RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 NCKIPSDQ9NZQ3 722 aa18.66■□□□□ 0.58
CLK1-211ENST00000481641 GULP1Q9UBP9 304 aa18.66■□□□□ 0.58
CLK1-211ENST00000481641 SEPT3Q9UH03 358 aa18.66■□□□□ 0.58
CLK1-211ENST00000481641 DOLKQ9UPQ8 538 aa18.66■□□□□ 0.58
CLK1-211ENST00000481641 SHROOM3Q8TF72 1996 aa18.65■□□□□ 0.58
CLK1-211ENST00000481641 A0A1W2PNU3 283 aaPredicted RBP18.65■□□□□ 0.58
CLK1-211ENST00000481641 TMEM110-MUSTN1A8MSY1 372 aa18.65■□□□□ 0.58
CLK1-211ENST00000481641 PEX11BO96011 259 aa18.65■□□□□ 0.58
CLK1-211ENST00000481641 CTSEP14091 401 aa18.65■□□□□ 0.58
CLK1-211ENST00000481641 GM2AP17900 193 aa18.65■□□□□ 0.58
CLK1-211ENST00000481641 ARL4AP40617 200 aa18.65■□□□□ 0.58
CLK1-211ENST00000481641 ZNF135P52742 658 aaPredicted RBP18.65■□□□□ 0.58
CLK1-211ENST00000481641 UBASH3AP57075 661 aa18.65■□□□□ 0.58
CLK1-211ENST00000481641 SRP54P61011 504 aaKnown RBP18.65■□□□□ 0.58
CLK1-211ENST00000481641 AGERQ15109 404 aa18.65■□□□□ 0.58
CLK1-211ENST00000481641 BOLA3Q53S33 107 aa18.65■□□□□ 0.58
CLK1-211ENST00000481641 TMCO4Q5TGY1 634 aa18.65■□□□□ 0.58
CLK1-211ENST00000481641 TMCO3Q6UWJ1 677 aa18.65■□□□□ 0.58
CLK1-211ENST00000481641 DPPA4Q7L190 304 aa18.65■□□□□ 0.58
CLK1-211ENST00000481641 PELI3Q8N2H9 469 aa18.65■□□□□ 0.58
CLK1-211ENST00000481641 LZTR1Q8N653 840 aa18.65■□□□□ 0.58
CLK1-211ENST00000481641 PCDH19Q8TAB3 1148 aa18.65■□□□□ 0.58
CLK1-211ENST00000481641 GLMNQ92990 594 aa18.65■□□□□ 0.58
CLK1-211ENST00000481641 FUBP1Q96AE4 644 aaKnown RBP18.65■□□□□ 0.58
CLK1-211ENST00000481641 ATXN7L3BQ96GX2 97 aa18.65■□□□□ 0.58
CLK1-211ENST00000481641 CSPG4P5Q96PW8 444 aa18.65■□□□□ 0.58
CLK1-211ENST00000481641 PSKH2Q96QS6 385 aa18.65■□□□□ 0.58
CLK1-211ENST00000481641 KLQ9UEF7 1012 aa18.65■□□□□ 0.58
CLK1-211ENST00000481641 PADI4Q9UM07 663 aa18.65■□□□□ 0.58
CLK1-211ENST00000481641 PCDHGC4Q9Y5F7 938 aa18.65■□□□□ 0.58
CLK1-211ENST00000481641 SMG1Q96Q15 3661 aaKnown RBP18.65■□□□□ 0.58
CLK1-211ENST00000481641 A0A087X0T9 212 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 A0A1W2PQJ5 194 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 PMS2P1A4D2B8 440 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 RASGRP1O95267 797 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 ELFN1P0C7U0 828 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 FAM228BP0C875 321 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 HTR1BP28222 390 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 RPIAP49247 311 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 BLKP51451 505 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 RENBPP51606 427 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 AP1S1P61966 158 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 MTM1Q13496 603 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 ZNF235Q14590 738 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 ACAP1Q15027 740 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 ELOCQ15369 112 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 C3orf38Q5JPI3 329 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 ESRP1Q6NXG1 681 aaKnown RBP18.64■□□□□ 0.57
CLK1-211ENST00000481641 CPNE8Q86YQ8 564 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 FSTL5Q8N475 847 aaPredicted RBP18.64■□□□□ 0.57
CLK1-211ENST00000481641 KYQ8NBH2 561 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 OR1E3Q8WZA6 343 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 PDXPQ96GD0 296 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 WDR92Q96MX6 357 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 CCDC3Q9BQI4 270 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 NUP85Q9BW27 656 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 PRORYQ9H606 182 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 SYNDIG1Q9H7V2 258 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 PCDH18Q9HCL0 1135 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 MRPL40Q9NQ50 206 aaKnown RBP18.64■□□□□ 0.57
CLK1-211ENST00000481641 B4GALT6Q9UBX8 382 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 RABGEF1Q9UJ41 708 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 ANAPC7Q9UJX3 599 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 SATB2Q9UPW6 733 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 ENTPD2Q9Y5L3 495 aa18.64■□□□□ 0.57
CLK1-211ENST00000481641 FASNP49327 2511 aaKnown RBP18.64■□□□□ 0.57
CLK1-211ENST00000481641 BAHCC1Q9P281 2608 aa18.63■□□□□ 0.57
CLK1-211ENST00000481641 TMEM202A6NGA9 273 aa18.63■□□□□ 0.57
CLK1-211ENST00000481641 MAFKO60675 156 aa18.63■□□□□ 0.57
CLK1-211ENST00000481641 SERPING1P05155 500 aa18.63■□□□□ 0.57
CLK1-211ENST00000481641 LSSP48449 732 aa18.63■□□□□ 0.57
CLK1-211ENST00000481641 MAXP61244 160 aa18.63■□□□□ 0.57
CLK1-211ENST00000481641 TPM4P67936 248 aa18.63■□□□□ 0.57
CLK1-211ENST00000481641 SLC25A11Q02978 314 aaKnown RBP18.63■□□□□ 0.57
CLK1-211ENST00000481641 MMRN1Q13201 1228 aa18.63■□□□□ 0.57
CLK1-211ENST00000481641 PIGHQ14442 188 aaPredicted RBP18.63■□□□□ 0.57
CLK1-211ENST00000481641 ACOX1Q15067 660 aa18.63■□□□□ 0.57
CLK1-211ENST00000481641 PTPRRQ15256 657 aa18.63■□□□□ 0.57
CLK1-211ENST00000481641 NFKBIBQ15653 356 aa18.63■□□□□ 0.57
CLK1-211ENST00000481641 RBM44Q6ZP01 1051 aaKnown RBP18.63■□□□□ 0.57
CLK1-211ENST00000481641 SPACA3Q8IXA5 215 aa18.63■□□□□ 0.57
CLK1-211ENST00000481641 PDCD6IPQ8WUM4 868 aaKnown RBP18.63■□□□□ 0.57
CLK1-211ENST00000481641 SYN2Q92777 582 aaPredicted RBP18.63■□□□□ 0.57
CLK1-211ENST00000481641 ZNF599Q96NL3 588 aa18.63■□□□□ 0.57
CLK1-211ENST00000481641 LGR4Q9BXB1 951 aa18.63■□□□□ 0.57
CLK1-211ENST00000481641 POLR1BQ9H9Y6 1135 aa18.63■□□□□ 0.57
CLK1-211ENST00000481641 NOD2Q9HC29 1040 aa18.63■□□□□ 0.57
CLK1-211ENST00000481641 GPR34Q9UPC5 381 aa18.63■□□□□ 0.57
CLK1-211ENST00000481641 BZW2Q9Y6E2 419 aaKnown RBP18.63■□□□□ 0.57
CLK1-211ENST00000481641 CFAP69A5D8W1 941 aa18.62■□□□□ 0.57
CLK1-211ENST00000481641 TNFP01375 233 aa18.62■□□□□ 0.57
CLK1-211ENST00000481641 CYP1A2P05177 515 aa18.62■□□□□ 0.57
CLK1-211ENST00000481641 CD48P09326 243 aa18.62■□□□□ 0.57
CLK1-211ENST00000481641 ALPIP09923 528 aa18.62■□□□□ 0.57
CLK1-211ENST00000481641 CR2P20023 1033 aa18.62■□□□□ 0.57
CLK1-211ENST00000481641 POLR2LP62875 67 aaKnown RBP18.62■□□□□ 0.57
CLK1-211ENST00000481641 ZBED6P86452 979 aa18.62■□□□□ 0.57
CLK1-211ENST00000481641 DENND2CQ68D51 928 aa18.62■□□□□ 0.57
CLK1-211ENST00000481641 FOXR1Q6PIV2 292 aa18.62■□□□□ 0.57
CLK1-211ENST00000481641 GKN2Q86XP6 184 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms