RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 TNFSF15O95150 251 aa11.43□□□□□ -0.58
HDLBP-236ENST00000477477 ATP1A3P13637 1013 aa11.43□□□□□ -0.58
HDLBP-236ENST00000477477 ERCC2P18074 760 aa11.43□□□□□ -0.58
HDLBP-236ENST00000477477 KIAA1024LP59773 190 aa11.43□□□□□ -0.58
HDLBP-236ENST00000477477 CFHR1Q03591 330 aa11.43□□□□□ -0.58
HDLBP-236ENST00000477477 VAC14Q08AM6 782 aa11.43□□□□□ -0.58
HDLBP-236ENST00000477477 RFTN1Q14699 578 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-236ENST00000477477 TAF1BQ53T94 588 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-236ENST00000477477 ERMARDQ5T6L9 678 aa11.43□□□□□ -0.58
HDLBP-236ENST00000477477 KCTD16Q68DU8 428 aa11.43□□□□□ -0.58
HDLBP-236ENST00000477477 FOXR1Q6PIV2 292 aa11.43□□□□□ -0.58
HDLBP-236ENST00000477477 CYP4V2Q6ZWL3 525 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-236ENST00000477477 ARL14Q8N4G2 192 aa11.43□□□□□ -0.58
HDLBP-236ENST00000477477 AOPEPQ8N6M6 819 aa11.43□□□□□ -0.58
HDLBP-236ENST00000477477 PLA2G15Q8NCC3 412 aa11.43□□□□□ -0.58
HDLBP-236ENST00000477477 FNIP1Q8TF40 1166 aa11.43□□□□□ -0.58
HDLBP-236ENST00000477477 SNRNP27Q8WVK2 155 aaKnown RBP11.43□□□□□ -0.58
HDLBP-236ENST00000477477 CCDC97Q96F63 343 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-236ENST00000477477 WBP1Q96G27 269 aa11.43□□□□□ -0.58
HDLBP-236ENST00000477477 LIN37Q96GY3 246 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-236ENST00000477477 GBP4Q96PP9 640 aa11.43□□□□□ -0.58
HDLBP-236ENST00000477477 RBM15Q96T37 977 aaKnown RBP eCLIP11.43□□□□□ -0.58
HDLBP-236ENST00000477477 CINPQ9BW66 212 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-236ENST00000477477 PCSK1NQ9UHG2 260 aa11.43□□□□□ -0.58
HDLBP-236ENST00000477477 DGKBQ9Y6T7 804 aa11.43□□□□□ -0.58
HDLBP-236ENST00000477477 ZNF462Q96JM2 2506 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 TMEM191CA6NGB0 347 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 LRRC53A6NM62 1247 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 D6RAR5 112 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 DFFAO00273 331 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 CACNB4O00305 520 aaPredicted RBP11.42□□□□□ -0.58
HDLBP-236ENST00000477477 TRAFD1O14545 582 aaPredicted RBP11.42□□□□□ -0.58
HDLBP-236ENST00000477477 TEX33O43247 280 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 RNF8O76064 485 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 TNFP01375 233 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 RPLP0P05388 317 aaKnown RBP11.42□□□□□ -0.58
HDLBP-236ENST00000477477 ITGA2BP08514 1039 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 ELFN1P0C7U0 828 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 MIPP30301 263 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 ZNF135P52742 658 aaPredicted RBP11.42□□□□□ -0.58
HDLBP-236ENST00000477477 AP1S1P61966 158 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 CCL7P80098 99 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 BCL2L1Q07817 233 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 IL10RBQ08334 325 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 NSUN2Q08J23 767 aaKnown RBP eCLIP11.42□□□□□ -0.58
HDLBP-236ENST00000477477 LIPIQ6XZB0 460 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 ARHGAP36Q6ZRI8 547 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 DPPA4Q7L190 304 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 B3GNT8Q7Z7M8 397 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 PSTKQ8IV42 348 aaKnown RBP11.42□□□□□ -0.58
HDLBP-236ENST00000477477 PAF1Q8N7H5 531 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 GPR156Q8NFN8 814 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 OR6C4Q8NGE1 309 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 OR56A4Q8NGH8 313 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 OR1E3Q8WZA6 343 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 FUBP1Q96AE4 644 aaKnown RBP11.42□□□□□ -0.58
HDLBP-236ENST00000477477 GFM1Q96RP9 751 aaKnown RBP11.42□□□□□ -0.58
HDLBP-236ENST00000477477 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.42□□□□□ -0.58
HDLBP-236ENST00000477477 TRIM7Q9C029 511 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 FGF22Q9HCT0 170 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 RP1P56715 2156 aa11.42□□□□□ -0.58
HDLBP-236ENST00000477477 SHROOM3Q8TF72 1996 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 A0A1W2PQM1 296 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 TMEM202A6NGA9 273 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 K7ENP7 123 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 PLD2O14939 933 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 PRPSAP2O60256 369 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 LRCH4O75427 683 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 HOXC4P09017 264 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-236ENST00000477477 PLA2G2AP14555 144 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 GM2AP17900 193 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 KELP23276 732 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 ANP32AP39687 249 aaKnown RBP11.41□□□□□ -0.58
HDLBP-236ENST00000477477 SCNN1BP51168 640 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 INHBCP55103 352 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 POLR2LP62875 67 aaKnown RBP11.41□□□□□ -0.58
HDLBP-236ENST00000477477 TYRO3Q06418 890 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 CLN3Q13286 438 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 EIF3IQ13347 325 aaKnown RBP11.41□□□□□ -0.58
HDLBP-236ENST00000477477 DPYSQ14117 519 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 LBRQ14739 615 aaKnown RBP11.41□□□□□ -0.58
HDLBP-236ENST00000477477 ASIC2Q16515 512 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 PPP6R3Q5H9R7 873 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-236ENST00000477477 CCDC183Q5T5S1 534 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 TMCO4Q5TGY1 634 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 E4F1Q66K89 784 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-236ENST00000477477 INO80CQ6PI98 192 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-236ENST00000477477 OGFOD3Q6PK18 319 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 RAB11FIP2Q7L804 512 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 ZNF571Q7Z3V5 609 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-236ENST00000477477 TTC9Q92623 222 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 NSMCE3Q96MG7 304 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 TMEM74Q96NL1 305 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 PSKH2Q96QS6 385 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 LRRN3Q9H3W5 708 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 HAUS4Q9H6D7 363 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 EPB41L5Q9HCM4 733 aa11.41□□□□□ -0.58
HDLBP-236ENST00000477477 RTN4Q9NQC3 1192 aaKnown RBP11.41□□□□□ -0.58
HDLBP-236ENST00000477477 CWC15Q9P013 229 aaKnown RBP11.41□□□□□ -0.58
HDLBP-236ENST00000477477 CNOT8Q9UFF9 292 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms