDMCQ9BYG8 508 aa15.01□□□□□ -0.01
HDAC6-224ENST00000481929 SPRY4Q9C004 299 aa15.01□□□□□ -0.01
HDAC6-224ENST00000481929 TRIT1Q9H3H1 467 aaKnown RBP15.01□□□□□ -0.01
HDAC6-224ENST00000481929 DNAI1Q9UI46 699 aa15.01□□□□□ -0.01
HDAC6-224ENST00000481929 CELSR2Q9HCU4 2923 aa15.01□□□□□ -0.01
HDAC6-224ENST00000481929 IGHV1OR21-1A0A087WYE8 117 aa15□□□□□ -0.01
HDAC6-224ENST00000481929 PRSS38A1L453 326 aa15□□□□□ -0.01
HDAC6-224ENST00000481929 BECN2A8MW95 431 aa15□□□□□ -0.01
HDAC6-224ENST00000481929 PSMA7O14818 248 aa15□□□□□ -0.01
HDAC6-224ENST00000481929 RAMP2O60895 175 aa15□□□□□ -0.01
HDAC6-224ENST00000481929 KRT38O76015 456 aa15□□□□□ -0.01
HDAC6-224ENST00000481929 ECEL1O95672 775 aa15□□□□□ -0.01
HDAC6-224ENST00000481929 FGF1P05230 155 aa15□□□□□ -0.01
HDAC6-224ENST00000481929 HOXC4P09017 264 aaPredicted RBP15□□□□□ -0.01
HDAC6-224ENST00000481929 TNFRSF8P28908 595 aa15□□□□□ -0.01
HDAC6-224ENST00000481929 CSF2RBP32927 897 aa15□□□□□ -0.01
HDAC6-224ENST00000481929 MMP12P39900 470 aa15□□□□□ -0.01
HDAC6-224ENST00000481929 DCTP40126 519 aa15□□□□□ -0.01
HDAC6-224ENST00000481929 ILF3Q12906 894 aaKnown RBP eCLIP15□□□□□ -0.01
HDAC6-224ENST00000481929 STIM1Q13586 685 aa15□□□□□ -0.01
HDAC6-224ENST00000481929 CFAP58Q5T655 872 aa15□□□□□ -0.01
HDAC6-224ENST00000481929 RWDD4Q6NW29 188 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms