RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 EIF3CLB5ME19 914 aaKnown RBP18.94■□□□□ 0.62
ABCF3-214ENST00000480562 GOLGA6L22H0YM25 854 aa18.94■□□□□ 0.62
ABCF3-214ENST00000480562 RNF8O76064 485 aa18.94■□□□□ 0.62
ABCF3-214ENST00000480562 RECQL5O94762 991 aaPredicted RBP18.94■□□□□ 0.62
ABCF3-214ENST00000480562 FTLP02792 175 aaPredicted RBP18.94■□□□□ 0.62
ABCF3-214ENST00000480562 TMPRSS3P57727 454 aa18.94■□□□□ 0.62
ABCF3-214ENST00000480562 BCL2L1Q07817 233 aa18.94■□□□□ 0.62
ABCF3-214ENST00000480562 MTM1Q13496 603 aa18.94■□□□□ 0.62
ABCF3-214ENST00000480562 AGERQ15109 404 aa18.94■□□□□ 0.62
ABCF3-214ENST00000480562 ANO6Q4KMQ2 910 aa18.94■□□□□ 0.62
ABCF3-214ENST00000480562 LVRNQ6Q4G3 990 aa18.94■□□□□ 0.62
ABCF3-214ENST00000480562 IGF2-ASQ6U949 168 aa18.94■□□□□ 0.62
ABCF3-214ENST00000480562 PCSK4Q6UW60 755 aa18.94■□□□□ 0.62
ABCF3-214ENST00000480562 ZNF571Q7Z3V5 609 aaPredicted RBP18.94■□□□□ 0.62
ABCF3-214ENST00000480562 GKN2Q86XP6 184 aa18.94■□□□□ 0.62
ABCF3-214ENST00000480562 WDR48Q8TAF3 677 aa18.94■□□□□ 0.62
ABCF3-214ENST00000480562 PDXPQ96GD0 296 aa18.94■□□□□ 0.62
ABCF3-214ENST00000480562 NSMCE3Q96MG7 304 aa18.94■□□□□ 0.62
ABCF3-214ENST00000480562 EIF3CQ99613 913 aaKnown RBP18.94■□□□□ 0.62
ABCF3-214ENST00000480562 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.94■□□□□ 0.62
ABCF3-214ENST00000480562 CNOT8Q9UFF9 292 aaKnown RBP18.94■□□□□ 0.62
ABCF3-214ENST00000480562 PCDHGA8Q9Y5G5 932 aa18.94■□□□□ 0.62
ABCF3-214ENST00000480562 TTC24A2A3L6 582 aaPredicted RBP18.93■□□□□ 0.62
ABCF3-214ENST00000480562 DDX3XO00571 662 aaKnown RBP eCLIP18.93■□□□□ 0.62
ABCF3-214ENST00000480562 NTN3O00634 580 aaPredicted RBP18.93■□□□□ 0.62
ABCF3-214ENST00000480562 TNFSF15O95150 251 aa18.93■□□□□ 0.62
ABCF3-214ENST00000480562 TNFP01375 233 aa18.93■□□□□ 0.62
ABCF3-214ENST00000480562 SCNN1BP51168 640 aa18.93■□□□□ 0.62
ABCF3-214ENST00000480562 CCL7P80098 99 aa18.93■□□□□ 0.62
ABCF3-214ENST00000480562 IL10RBQ08334 325 aa18.93■□□□□ 0.62
ABCF3-214ENST00000480562 LIPIQ6XZB0 460 aa18.93■□□□□ 0.62
ABCF3-214ENST00000480562 B3GNT8Q7Z7M8 397 aa18.93■□□□□ 0.62
ABCF3-214ENST00000480562 SDR16C5Q8N3Y7 309 aa18.93■□□□□ 0.62
ABCF3-214ENST00000480562 ATL2Q8NHH9 583 aa18.93■□□□□ 0.62
ABCF3-214ENST00000480562 WDR36Q8NI36 951 aaKnown RBP18.93■□□□□ 0.62
ABCF3-214ENST00000480562 OR1E3Q8WZA6 343 aa18.93■□□□□ 0.62
ABCF3-214ENST00000480562 FUBP1Q96AE4 644 aaKnown RBP18.93■□□□□ 0.62
ABCF3-214ENST00000480562 ZNF653Q96CK0 615 aa18.93■□□□□ 0.62
ABCF3-214ENST00000480562 ECHDC3Q96DC8 303 aa18.93■□□□□ 0.62
ABCF3-214ENST00000480562 DPH1Q9BZG8 443 aa18.93■□□□□ 0.62
ABCF3-214ENST00000480562 CWC15Q9P013 229 aaKnown RBP18.93■□□□□ 0.62
ABCF3-214ENST00000480562 ANKRD36A6QL64 1941 aa18.93■□□□□ 0.62
ABCF3-214ENST00000480562 LRP4O75096 1905 aa18.93■□□□□ 0.62
ABCF3-214ENST00000480562 CCDC187A0A096LP49 1063 aa18.92■□□□□ 0.62
ABCF3-214ENST00000480562 CFAP69A5D8W1 941 aa18.92■□□□□ 0.62
ABCF3-214ENST00000480562 TMEM202A6NGA9 273 aa18.92■□□□□ 0.62
ABCF3-214ENST00000480562 LRCH4O75427 683 aa18.92■□□□□ 0.62
ABCF3-214ENST00000480562 ELFN1P0C7U0 828 aa18.92■□□□□ 0.62
ABCF3-214ENST00000480562 UCNP55089 124 aa18.92■□□□□ 0.62
ABCF3-214ENST00000480562 NSUN2Q08J23 767 aaKnown RBP eCLIP18.92■□□□□ 0.62
ABCF3-214ENST00000480562 DPYSQ14117 519 aa18.92■□□□□ 0.62
ABCF3-214ENST00000480562 RFTN1Q14699 578 aaPredicted RBP18.92■□□□□ 0.62
ABCF3-214ENST00000480562 ARL14Q8N4G2 192 aa18.92■□□□□ 0.62
ABCF3-214ENST00000480562 LSM14AQ8ND56 463 aaKnown RBP18.92■□□□□ 0.62
ABCF3-214ENST00000480562 FNIP1Q8TF40 1166 aa18.92■□□□□ 0.62
ABCF3-214ENST00000480562 RBM15Q96T37 977 aaKnown RBP eCLIP18.92■□□□□ 0.62
ABCF3-214ENST00000480562 NAT10Q9H0A0 1025 aaKnown RBP18.92■□□□□ 0.62
ABCF3-214ENST00000480562 FGF22Q9HCT0 170 aa18.92■□□□□ 0.62
ABCF3-214ENST00000480562 MRPL40Q9NQ50 206 aaKnown RBP18.92■□□□□ 0.62
ABCF3-214ENST00000480562 TMEM63CQ9P1W3 806 aa18.92■□□□□ 0.62
ABCF3-214ENST00000480562 MYO1AQ9UBC5 1043 aa18.92■□□□□ 0.62
ABCF3-214ENST00000480562 ATMQ13315 3056 aa18.92■□□□□ 0.62
ABCF3-214ENST00000480562 HELZ2Q9BYK8 2649 aaKnown RBP18.92■□□□□ 0.62
ABCF3-214ENST00000480562 CFAP46Q8IYW2 2715 aa18.92■□□□□ 0.62
ABCF3-214ENST00000480562 CDRT15L2A8MXV6 281 aa18.91■□□□□ 0.62
ABCF3-214ENST00000480562 CACNB4O00305 520 aaPredicted RBP18.91■□□□□ 0.62
ABCF3-214ENST00000480562 TRAFD1O14545 582 aaPredicted RBP18.91■□□□□ 0.62
ABCF3-214ENST00000480562 MBD3O95983 291 aa18.91■□□□□ 0.62
ABCF3-214ENST00000480562 GZMAP12544 262 aa18.91■□□□□ 0.62
ABCF3-214ENST00000480562 SKILP12757 684 aa18.91■□□□□ 0.62
ABCF3-214ENST00000480562 GM2AP17900 193 aa18.91■□□□□ 0.62
ABCF3-214ENST00000480562 SKOR1P84550 965 aa18.91■□□□□ 0.62
ABCF3-214ENST00000480562 SLC10A7Q0GE19 358 aa18.91■□□□□ 0.62
ABCF3-214ENST00000480562 LBRQ14739 615 aaKnown RBP18.91■□□□□ 0.62
ABCF3-214ENST00000480562 ACOX1Q15067 660 aa18.91■□□□□ 0.62
ABCF3-214ENST00000480562 TAF1BQ53T94 588 aaPredicted RBP18.91■□□□□ 0.62
ABCF3-214ENST00000480562 DPPA4Q7L190 304 aa18.91■□□□□ 0.62
ABCF3-214ENST00000480562 TAF8Q7Z7C8 310 aa18.91■□□□□ 0.62
ABCF3-214ENST00000480562 SFTPA2Q8IWL1 248 aa18.91■□□□□ 0.62
ABCF3-214ENST00000480562 GFM1Q96RP9 751 aaKnown RBP18.91■□□□□ 0.62
ABCF3-214ENST00000480562 FOXP3Q9BZS1 431 aa18.91■□□□□ 0.62
ABCF3-214ENST00000480562 EPB41L5Q9HCM4 733 aa18.91■□□□□ 0.62
ABCF3-214ENST00000480562 AIPL1Q9NZN9 384 aa18.91■□□□□ 0.62
ABCF3-214ENST00000480562 SEPT3Q9UH03 358 aa18.91■□□□□ 0.62
ABCF3-214ENST00000480562 DGKBQ9Y6T7 804 aa18.91■□□□□ 0.62
ABCF3-214ENST00000480562 A0A1W2PQM1 296 aa18.9■□□□□ 0.62
ABCF3-214ENST00000480562 RPLP0P05388 317 aaKnown RBP18.9■□□□□ 0.62
ABCF3-214ENST00000480562 TCF4P15884 667 aa18.9■□□□□ 0.62
ABCF3-214ENST00000480562 AMPD1P23109 780 aa18.9■□□□□ 0.62
ABCF3-214ENST00000480562 IL1R2P27930 398 aa18.9■□□□□ 0.62
ABCF3-214ENST00000480562 PRKCIP41743 596 aa18.9■□□□□ 0.62
ABCF3-214ENST00000480562 HCAR3P49019 387 aa18.9■□□□□ 0.62
ABCF3-214ENST00000480562 KIAA1024LP59773 190 aa18.9■□□□□ 0.62
ABCF3-214ENST00000480562 AP1S1P61966 158 aa18.9■□□□□ 0.62
ABCF3-214ENST00000480562 POLR2LP62875 67 aaKnown RBP18.9■□□□□ 0.62
ABCF3-214ENST00000480562 KLHL30Q0D2K2 578 aa18.9■□□□□ 0.62
ABCF3-214ENST00000480562 SMTNL2Q2TAL5 461 aa18.9■□□□□ 0.62
ABCF3-214ENST00000480562 FILIP1LQ4L180 1135 aa18.9■□□□□ 0.62
ABCF3-214ENST00000480562 TMCO4Q5TGY1 634 aa18.9■□□□□ 0.62
ABCF3-214ENST00000480562 PSTKQ8IV42 348 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms