RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 EPHB6O15197 1021 aa12.86□□□□□ -0.35
TDP2-204ENST00000478507 SUV39H1O43463 412 aa12.86□□□□□ -0.35
TDP2-204ENST00000478507 GFPT2O94808 682 aa12.86□□□□□ -0.35
TDP2-204ENST00000478507 FAM87AP0C7U9 286 aa12.86□□□□□ -0.35
TDP2-204ENST00000478507 JMJD7P0C870 316 aa12.86□□□□□ -0.35
TDP2-204ENST00000478507 KRT3P12035 628 aa12.86□□□□□ -0.35
TDP2-204ENST00000478507 GM2AP17900 193 aa12.86□□□□□ -0.35
TDP2-204ENST00000478507 ERCC5P28715 1186 aaPredicted RBP12.86□□□□□ -0.35
TDP2-204ENST00000478507 TRIM23P36406 574 aa12.86□□□□□ -0.35
TDP2-204ENST00000478507 UBE2HP62256 183 aa12.86□□□□□ -0.35
TDP2-204ENST00000478507 BECN1Q14457 450 aa12.86□□□□□ -0.35
TDP2-204ENST00000478507 GRM3Q14832 879 aa12.86□□□□□ -0.35
TDP2-204ENST00000478507 TPD52L1Q16890 204 aaPredicted RBP12.86□□□□□ -0.35
TDP2-204ENST00000478507 BRAT1Q6PJG6 821 aa12.86□□□□□ -0.35
TDP2-204ENST00000478507 WDR59Q6PJI9 974 aa12.86□□□□□ -0.35
TDP2-204ENST00000478507 SLFN11Q7Z7L1 901 aa12.86□□□□□ -0.35
TDP2-204ENST00000478507 DNAAF5Q86Y56 855 aa12.86□□□□□ -0.35
TDP2-204ENST00000478507 CAMK1DQ8IU85 385 aa12.86□□□□□ -0.35
TDP2-204ENST00000478507 HTR3CQ8WXA8 447 aa12.86□□□□□ -0.35
TDP2-204ENST00000478507 ECHDC3Q96DC8 303 aa12.86□□□□□ -0.35
TDP2-204ENST00000478507 TRIM4Q9C037 500 aa12.86□□□□□ -0.35
TDP2-204ENST00000478507 B3GNT4Q9C0J1 378 aa12.86□□□□□ -0.35
TDP2-204ENST00000478507 LRRC19Q9H756 370 aa12.86□□□□□ -0.35
TDP2-204ENST00000478507 ATP8A1Q9Y2Q0 1164 aa12.86□□□□□ -0.35
TDP2-204ENST00000478507 RNF215Q9Y6U7 377 aa12.86□□□□□ -0.35
TDP2-204ENST00000478507 A0A1W2PQC6 194 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 NUDT21O43809 227 aaKnown RBP12.85□□□□□ -0.35
TDP2-204ENST00000478507 TNFP01375 233 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 PCCBP05166 539 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 HOXC4P09017 264 aaPredicted RBP12.85□□□□□ -0.35
TDP2-204ENST00000478507 SOX5P35711 763 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 RGRP47804 291 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 NFKB2Q00653 900 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 B4GALNT1Q00973 533 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 C14orf28Q4W4Y0 310 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 TCP11X2Q5H9J9 407 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 TRIM72Q6ZMU5 477 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 ZNF438Q7Z4V0 828 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 VASH2Q86V25 355 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 C17orf82Q86X59 251 aaPredicted RBP12.85□□□□□ -0.35
TDP2-204ENST00000478507 ZFAND4Q86XD8 727 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 ZNF354CQ86Y25 554 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 PHF13Q86YI8 300 aaPredicted RBP12.85□□□□□ -0.35
TDP2-204ENST00000478507 PELI3Q8N2H9 469 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 Q8N9G6 341 aaPredicted RBP12.85□□□□□ -0.35
TDP2-204ENST00000478507 C3orf20Q8ND61 904 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 OR56A4Q8NGH8 313 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 ATL2Q8NHH9 583 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 CCL4L1Q8NHW4 92 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 TUBGCP5Q96RT8 1024 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 FUCA2Q9BTY2 467 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 FAM117AQ9C073 453 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 TMEM168Q9H0V1 697 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 MRPL40Q9NQ50 206 aaKnown RBP12.85□□□□□ -0.35
TDP2-204ENST00000478507 SAMSN1Q9NSI8 373 aaKnown RBP12.85□□□□□ -0.35
TDP2-204ENST00000478507 UBA2Q9UBT2 640 aaPredicted RBP12.85□□□□□ -0.35
TDP2-204ENST00000478507 FZD10Q9ULW2 581 aa12.85□□□□□ -0.35
TDP2-204ENST00000478507 NBASA2RRP1 2371 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 SIGLEC16A6NMB1 481 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 J3KR12 359 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 TNFRSF10CO14798 259 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 CCP110O43303 1012 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 PRAMEF11O60813 436 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 RECQL5O94762 991 aaPredicted RBP12.84□□□□□ -0.35
TDP2-204ENST00000478507 PRKCGP05129 697 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 GPD1P21695 349 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 XPAP23025 273 aaPredicted RBP12.84□□□□□ -0.35
TDP2-204ENST00000478507 CSNK1DP48730 415 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 KLK7P49862 253 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 ARSDP51689 593 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 ZNF143P52747 638 aaPredicted RBP12.84□□□□□ -0.35
TDP2-204ENST00000478507 SRSF1Q07955 248 aaKnown RBP eCLIP12.84□□□□□ -0.35
TDP2-204ENST00000478507 NR1D2Q14995 579 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 C16orf72Q14CZ0 275 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 TBR1Q16650 682 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 EFHC2Q5JST6 749 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 PPP1R15BQ5SWA1 713 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 AFMIDQ63HM1 303 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 SPECC1LQ69YQ0 1117 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 ERAP2Q6P179 960 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 LIPIQ6XZB0 460 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 MON1BQ7L1V2 547 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 FAM46DQ8NEK8 389 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 USP7Q93009 1102 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 CMKLR1Q99788 373 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 NCAPGQ9BPX3 1015 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 LGR4Q9BXB1 951 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 SEMA6CQ9H3T2 930 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 SEPT10Q9P0V9 454 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 LRIT1Q9P2V4 623 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 HEMK1Q9Y5R4 338 aaPredicted RBP12.84□□□□□ -0.35
TDP2-204ENST00000478507 LRRK2Q5S007 2527 aa12.84□□□□□ -0.35
TDP2-204ENST00000478507 TRAFD1O14545 582 aaPredicted RBP12.83□□□□□ -0.36
TDP2-204ENST00000478507 FGF10O15520 208 aaPredicted RBP12.83□□□□□ -0.36
TDP2-204ENST00000478507 B4GAT1O43505 415 aa12.83□□□□□ -0.36
TDP2-204ENST00000478507 CREB3O43889 395 aa12.83□□□□□ -0.36
TDP2-204ENST00000478507 SFTPCP11686 197 aa12.83□□□□□ -0.36
TDP2-204ENST00000478507 EEF1GP26641 437 aaKnown RBP12.83□□□□□ -0.36
TDP2-204ENST00000478507 CD82P27701 267 aa12.83□□□□□ -0.36
TDP2-204ENST00000478507 NDST2P52849 883 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms