RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 ARL4CP56559 192 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 CNTN1Q12860 1018 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 HIF1AQ16665 826 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 DPPA4Q7L190 304 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 RAVER1Q8IY67 606 aaKnown RBP12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 PDIK1LQ8N165 341 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 PTCD2Q8WV60 388 aaKnown RBP12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 HMGB4Q8WW32 186 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 LRRC39Q96DD0 335 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 HHIPQ96QV1 700 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 RANBP9Q96S59 729 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 APOL2Q9BQE5 337 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 IL22Q9GZX6 179 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 TSPYL1Q9H0U9 437 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 SLC6A17Q9H1V8 727 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 NEUROG2Q9H2A3 272 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 KDM4CQ9H3R0 1056 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 MAGEE1Q9HCI5 957 aa12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 POLR3BQ9NW08 1133 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC12-218ENST00000479897 A0A1W2PP55 124 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 C10orf142B7Z368 130 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 H0Y858 1186 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 PLRG1O43660 514 aaKnown RBP12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 ZNF217O75362 1048 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 SLC34A2O95436 690 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 ACADMP11310 421 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 TDGF1P13385 188 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 VIPR1P32241 457 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 CARSP49589 748 aaKnown RBP12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 TERF1P54274 439 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 CDKN3Q16667 212 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 DNAJC21Q5F1R6 531 aaKnown RBP12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 ANO7Q6IWH7 933 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 ERAP2Q6P179 960 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 FBXL19Q6PCT2 694 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 KIAA1324Q6UXG2 1013 aaKnown RBP12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 CEP128Q6ZU80 1094 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 KDELC2Q7Z4H8 507 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 CACUL1Q86Y37 369 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 HDDC3Q8N4P3 179 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 SLC25A41Q8N5S1 370 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 PAF1Q8N7H5 531 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 TMEM105Q8N8V8 129 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 DNAAF3Q8N9W5 541 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 MYRIPQ8NFW9 859 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 BRSK1Q8TDC3 778 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 PEX13Q92968 403 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 PBXIP1Q96AQ6 731 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 FMO2Q99518 471 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 MRM3Q9HC36 420 aaKnown RBP12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 PCDH12Q9NPG4 1184 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 ITM2CQ9NQX7 267 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 FBXL12Q9NXK8 326 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 BFARQ9NZS9 450 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 BCCIPQ9P287 314 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 B4GALT6Q9UBX8 382 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 MTRF1LQ9UGC7 380 aaKnown RBP12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 SERGEFQ9UGK8 458 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 RAB21Q9UL25 225 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 RIMKLBQ9ULI2 386 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 FADS3Q9Y5Q0 445 aa12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 V9GYY5 206 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC12-218ENST00000479897 NUMA1Q14980 2115 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 NPIPB15A6NHN6 443 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 GOLGA8MH3BSY2 632 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 PSMD11O00231 422 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 TSPAN6O43657 245 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 RNASEH2AO75792 299 aaKnown RBP12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 ALPIP09923 528 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 XPAP23025 273 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 PSMA3P25788 255 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 HNF1BP35680 557 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 TPMTP51580 245 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 ADPRHP54922 357 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 TAS2R38P59533 333 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 PDE1BQ01064 536 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 RALGDSQ12967 914 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 LAMB3Q13751 1172 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 HLTFQ14527 1009 aaKnown RBP eCLIP12.58□□□□□ -0.42e-6■□□□□ 9.1
TRAPPC12-218ENST00000479897 TAF1AQ15573 450 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 POM121L1PQ3SYA9 428 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 TMEM52BQ4KMG9 183 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 CENPUQ71F23 418 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 TTC7BQ86TV6 843 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 RELL1Q8IUW5 271 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 TTC30BQ8N4P2 665 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 ERLEC1Q96DZ1 483 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 SIGLEC10Q96LC7 697 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 OMDQ99983 421 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 HINFPQ9BQA5 517 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 NAT9Q9BTE0 207 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 COL25A1Q9BXS0 654 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 EPC1Q9H2F5 836 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 EPHX3Q9H6B9 360 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 SGK2Q9HBY8 427 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 PREBQ9HCU5 417 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 SPATA6Q9NWH7 488 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 NFKBIL1Q9UBC1 381 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 NCKAP1Q9Y2A7 1128 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms