RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 LY6DQ14210 128 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 ANO6Q4KMQ2 910 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 TAF1BQ53T94 588 aaPredicted RBP11.73□□□□□ -0.53
VARS2-208ENST00000477052 ERMARDQ5T6L9 678 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 BROXQ5VW32 411 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 KIAA1614Q5VZ46 1190 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 AFMIDQ63HM1 303 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 DENND2CQ68D51 928 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 PLEKHA7Q6IQ23 1121 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 ARL10Q8N8L6 244 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 ZNF641Q96N77 438 aaPredicted RBP11.73□□□□□ -0.53
VARS2-208ENST00000477052 CINPQ9BW66 212 aaPredicted RBP11.73□□□□□ -0.53
VARS2-208ENST00000477052 EPB41L5Q9HCM4 733 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 FGF22Q9HCT0 170 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 PARVAQ9NVD7 372 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 ETNK2Q9NVF9 386 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 CWC15Q9P013 229 aaKnown RBP11.73□□□□□ -0.53
VARS2-208ENST00000477052 MOSPD1Q9UJG1 213 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 ATXN7L1Q9ULK2 861 aaPredicted RBP11.73□□□□□ -0.53
VARS2-208ENST00000477052 CFAP46Q8IYW2 2715 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 TEX51A0A1B0GUA7 166 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 A0A1W2PQM1 296 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 B4DGG1 531 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 PYCARD-AS1I3L0S3 204 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 DDX3XO00571 662 aaKnown RBP eCLIP11.72□□□□□ -0.53
VARS2-208ENST00000477052 NTN3O00634 580 aaPredicted RBP11.72□□□□□ -0.53
VARS2-208ENST00000477052 AMPD1P23109 780 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 IL1R2P27930 398 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 HTR1BP28222 390 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 SERPINA4P29622 427 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 PEX5P50542 639 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 AIF1P55008 147 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 BCL2L1Q07817 233 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 SLC10A7Q0GE19 358 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 SRSF6Q13247 344 aaKnown RBP11.72□□□□□ -0.53
VARS2-208ENST00000477052 ELOCQ15369 112 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 ASIC2Q16515 512 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 SMTNL2Q2TAL5 461 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 ZSCAN23Q3MJ62 389 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 BRAT1Q6PJG6 821 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 LIPIQ6XZB0 460 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 FSTL5Q8N475 847 aaPredicted RBP11.72□□□□□ -0.53
VARS2-208ENST00000477052 TPCN2Q8NHX9 752 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 NAT6Q93015 286 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 ZNF653Q96CK0 615 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 WDR92Q96MX6 357 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 NAP1L5Q96NT1 182 aaPredicted RBP11.72□□□□□ -0.53
VARS2-208ENST00000477052 SMIM14Q96QK8 99 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 GFM1Q96RP9 751 aaKnown RBP11.72□□□□□ -0.53
VARS2-208ENST00000477052 TMEM168Q9H0V1 697 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 ATP13A3Q9H7F0 1226 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 ZWILCHQ9H900 591 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 RTN4Q9NQC3 1192 aaKnown RBP11.72□□□□□ -0.53
VARS2-208ENST00000477052 TMEM63CQ9P1W3 806 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 CNOT8Q9UFF9 292 aaKnown RBP11.72□□□□□ -0.53
VARS2-208ENST00000477052 PCDHGC4Q9Y5F7 938 aa11.72□□□□□ -0.53
VARS2-208ENST00000477052 HELZ2Q9BYK8 2649 aaKnown RBP11.72□□□□□ -0.53
VARS2-208ENST00000477052 CCDC187A0A096LP49 1063 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 TMEM110-MUSTN1A8MSY1 372 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 CDRT15L2A8MXV6 281 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 TRAFD1O14545 582 aaPredicted RBP11.71□□□□□ -0.53
VARS2-208ENST00000477052 PRPSAP2O60256 369 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 LRCH4O75427 683 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 TCEA3O75764 348 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 TNFP01375 233 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 ALPIP09923 528 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 ELFN1P0C7U0 828 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 BLKP51451 505 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 SUOXP51687 545 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 CFHR1Q03591 330 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 CLN3Q13286 438 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 MTM1Q13496 603 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 DPYSQ14117 519 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 ACOX1Q15067 660 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 TGIF1Q15583 401 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 CCDC183Q5T5S1 534 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 TXNRD3NBQ6F5E7 133 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 TMPRSS9Q7Z410 1059 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 TAF8Q7Z7C8 310 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 GKN2Q86XP6 184 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 JAMLQ86YT9 394 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 PGBD5Q8N414 524 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 FAM46DQ8NEK8 389 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 OR56A4Q8NGH8 313 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 WDR36Q8NI36 951 aaKnown RBP11.71□□□□□ -0.53
VARS2-208ENST00000477052 HCAR2Q8TDS4 363 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 PDCD6IPQ8WUM4 868 aaKnown RBP11.71□□□□□ -0.53
VARS2-208ENST00000477052 PTCD2Q8WV60 388 aaKnown RBP11.71□□□□□ -0.53
VARS2-208ENST00000477052 SCG3Q8WXD2 468 aaKnown RBP11.71□□□□□ -0.53
VARS2-208ENST00000477052 HSPH1Q92598 858 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 ECHDC3Q96DC8 303 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 BTBD6Q96KE9 485 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 TBATAQ96M53 351 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 TUBGCP5Q96RT8 1024 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 CYP4F12Q9HCS2 524 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 B4GALT6Q9UBX8 382 aa11.71□□□□□ -0.53
VARS2-208ENST00000477052 ZNF462Q96JM2 2506 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 D6RAR5 112 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 TK2O00142 265 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 TOR1BO14657 336 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms