RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 TRPM6Q9BX84 2022 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 ASCC3Q8N3C0 2202 aaKnown RBP12.5□□□□□ -0.41
APTX-220ENST00000476858 SPEGQ15772 3267 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 USP27XA6NNY8 438 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 PRAMEF26H0Y7S4 382 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 K7ESM1 405 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 SH3BP5O60239 455 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 SDC3O75056 442 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 MT-CYBP00156 380 aaPredicted RBP12.5□□□□□ -0.41
APTX-220ENST00000476858 CCDC175P0C221 793 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 THEGLP0DJG4 465 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 ZFXP17010 805 aaPredicted RBP12.5□□□□□ -0.41
APTX-220ENST00000476858 HNRNPA2B1P22626 353 aaKnown RBP12.5□□□□□ -0.41
APTX-220ENST00000476858 RBL1P28749 1068 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 PTPN7P35236 360 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 HSPA9P38646 679 aaKnown RBP12.5□□□□□ -0.41
APTX-220ENST00000476858 DPP6P42658 865 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 OLIG2Q13516 323 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 IRF4Q15306 451 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 CNGA3Q16281 694 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 ZNF423Q2M1K9 1284 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 WSCD2Q2TBF2 565 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 TIGD7Q6NT04 549 aaPredicted RBP12.5□□□□□ -0.41
APTX-220ENST00000476858 BRAT1Q6PJG6 821 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 MICALCLQ6ZW33 695 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 DPPA4Q7L190 304 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 HSD11B1LQ7Z5J1 315 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 ADAT2Q7Z6V5 191 aaKnown RBP12.5□□□□□ -0.41
APTX-220ENST00000476858 ABI3BPQ7Z7G0 1075 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 PIP4P1Q86T03 277 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 ZNF567Q8N184 647 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 HCAR2Q8TDS4 363 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 CXorf40AQ8TE69 158 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 NSMCE1Q8WV22 266 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 RAB7BQ96AH8 199 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 TADA1Q96BN2 335 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 TDRD1Q9BXT4 1180 aaKnown RBP12.5□□□□□ -0.41
APTX-220ENST00000476858 KLF15Q9UIH9 416 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 DMTF1Q9Y222 760 aa12.5□□□□□ -0.41
APTX-220ENST00000476858 KNL1Q8NG31 2342 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.49□□□□□ -0.41
APTX-220ENST00000476858 MED19A0JLT2 244 aaPredicted RBP12.49□□□□□ -0.41
APTX-220ENST00000476858 SCAMP1O15126 338 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 SOCS5O75159 536 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 SYPP08247 313 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 PIRTP0C851 137 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 NFKB1P19838 968 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 XPAP23025 273 aaPredicted RBP12.49□□□□□ -0.41
APTX-220ENST00000476858 HNF1BP35680 557 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 ATXN3P54252 364 aaPredicted RBP12.49□□□□□ -0.41
APTX-220ENST00000476858 C21orf59P57076 290 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 KLF1Q13351 362 aaPredicted RBP12.49□□□□□ -0.41
APTX-220ENST00000476858 FZD2Q14332 565 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 GALNT3Q14435 633 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 STAT4Q14765 748 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 TEAD4Q15561 434 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 CFAP58Q5T655 872 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 MEI1Q5TIA1 1274 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 DENND2CQ68D51 928 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 Q6ZSR6 202 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 PTAR1Q7Z6K3 402 aaPredicted RBP12.49□□□□□ -0.41
APTX-220ENST00000476858 RABEPKQ7Z6M1 372 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 RNF10Q8N5U6 811 aaKnown RBP12.49□□□□□ -0.41
APTX-220ENST00000476858 MFSD2AQ8NA29 543 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 TFB1MQ8WVM0 346 aaKnown RBP12.49□□□□□ -0.41
APTX-220ENST00000476858 ATG4AQ8WYN0 398 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 P3H4Q92791 437 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 IMP4Q96G21 291 aaKnown RBP12.49□□□□□ -0.41
APTX-220ENST00000476858 OXNAD1Q96HP4 312 aaPredicted RBP12.49□□□□□ -0.41
APTX-220ENST00000476858 TRIB3Q96RU7 358 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 RTKNQ9BST9 563 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 TCEAL2Q9H3H9 227 aaPredicted RBP12.49□□□□□ -0.41
APTX-220ENST00000476858 GLOD4Q9HC38 313 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 GPR27Q9NS67 375 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 TM7SF3Q9NS93 570 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 UCKL1Q9NWZ5 548 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 PYCARDQ9ULZ3 195 aa12.49□□□□□ -0.41
APTX-220ENST00000476858 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.49□□□□□ -0.41
APTX-220ENST00000476858 A0A1B0GTQ1 180 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 SPAARA0A1B0GVQ0 90 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 H7C0C1 242 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 APOC4-APOC2K7ER74 178 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 PPP1R12AO14974 1030 aaPredicted RBP12.48□□□□□ -0.41
APTX-220ENST00000476858 KRT86O43790 486 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 OPHN1O60890 802 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 TM7SF2O76062 418 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 RECQL5O94762 991 aaPredicted RBP12.48□□□□□ -0.41
APTX-220ENST00000476858 TOP3BO95985 862 aaKnown RBP12.48□□□□□ -0.41
APTX-220ENST00000476858 APOC2P02655 101 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 PCCBP05166 539 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 C1SP09871 688 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 AKT2P31751 481 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 ETV3P41162 512 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 ATP5OP48047 213 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 NR2C2P49116 596 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 PFN3P60673 137 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 COPS2P61201 443 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 EIF2B5Q13144 721 aaKnown RBP12.48□□□□□ -0.41
APTX-220ENST00000476858 SGCGQ13326 291 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 PUM1Q14671 1186 aaKnown RBP eCLIP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms