RNA–Protein interactions for RNA: ENST00000478171.1

PLXNB1-214, Transcript of plexin B1, humanhuman

TSL 3

Gene PLXNB1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-214ENST00000478171 CCL4L1Q8NHW4 92 aa16.3■□□□□ 0.2
PLXNB1-214ENST00000478171 CCDC97Q96F63 343 aaPredicted RBP16.3■□□□□ 0.2
PLXNB1-214ENST00000478171 KCTD15Q96SI1 283 aaPredicted RBP16.3■□□□□ 0.2
PLXNB1-214ENST00000478171 RBM15Q96T37 977 aaKnown RBP eCLIP16.3■□□□□ 0.2
PLXNB1-214ENST00000478171 AGPAT1Q99943 283 aa16.3■□□□□ 0.2
PLXNB1-214ENST00000478171 LRRN3Q9H3W5 708 aa16.3■□□□□ 0.2
PLXNB1-214ENST00000478171 SUDS3Q9H7L9 328 aaPredicted RBP16.3■□□□□ 0.2
PLXNB1-214ENST00000478171 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.3■□□□□ 0.2
PLXNB1-214ENST00000478171 LOXL2Q9Y4K0 774 aa16.3■□□□□ 0.2
PLXNB1-214ENST00000478171 AHCTF1Q8WYP5 2266 aa16.3■□□□□ 0.2
PLXNB1-214ENST00000478171 TTC24A2A3L6 582 aaPredicted RBP16.29■□□□□ 0.2
PLXNB1-214ENST00000478171 A8MX80 341 aa16.29■□□□□ 0.2
PLXNB1-214ENST00000478171 FGF10O15520 208 aaPredicted RBP16.29■□□□□ 0.2
PLXNB1-214ENST00000478171 NOBOXO60393 691 aa16.29■□□□□ 0.2
PLXNB1-214ENST00000478171 RECQL5O94762 991 aaPredicted RBP16.29■□□□□ 0.2
PLXNB1-214ENST00000478171 TPM2P07951 284 aa16.29■□□□□ 0.2
PLXNB1-214ENST00000478171 ETV5P41161 510 aa16.29■□□□□ 0.2
PLXNB1-214ENST00000478171 SUOXP51687 545 aa16.29■□□□□ 0.2
PLXNB1-214ENST00000478171 MTM1Q13496 603 aa16.29■□□□□ 0.2
PLXNB1-214ENST00000478171 BRAT1Q6PJG6 821 aa16.29■□□□□ 0.2
PLXNB1-214ENST00000478171 TMPRSS9Q7Z410 1059 aa16.29■□□□□ 0.2
PLXNB1-214ENST00000478171 GKN2Q86XP6 184 aa16.29■□□□□ 0.2
PLXNB1-214ENST00000478171 ARHGAP12Q8IWW6 846 aa16.29■□□□□ 0.2
PLXNB1-214ENST00000478171 TP53INP2Q8IXH6 220 aa16.29■□□□□ 0.2
PLXNB1-214ENST00000478171 MCOLN2Q8IZK6 566 aa16.29■□□□□ 0.2
PLXNB1-214ENST00000478171 GPR156Q8NFN8 814 aa16.29■□□□□ 0.2
PLXNB1-214ENST00000478171 SCG3Q8WXD2 468 aaKnown RBP16.29■□□□□ 0.2
PLXNB1-214ENST00000478171 CCNL2Q96S94 520 aaPredicted RBP16.29■□□□□ 0.2
PLXNB1-214ENST00000478171 CNPY3Q9BT09 278 aa16.29■□□□□ 0.2
PLXNB1-214ENST00000478171 TRIM7Q9C029 511 aa16.29■□□□□ 0.2
PLXNB1-214ENST00000478171 DHX35Q9H5Z1 703 aaKnown RBP16.29■□□□□ 0.2
PLXNB1-214ENST00000478171 AP4E1Q9UPM8 1137 aa16.29■□□□□ 0.2
PLXNB1-214ENST00000478171 RNF215Q9Y6U7 377 aa16.29■□□□□ 0.2
PLXNB1-214ENST00000478171 TMEM110-MUSTN1A8MSY1 372 aa16.28■□□□□ 0.2
PLXNB1-214ENST00000478171 TMCO5BA8MYB1 307 aa16.28■□□□□ 0.2
PLXNB1-214ENST00000478171 EEF2KO00418 725 aaKnown RBP16.28■□□□□ 0.2
PLXNB1-214ENST00000478171 TNFP01375 233 aa16.28■□□□□ 0.2
PLXNB1-214ENST00000478171 MLLT3P42568 568 aaPredicted RBP16.28■□□□□ 0.2
PLXNB1-214ENST00000478171 DCUN1D2Q6PH85 259 aa16.28■□□□□ 0.2
PLXNB1-214ENST00000478171 LVRNQ6Q4G3 990 aa16.28■□□□□ 0.2
PLXNB1-214ENST00000478171 TAF8Q7Z7C8 310 aa16.28■□□□□ 0.2
PLXNB1-214ENST00000478171 SRLQ86TD4 932 aa16.28■□□□□ 0.2
PLXNB1-214ENST00000478171 VASH2Q86V25 355 aa16.28■□□□□ 0.2
PLXNB1-214ENST00000478171 ARFGAP1Q8N6T3 406 aa16.28■□□□□ 0.2
PLXNB1-214ENST00000478171 FAM46DQ8NEK8 389 aa16.28■□□□□ 0.2
PLXNB1-214ENST00000478171 SNRNP25Q9BV90 132 aaKnown RBP16.28■□□□□ 0.2
PLXNB1-214ENST00000478171 CINPQ9BW66 212 aaPredicted RBP16.28■□□□□ 0.2
PLXNB1-214ENST00000478171 LGR4Q9BXB1 951 aa16.28■□□□□ 0.2
PLXNB1-214ENST00000478171 TMEM168Q9H0V1 697 aa16.28■□□□□ 0.2
PLXNB1-214ENST00000478171 FOXJ2Q9P0K8 574 aa16.28■□□□□ 0.2
PLXNB1-214ENST00000478171 MYO18BQ8IUG5 2567 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 ANKRD62A6NC57 917 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 CYSRT1A8MQ03 144 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 B8ZZF3 427 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 DFFAO00273 331 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 PALMO75781 387 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 PSMA2P25787 234 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 CCKBRP32239 447 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 MAZP56270 477 aaKnown RBP16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 KIAA1024LP59773 190 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 UBXN1Q04323 297 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 AGERQ15109 404 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 CT47A1Q5JQC4 288 aaPredicted RBP16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 CERCAMQ5T4B2 595 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 LIPIQ6XZB0 460 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 CYP4V2Q6ZWL3 525 aaPredicted RBP16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 APTXQ7Z2E3 356 aaKnown RBP16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 SPRED1Q7Z699 444 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 PAF1Q8N7H5 531 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 EXD3Q8N9H8 876 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 OR56A4Q8NGH8 313 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 HCAR2Q8TDS4 363 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 PTCD2Q8WV60 388 aaKnown RBP16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 ECHDC3Q96DC8 303 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 MED8Q96G25 268 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 ZNF641Q96N77 438 aaPredicted RBP16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 TUBGCP5Q96RT8 1024 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 STRADBQ9C0K7 418 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 ATP13A3Q9H7F0 1226 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 SP110Q9HB58 689 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 LMBRD1Q9NUN5 540 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 LIMA1Q9UHB6 759 aaKnown RBP16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 PCSK1NQ9UHG2 260 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 MOSPD1Q9UJG1 213 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 PCDHGA7Q9Y5G6 932 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 DGKBQ9Y6T7 804 aa16.27■□□□□ 0.2
PLXNB1-214ENST00000478171 SCN8AQ9UQD0 1980 aa16.27■□□□□ 0.19
PLXNB1-214ENST00000478171 PRAMEF33A0A0G2JMD5 474 aa16.26■□□□□ 0.19
PLXNB1-214ENST00000478171 CAPN8A6NHC0 703 aa16.26■□□□□ 0.19
PLXNB1-214ENST00000478171 ARHGAP42A6NI28 874 aa16.26■□□□□ 0.19
PLXNB1-214ENST00000478171 CACNB4O00305 520 aaPredicted RBP16.26■□□□□ 0.19
PLXNB1-214ENST00000478171 SLC28A2O43868 658 aa16.26■□□□□ 0.19
PLXNB1-214ENST00000478171 PRAMEF10O60809 474 aa16.26■□□□□ 0.19
PLXNB1-214ENST00000478171 ELFN1P0C7U0 828 aa16.26■□□□□ 0.19
PLXNB1-214ENST00000478171 JMJD7P0C870 316 aa16.26■□□□□ 0.19
PLXNB1-214ENST00000478171 ERCC2P18074 760 aa16.26■□□□□ 0.19
PLXNB1-214ENST00000478171 WT1P19544 449 aaPredicted RBP16.26■□□□□ 0.19
PLXNB1-214ENST00000478171 SERPINA4P29622 427 aa16.26■□□□□ 0.19
PLXNB1-214ENST00000478171 NDST2P52849 883 aa16.26■□□□□ 0.19
PLXNB1-214ENST00000478171 AIF1P55008 147 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms