RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 HNF1BP35680 557 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 FAM193AP78312 1265 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 PRKCQQ04759 706 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 IFFO1Q0D2I5 559 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 CAMK2GQ13555 558 aaPredicted RBP17.65■□□□□ 0.42
UPF3A-206ENST00000480362 LAMB3Q13751 1172 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 TAF1AQ15573 450 aaPredicted RBP17.65■□□□□ 0.42
UPF3A-206ENST00000480362 POM121L1PQ3SYA9 428 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 ESRP1Q6NXG1 681 aaKnown RBP17.65■□□□□ 0.42
UPF3A-206ENST00000480362 LRIG3Q6UXM1 1119 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 NLRP9Q7RTR0 991 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 TRMT11Q7Z4G4 463 aaKnown RBP17.65■□□□□ 0.42
UPF3A-206ENST00000480362 GLT6D1Q7Z4J2 308 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 DSG4Q86SJ6 1040 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 HCAR2Q8TDS4 363 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 SPOCK2Q92563 424 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 ASB2Q96Q27 587 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 GABRG3Q99928 467 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 MAGEE1Q9HCI5 957 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 ARHGEF3Q9NR81 526 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 HACD3Q9P035 362 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 DKK3Q9UBP4 350 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 WNT16Q9UBV4 365 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 SLC2A6Q9UGQ3 507 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 ARL5AQ9Y689 179 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 XIRP2A4UGR9 3374 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 TCF20Q9UGU0 1960 aaKnown RBP17.64■□□□□ 0.41
UPF3A-206ENST00000480362 ZCWPW2A0A1B0GU75 182 aa17.64■□□□□ 0.41
UPF3A-206ENST00000480362 AURKAO14965 403 aa17.64■□□□□ 0.41
UPF3A-206ENST00000480362 BUD23O43709 281 aaKnown RBP17.64■□□□□ 0.41
UPF3A-206ENST00000480362 SYNCRIPO60506 623 aaKnown RBP17.64■□□□□ 0.41
UPF3A-206ENST00000480362 RNF40O75150 1001 aa17.64■□□□□ 0.41
UPF3A-206ENST00000480362 IL1BP01584 269 aa17.64■□□□□ 0.41
UPF3A-206ENST00000480362 TIMP2P16035 220 aa17.64■□□□□ 0.41
UPF3A-206ENST00000480362 STX2P32856 288 aa17.64■□□□□ 0.41
UPF3A-206ENST00000480362 CCINQ13939 588 aa17.64■□□□□ 0.41
UPF3A-206ENST00000480362 STAT4Q14765 748 aa17.64■□□□□ 0.41
UPF3A-206ENST00000480362 TRMT10BQ6PF06 316 aaKnown RBP17.64■□□□□ 0.41
UPF3A-206ENST00000480362 TTC7BQ86TV6 843 aa17.64■□□□□ 0.41
UPF3A-206ENST00000480362 MMAAQ8IVH4 418 aaKnown RBP17.64■□□□□ 0.41
UPF3A-206ENST00000480362 UNC5BQ8IZJ1 945 aa17.64■□□□□ 0.41
UPF3A-206ENST00000480362 TXNDC5Q8NBS9 432 aaKnown RBP17.64■□□□□ 0.41
UPF3A-206ENST00000480362 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.64■□□□□ 0.41
UPF3A-206ENST00000480362 SCRN2Q96FV2 425 aa17.64■□□□□ 0.41
UPF3A-206ENST00000480362 SRPK1Q96SB4 655 aaKnown RBP17.64■□□□□ 0.41
UPF3A-206ENST00000480362 CCDC77Q9BR77 488 aa17.64■□□□□ 0.41
UPF3A-206ENST00000480362 TREX1Q9NSU2 369 aa17.64■□□□□ 0.41
UPF3A-206ENST00000480362 MOCS1Q9NZB8 636 aa17.64■□□□□ 0.41
UPF3A-206ENST00000480362 FBXL21Q9UKT6 434 aa17.64■□□□□ 0.41
UPF3A-206ENST00000480362 A0A0U1RQS6 177 aa17.63■□□□□ 0.41
UPF3A-206ENST00000480362 CAPN8A6NHC0 703 aa17.63■□□□□ 0.41
UPF3A-206ENST00000480362 C2orf81A6NN90 581 aa17.63■□□□□ 0.41
UPF3A-206ENST00000480362 C16orf96A6NNT2 1141 aa17.63■□□□□ 0.41
UPF3A-206ENST00000480362 ADAM23O75077 832 aa17.63■□□□□ 0.41
UPF3A-206ENST00000480362 ALDH1A2O94788 518 aa17.63■□□□□ 0.41
UPF3A-206ENST00000480362 PAPSS2O95340 614 aaPredicted RBP17.63■□□□□ 0.41
UPF3A-206ENST00000480362 LPOP22079 712 aaPredicted RBP17.63■□□□□ 0.41
UPF3A-206ENST00000480362 METAP1P53582 386 aa17.63■□□□□ 0.41
UPF3A-206ENST00000480362 EIF3BP55884 814 aaKnown RBP17.63■□□□□ 0.41
UPF3A-206ENST00000480362 PTPRCAPQ14761 206 aa17.63■□□□□ 0.41
UPF3A-206ENST00000480362 STARD3Q14849 445 aa17.63■□□□□ 0.41
UPF3A-206ENST00000480362 CNGA3Q16281 694 aa17.63■□□□□ 0.41
UPF3A-206ENST00000480362 UGP2Q16851 508 aa17.63■□□□□ 0.41
UPF3A-206ENST00000480362 USP45Q70EL2 814 aa17.63■□□□□ 0.41
UPF3A-206ENST00000480362 CYS1Q717R9 158 aa17.63■□□□□ 0.41
UPF3A-206ENST00000480362 TTC30BQ8N4P2 665 aa17.63■□□□□ 0.41
UPF3A-206ENST00000480362 RPLP0P6Q8NHW5 317 aa17.63■□□□□ 0.41
UPF3A-206ENST00000480362 ARRDC3Q96B67 414 aa17.63■□□□□ 0.41
UPF3A-206ENST00000480362 RUFY1Q96T51 708 aa17.63■□□□□ 0.41
UPF3A-206ENST00000480362 GPR63Q9BZJ6 419 aa17.63■□□□□ 0.41
UPF3A-206ENST00000480362 RSPH9Q9H1X1 276 aaPredicted RBP17.63■□□□□ 0.41
UPF3A-206ENST00000480362 TRABDQ9H4I3 376 aa17.63■□□□□ 0.41
UPF3A-206ENST00000480362 ACSS3Q9H6R3 686 aa17.63■□□□□ 0.41
UPF3A-206ENST00000480362 RIMKLBQ9ULI2 386 aa17.63■□□□□ 0.41
UPF3A-206ENST00000480362 ZNF711Q9Y462 761 aa17.63■□□□□ 0.41
UPF3A-206ENST00000480362 KRBA1A5PL33 1030 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 A8MX80 341 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 UPK3BL1B0FP48 263 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 UPK3BL2E5RIL1 263 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 C1QTNF3-AMACRE9PGA6 284 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 AGPSO00116 658 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 RNASEH1O60930 286 aaKnown RBP17.62■□□□□ 0.41
UPF3A-206ENST00000480362 PIAS1O75925 651 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 SLC4A1P02730 911 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 HOXB2P14652 356 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 XPAP23025 273 aaPredicted RBP17.62■□□□□ 0.41
UPF3A-206ENST00000480362 ITGB7P26010 798 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 PSMD8P48556 350 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 STARD6P59095 220 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 TMPRSS15P98073 1019 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 SEMG2Q02383 582 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 ZNF844Q08AG5 666 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 FRG1Q14331 258 aaKnown RBP17.62■□□□□ 0.41
UPF3A-206ENST00000480362 LONRF1Q17RB8 773 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 SKIDA1Q1XH10 827 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 KBTBD12Q3ZCT8 623 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 HSF5Q4G112 596 aaPredicted RBP17.62■□□□□ 0.41
UPF3A-206ENST00000480362 LRRC73Q5JTD7 316 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 CEP85LQ5SZL2 805 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 FAM46CQ5VWP2 391 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms