RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 MAXP61244 160 aa21.86■■□□□ 1.09
COL9A3-211ENST00000477612 LRRC38Q5VT99 294 aa21.86■■□□□ 1.09
COL9A3-211ENST00000477612 CACTIN-AS1Q8N1I8 211 aa21.86■■□□□ 1.09
COL9A3-211ENST00000477612 CBARPQ8N350 705 aaPredicted RBP21.86■■□□□ 1.09
COL9A3-211ENST00000477612 ZMIZ1Q9ULJ6 1067 aa21.86■■□□□ 1.09
COL9A3-211ENST00000477612 PHTF1Q9UMS5 762 aa21.86■■□□□ 1.09
COL9A3-211ENST00000477612 K7ESM1 405 aa21.85■■□□□ 1.09
COL9A3-211ENST00000477612 TPP1O14773 563 aa21.85■■□□□ 1.09
COL9A3-211ENST00000477612 LZTS3O60299 673 aaPredicted RBP21.85■■□□□ 1.09
COL9A3-211ENST00000477612 CKMT1AP12532 417 aa21.85■■□□□ 1.09
COL9A3-211ENST00000477612 CES1P23141 567 aa21.85■■□□□ 1.09
COL9A3-211ENST00000477612 SLC1A1P43005 524 aa21.85■■□□□ 1.09
COL9A3-211ENST00000477612 SEMG2Q02383 582 aa21.85■■□□□ 1.09
COL9A3-211ENST00000477612 SLC10A2Q12908 348 aaPredicted RBP21.85■■□□□ 1.09
COL9A3-211ENST00000477612 TRAF2Q12933 501 aa21.85■■□□□ 1.09
COL9A3-211ENST00000477612 MTM1Q13496 603 aa21.85■■□□□ 1.09
COL9A3-211ENST00000477612 HS1BP3Q53T59 392 aa21.85■■□□□ 1.09
COL9A3-211ENST00000477612 HDAC11Q96DB2 347 aa21.85■■□□□ 1.09
COL9A3-211ENST00000477612 APOOQ9BUR5 198 aa21.85■■□□□ 1.09
COL9A3-211ENST00000477612 USP29Q9HBJ7 922 aa21.85■■□□□ 1.09
COL9A3-211ENST00000477612 FREM2Q5SZK8 3169 aa21.85■■□□□ 1.09
COL9A3-211ENST00000477612 ASXL3Q9C0F0 2248 aa21.84■■□□□ 1.09
COL9A3-211ENST00000477612 C3orf70A6NLC5 250 aaPredicted RBP21.84■■□□□ 1.09
COL9A3-211ENST00000477612 AQP9O43315 295 aa21.84■■□□□ 1.09
COL9A3-211ENST00000477612 FZD6O60353 706 aa21.84■■□□□ 1.09
COL9A3-211ENST00000477612 RECQL5O94762 991 aaPredicted RBP21.84■■□□□ 1.09
COL9A3-211ENST00000477612 MX2P20592 715 aa21.84■■□□□ 1.09
COL9A3-211ENST00000477612 GBE1Q04446 702 aa21.84■■□□□ 1.09
COL9A3-211ENST00000477612 INPP5AQ14642 412 aa21.84■■□□□ 1.09
COL9A3-211ENST00000477612 SLC9A4Q6AI14 798 aa21.84■■□□□ 1.09
COL9A3-211ENST00000477612 SCRN2Q96FV2 425 aa21.84■■□□□ 1.09
COL9A3-211ENST00000477612 MRFAP1L1Q96HT8 127 aa21.84■■□□□ 1.09
COL9A3-211ENST00000477612 APOLD1Q96LR9 279 aa21.84■■□□□ 1.09
COL9A3-211ENST00000477612 POLR1EQ9GZS1 481 aaKnown RBP21.84■■□□□ 1.09
COL9A3-211ENST00000477612 RBSNQ9H1K0 784 aa21.84■■□□□ 1.09
COL9A3-211ENST00000477612 NT5MQ9NPB1 228 aa21.84■■□□□ 1.09
COL9A3-211ENST00000477612 DTLQ9NZJ0 730 aa21.84■■□□□ 1.09
COL9A3-211ENST00000477612 SPASTQ9UBP0 616 aa21.84■■□□□ 1.09
COL9A3-211ENST00000477612 DKK4Q9UBT3 224 aa21.84■■□□□ 1.09
COL9A3-211ENST00000477612 B4GALT6Q9UBX8 382 aa21.84■■□□□ 1.09
COL9A3-211ENST00000477612 SALL4Q9UJQ4 1053 aa21.84■■□□□ 1.09
COL9A3-211ENST00000477612 LY6G6EA0A0G2JKS1 128 aa21.83■■□□□ 1.09
COL9A3-211ENST00000477612 FFAR2O15552 330 aa21.83■■□□□ 1.09
COL9A3-211ENST00000477612 PGLSO95336 258 aa21.83■■□□□ 1.09
COL9A3-211ENST00000477612 CPP00450 1065 aa21.83■■□□□ 1.09
COL9A3-211ENST00000477612 HOXC4P09017 264 aaPredicted RBP21.83■■□□□ 1.09
COL9A3-211ENST00000477612 ELFN1P0C7U0 828 aa21.83■■□□□ 1.09
COL9A3-211ENST00000477612 NFKBIAP25963 317 aa21.83■■□□□ 1.09
COL9A3-211ENST00000477612 TRIM23P36406 574 aa21.83■■□□□ 1.09
COL9A3-211ENST00000477612 NFATC4Q14934 902 aa21.83■■□□□ 1.09
COL9A3-211ENST00000477612 CCDC157Q569K6 752 aa21.83■■□□□ 1.09
COL9A3-211ENST00000477612 ZCCHC8Q6NZY4 707 aaKnown RBP21.83■■□□□ 1.09
COL9A3-211ENST00000477612 CCDC170Q8IYT3 715 aa21.83■■□□□ 1.09
COL9A3-211ENST00000477612 PHACTR4Q8IZ21 702 aa21.83■■□□□ 1.09
COL9A3-211ENST00000477612 PLD5Q8N7P1 536 aa21.83■■□□□ 1.09
COL9A3-211ENST00000477612 PIH1D2Q8WWB5 315 aa21.83■■□□□ 1.09
COL9A3-211ENST00000477612 COQ10AQ96MF6 247 aa21.83■■□□□ 1.09
COL9A3-211ENST00000477612 MCCC1Q96RQ3 725 aaPredicted RBP21.83■■□□□ 1.09
COL9A3-211ENST00000477612 SEMA3CQ99985 751 aa21.83■■□□□ 1.09
COL9A3-211ENST00000477612 KCTD5Q9NXV2 234 aa21.83■■□□□ 1.09
COL9A3-211ENST00000477612 APOBEC3BQ9UH17 382 aaKnown RBP21.83■■□□□ 1.09
COL9A3-211ENST00000477612 U3KQA8 63 aa21.83■■□□□ 1.09
COL9A3-211ENST00000477612 ZZEF1O43149 2961 aa21.82■■□□□ 1.08
COL9A3-211ENST00000477612 NEBLO76041 1014 aa21.82■■□□□ 1.08
COL9A3-211ENST00000477612 MAP3K6O95382 1288 aa21.82■■□□□ 1.08
COL9A3-211ENST00000477612 CCNB1P14635 433 aa21.82■■□□□ 1.08
COL9A3-211ENST00000477612 HTR1BP28222 390 aa21.82■■□□□ 1.08
COL9A3-211ENST00000477612 VIPR1P32241 457 aa21.82■■□□□ 1.08
COL9A3-211ENST00000477612 MAGEA1P43355 309 aa21.82■■□□□ 1.08
COL9A3-211ENST00000477612 BLKP51451 505 aa21.82■■□□□ 1.08
COL9A3-211ENST00000477612 DAB2P98082 770 aa21.82■■□□□ 1.08
COL9A3-211ENST00000477612 E2F1Q01094 437 aa21.82■■□□□ 1.08
COL9A3-211ENST00000477612 PPARDQ03181 441 aa21.82■■□□□ 1.08
COL9A3-211ENST00000477612 IHHQ14623 411 aa21.82■■□□□ 1.08
COL9A3-211ENST00000477612 ARMC12Q5T9G4 340 aa21.82■■□□□ 1.08
COL9A3-211ENST00000477612 ESRP1Q6NXG1 681 aaKnown RBP21.82■■□□□ 1.08
COL9A3-211ENST00000477612 RHOT1Q8IXI2 618 aa21.82■■□□□ 1.08
COL9A3-211ENST00000477612 RBFAQ8N0V3 343 aa21.82■■□□□ 1.08
COL9A3-211ENST00000477612 PAF1Q8N7H5 531 aa21.82■■□□□ 1.08
COL9A3-211ENST00000477612 ZCCHC14Q8WYQ9 949 aaKnown RBP21.82■■□□□ 1.08
COL9A3-211ENST00000477612 TCEAL2Q9H3H9 227 aaPredicted RBP21.82■■□□□ 1.08
COL9A3-211ENST00000477612 RP1P56715 2156 aa21.81■■□□□ 1.08
COL9A3-211ENST00000477612 LRRD1A4D1F6 860 aa21.81■■□□□ 1.08
COL9A3-211ENST00000477612 PSMD11O00231 422 aa21.81■■□□□ 1.08
COL9A3-211ENST00000477612 GCATO75600 419 aa21.81■■□□□ 1.08
COL9A3-211ENST00000477612 HEXIM1O94992 359 aaKnown RBP21.81■■□□□ 1.08
COL9A3-211ENST00000477612 GP1BAP07359 652 aa21.81■■□□□ 1.08
COL9A3-211ENST00000477612 CYP2A6P11509 494 aaPredicted RBP21.81■■□□□ 1.08
COL9A3-211ENST00000477612 FECHP22830 423 aa21.81■■□□□ 1.08
COL9A3-211ENST00000477612 DUSP3P51452 185 aaPredicted RBP21.81■■□□□ 1.08
COL9A3-211ENST00000477612 ZNF75DP51815 510 aa21.81■■□□□ 1.08
COL9A3-211ENST00000477612 HK3P52790 923 aa21.81■■□□□ 1.08
COL9A3-211ENST00000477612 PPIDQ08752 370 aaKnown RBP21.81■■□□□ 1.08
COL9A3-211ENST00000477612 CNGA3Q16281 694 aa21.81■■□□□ 1.08
COL9A3-211ENST00000477612 ZFYVE27Q5T4F4 411 aa21.81■■□□□ 1.08
COL9A3-211ENST00000477612 CCDC13Q8IYE1 715 aa21.81■■□□□ 1.08
COL9A3-211ENST00000477612 SDR16C5Q8N3Y7 309 aa21.81■■□□□ 1.08
COL9A3-211ENST00000477612 PDCD7Q8N8D1 485 aaKnown RBP21.81■■□□□ 1.08
COL9A3-211ENST00000477612 PLA2G15Q8NCC3 412 aa21.81■■□□□ 1.08
COL9A3-211ENST00000477612 ARRDC2Q8TBH0 407 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms