RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 RALGPS1Q5JS13 557 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 ZNF569Q5MCW4 686 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 ARMC12Q5T9G4 340 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 DARS2Q6PI48 645 aaKnown RBP10.33□□□□□ -0.76
HDAC6-222ENST00000478095 KDELC2Q7Z4H8 507 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 CDKL3Q8IVW4 592 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-222ENST00000478095 ZNF567Q8N184 647 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 SLC35F6Q8N357 371 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 LPCAT1Q8NF37 534 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 SPATA22Q8NHS9 363 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 ATG4AQ8WYN0 398 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 SLC17A9Q9BYT1 436 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 GLOD4Q9HC38 313 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 UBP1Q9NZI7 540 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 B4GALT6Q9UBX8 382 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 TPX2Q9ULW0 747 aaKnown RBP10.33□□□□□ -0.76
HDAC6-222ENST00000478095 DMTF1Q9Y222 760 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 CHKBQ9Y259 395 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 SNX11Q9Y5W9 270 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 GVINP1Q7Z2Y8 2422 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 RIF1Q5UIP0 2472 aaKnown RBP10.32□□□□□ -0.76
HDAC6-222ENST00000478095 A0A1W2PR77 199 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 NPIPB15A6NHN6 443 aaPredicted RBP10.32□□□□□ -0.76
HDAC6-222ENST00000478095 PRAMEF26H0Y7S4 382 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 KCNN4O15554 427 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 MTSS1O43312 755 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 FZD6O60353 706 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 MT-CYBP00156 380 aaPredicted RBP10.32□□□□□ -0.76
HDAC6-222ENST00000478095 PRLP01236 227 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 C6P13671 934 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 HNRNPA2B1P22626 353 aaKnown RBP10.32□□□□□ -0.76
HDAC6-222ENST00000478095 AKT2P31751 481 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 CD68P34810 354 aaPredicted RBP10.32□□□□□ -0.76
HDAC6-222ENST00000478095 GRIA4P48058 902 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 LIG3P49916 1009 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 SUOXP51687 545 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 EPHB1P54762 984 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 C21orf59P57076 290 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 POLR2LP62875 67 aaKnown RBP10.32□□□□□ -0.76
HDAC6-222ENST00000478095 RALGDSQ12967 914 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 STAT4Q14765 748 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 TEAD4Q15561 434 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 KIF19Q2TAC6 998 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 UAP1L1Q3KQV9 507 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 TMEM52BQ4KMG9 183 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 PRAMEF14Q5SWL7 426 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 DENND2CQ68D51 928 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 GCNT7Q6ZNI0 430 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 DPPA4Q7L190 304 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 PID1Q7Z2X4 250 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 SLC13A5Q86YT5 568 aaPredicted RBP10.32□□□□□ -0.76
HDAC6-222ENST00000478095 MINDY1Q8N5J2 469 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 TTC13Q8NBP0 860 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 TMEM145Q8NBT3 493 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 PIH1D2Q8WWB5 315 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 IMP4Q96G21 291 aaKnown RBP10.32□□□□□ -0.76
HDAC6-222ENST00000478095 TEKT5Q96M29 485 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 C1QTNF2Q9BXJ5 285 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 SLC25A51Q9H1U9 297 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 CARD9Q9H257 536 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 IL21RQ9HBE5 538 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 PCDH9Q9HC56 1237 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 RSPH14Q9UHP6 348 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 ANKRD6Q9Y2G4 727 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.32□□□□□ -0.76
HDAC6-222ENST00000478095 PLXND1Q9Y4D7 1925 aa10.32□□□□□ -0.76
HDAC6-222ENST00000478095 NUP205Q92621 2012 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 A0A1W2PQ67 120 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 C4orf47A7E2U8 309 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 SMAPO00193 183 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 CDX4O14627 284 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-222ENST00000478095 VILLO15195 856 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 KIF5CO60282 957 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 LZTS3O60299 673 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-222ENST00000478095 CEP104O60308 925 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 FOXD2O60548 495 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-222ENST00000478095 PMPCBO75439 489 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 TM7SF2O76062 418 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 ATP1A1P05023 1023 aaKnown RBP10.31□□□□□ -0.76
HDAC6-222ENST00000478095 SYPP08247 313 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 ELFN1P0C7U0 828 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 CA4P22748 312 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 LHCGRP22888 699 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 CES1P23141 567 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 CD38P28907 300 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 VIPR1P32241 457 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 NUDT1P36639 197 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 GALNT3Q14435 633 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 CNGA3Q16281 694 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 RSPO4Q2I0M5 234 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-222ENST00000478095 STPG1Q5TH74 334 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 USP45Q70EL2 814 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 PTAR1Q7Z6K3 402 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-222ENST00000478095 TSPAN33Q86UF1 283 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 FAM71DQ8N9W8 422 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 CCDC110Q8TBZ0 833 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 C1orf54Q8WWF1 131 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 KLF6Q99612 283 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-222ENST00000478095 TMEM121Q9BTD3 319 aa10.31□□□□□ -0.76
HDAC6-222ENST00000478095 GAREM1Q9H706 876 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms