RNA–Protein interactions for RNA: ENST00000477119.1

APTX-221, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-221ENST00000477119 KLQ9UEF7 1012 aa13.48□□□□□ -0.25
APTX-221ENST00000477119 BZW2Q9Y6E2 419 aaKnown RBP13.48□□□□□ -0.25
APTX-221ENST00000477119 ARID1BQ8NFD5 2236 aaPredicted RBP13.48□□□□□ -0.25
APTX-221ENST00000477119 CELSR3Q9NYQ7 3312 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 TRPM6Q9BX84 2022 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 ACACAQ13085 2346 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 CHD5Q8TDI0 1954 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 URB1O60287 2271 aaKnown RBP13.47□□□□□ -0.25
APTX-221ENST00000477119 SYCE3A1L190 88 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 CASC3O15234 703 aaKnown RBP13.47□□□□□ -0.25
APTX-221ENST00000477119 TNFP01375 233 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 ALPIP09923 528 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 RARAP10276 462 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 RENBPP51606 427 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 FANCCQ00597 558 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 PIGHQ14442 188 aaPredicted RBP13.47□□□□□ -0.25
APTX-221ENST00000477119 ZNF235Q14590 738 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 NFKBIBQ15653 356 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 DPYSL2Q16555 572 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 HGSNATQ68CP4 663 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 TXNRD3NBQ6F5E7 133 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 LVRNQ6Q4G3 990 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 LIPIQ6XZB0 460 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 RBM44Q6ZP01 1051 aaKnown RBP13.47□□□□□ -0.25
APTX-221ENST00000477119 POLNQ7Z5Q5 900 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 LUZP1Q86V48 1076 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 ZNF248Q8NDW4 579 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 PCDH19Q8TAB3 1148 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 ATXN7L3BQ96GX2 97 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 BTBD6Q96KE9 485 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 WDR92Q96MX6 357 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 ZNF599Q96NL3 588 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 CSPG4P5Q96PW8 444 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 LGMNQ99538 433 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 CCDC3Q9BQI4 270 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 THAP2Q9H0W7 228 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 PRORYQ9H606 182 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 SYNDIG1Q9H7V2 258 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 ETNK2Q9NVF9 386 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 PCDHGC4Q9Y5F7 938 aa13.47□□□□□ -0.25
APTX-221ENST00000477119 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.46□□□□□ -0.25
APTX-221ENST00000477119 A0A1W2PQJ5 194 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 TMEM202A6NGA9 273 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 EIF4E1BA6NMX2 242 aaKnown RBP13.46□□□□□ -0.25
APTX-221ENST00000477119 CACNB4O00305 520 aaPredicted RBP13.46□□□□□ -0.25
APTX-221ENST00000477119 TRAFD1O14545 582 aaPredicted RBP13.46□□□□□ -0.25
APTX-221ENST00000477119 DXOO77932 396 aaKnown RBP13.46□□□□□ -0.25
APTX-221ENST00000477119 PEX11BO96011 259 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 SERPING1P05155 500 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 ELFN1P0C7U0 828 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 RBMS1P29558 406 aaKnown RBP13.46□□□□□ -0.25
APTX-221ENST00000477119 UBASH3AP57075 661 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 PCBP4P57723 403 aaKnown RBP13.46□□□□□ -0.25
APTX-221ENST00000477119 TLE3Q04726 772 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 ACOX1Q15067 660 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 C3orf38Q5JPI3 329 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 KCTD16Q68DU8 428 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 DPPA4Q7L190 304 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 GKN2Q86XP6 184 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 SPACA3Q8IXA5 215 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 SDR16C5Q8N3Y7 309 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 PGBD5Q8N414 524 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 ARL10Q8N8L6 244 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 PDCD6IPQ8WUM4 868 aaKnown RBP13.46□□□□□ -0.25
APTX-221ENST00000477119 OR1E3Q8WZA6 343 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 SYN2Q92777 582 aaPredicted RBP13.46□□□□□ -0.25
APTX-221ENST00000477119 FUBP1Q96AE4 644 aaKnown RBP13.46□□□□□ -0.25
APTX-221ENST00000477119 GRAMD1AQ96CP6 724 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 PDXPQ96GD0 296 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 HIC2Q96JB3 615 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 FCRL3Q96P31 734 aaPredicted RBP13.46□□□□□ -0.25
APTX-221ENST00000477119 IP6K2Q9UHH9 426 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 GPR34Q9UPC5 381 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 SATB2Q9UPW6 733 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 ENTPD2Q9Y5L3 495 aa13.46□□□□□ -0.25
APTX-221ENST00000477119 IGSF10Q6WRI0 2623 aa13.45□□□□□ -0.26
APTX-221ENST00000477119 A0A087X0T9 212 aa13.45□□□□□ -0.26
APTX-221ENST00000477119 A0A1W2PNU3 283 aaPredicted RBP13.45□□□□□ -0.26
APTX-221ENST00000477119 MAFKO60675 156 aa13.45□□□□□ -0.26
APTX-221ENST00000477119 TCEA3O75764 348 aa13.45□□□□□ -0.26
APTX-221ENST00000477119 FAM228BP0C875 321 aa13.45□□□□□ -0.26
APTX-221ENST00000477119 KELP23276 732 aa13.45□□□□□ -0.26
APTX-221ENST00000477119 PBX1P40424 430 aa13.45□□□□□ -0.26
APTX-221ENST00000477119 SSR1P43307 286 aaKnown RBP13.45□□□□□ -0.26
APTX-221ENST00000477119 ERVPABLB-1P60509 514 aa13.45□□□□□ -0.26
APTX-221ENST00000477119 ZBED6P86452 979 aa13.45□□□□□ -0.26
APTX-221ENST00000477119 SPIDRQ14159 915 aa13.45□□□□□ -0.26
APTX-221ENST00000477119 MARC1Q5VT66 337 aa13.45□□□□□ -0.26
APTX-221ENST00000477119 FOXR1Q6PIV2 292 aa13.45□□□□□ -0.26
APTX-221ENST00000477119 BBS5Q8N3I7 341 aa13.45□□□□□ -0.26
APTX-221ENST00000477119 KYQ8NBH2 561 aa13.45□□□□□ -0.26
APTX-221ENST00000477119 OR56A4Q8NGH8 313 aa13.45□□□□□ -0.26
APTX-221ENST00000477119 WDR48Q8TAF3 677 aa13.45□□□□□ -0.26
APTX-221ENST00000477119 NSMCE1Q8WV22 266 aa13.45□□□□□ -0.26
APTX-221ENST00000477119 TEKT4Q8WW24 435 aa13.45□□□□□ -0.26
APTX-221ENST00000477119 NUDCD1Q96RS6 583 aa13.45□□□□□ -0.26
APTX-221ENST00000477119 UBL7Q96S82 380 aaPredicted RBP13.45□□□□□ -0.26
APTX-221ENST00000477119 RBM15Q96T37 977 aaKnown RBP eCLIP13.45□□□□□ -0.26
APTX-221ENST00000477119 NOD2Q9HC29 1040 aa13.45□□□□□ -0.26
APTX-221ENST00000477119 PCDH18Q9HCL0 1135 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms