RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 INSIG1O15503 277 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 NKX2-8O15522 239 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 BUB1O43683 1085 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 KDELR3O43731 214 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 PCCBP05166 539 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 RHOQP17081 205 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 XPAP23025 273 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-213ENST00000476777 CDH5P33151 784 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-213ENST00000476777 CLCN1P35523 988 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 PPP1R2P41236 205 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 LIG3P49916 1009 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 KIAA1024LP59773 190 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 RAD51Q06609 339 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 MTM1Q13496 603 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 CLPPQ16740 277 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-213ENST00000476777 UGP2Q16851 508 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 RAB6CQ53S08 254 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 HIST2H2BCQ6DN03 193 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 RWDD4Q6NW29 188 aaKnown RBP11.44□□□□□ -0.58
BRCA1-213ENST00000476777 C17orf82Q86X59 251 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-213ENST00000476777 CACNA2D3Q8IZS8 1091 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 PLA2G15Q8NCC3 412 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 OR56A4Q8NGH8 313 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 CCL4L1Q8NHW4 92 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 FUBP1Q96AE4 644 aaKnown RBP11.44□□□□□ -0.58
BRCA1-213ENST00000476777 MIB2Q96AX9 1013 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 C18orf8Q96DM3 657 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 CCDC74BQ96LY2 380 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 CFAP57Q96MR6 1250 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 RAB6CQ9H0N0 254 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 DPEP2Q9H4A9 486 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 PCDH12Q9NPG4 1184 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 MRPL40Q9NQ50 206 aaKnown RBP11.44□□□□□ -0.58
BRCA1-213ENST00000476777 TMEM59LQ9UK28 342 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 AJAP1Q9UKB5 411 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-213ENST00000476777 MAN1B1Q9UKM7 699 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 CTNND2Q9UQB3 1225 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 C2CD3Q4AC94 2353 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 TSPAN11A1L157 253 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 ZSCAN5CA6NGD5 496 aaPredicted RBP11.43□□□□□ -0.58
BRCA1-213ENST00000476777 FAM72CH0Y354 149 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 FOXN3O00409 490 aaPredicted RBP11.43□□□□□ -0.58
BRCA1-213ENST00000476777 TNFRSF10CO14798 259 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 RAMP2O60895 175 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 PIGNO95427 931 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 IGSF6O95976 241 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 CD1CP29017 333 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 ALDH4A1P30038 563 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 CD97P48960 835 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 MAZP56270 477 aaKnown RBP11.43□□□□□ -0.58
BRCA1-213ENST00000476777 STX17P56962 302 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 RHOAP61586 193 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 NR1D2Q14995 579 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 INO80DQ53TQ3 878 aaPredicted RBP11.43□□□□□ -0.58
BRCA1-213ENST00000476777 C2CD6Q53TS8 623 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 FAM72AQ5TYM5 149 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 SMYD5Q6GMV2 418 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 FAM72DQ6L9T8 149 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 FAM72BQ86X60 149 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 TMEM35BQ8NCS4 154 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 HCAR2Q8TDS4 363 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 CASKIN2Q8WXE0 1202 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 ART4Q93070 314 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 ABHD17AQ96GS6 310 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 SLC45A3Q96JT2 553 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 DDA1Q9BW61 102 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 MAGEB5Q9BZ81 275 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 NOL6Q9H6R4 1146 aaKnown RBP11.43□□□□□ -0.58
BRCA1-213ENST00000476777 LRRC4CQ9HCJ2 640 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 SPATS2LQ9NUQ6 558 aaKnown RBP11.43□□□□□ -0.58
BRCA1-213ENST00000476777 MED13Q9UHV7 2174 aa11.43□□□□□ -0.58
BRCA1-213ENST00000476777 FAM170AA1A519 330 aa11.42□□□□□ -0.58
BRCA1-213ENST00000476777 CACNB4O00305 520 aaPredicted RBP11.42□□□□□ -0.58
BRCA1-213ENST00000476777 CAPN5O15484 640 aaPredicted RBP11.42□□□□□ -0.58
BRCA1-213ENST00000476777 DUX1O43812 170 aa11.42□□□□□ -0.58
BRCA1-213ENST00000476777 RAD1O60671 282 aa11.42□□□□□ -0.58
BRCA1-213ENST00000476777 LRIG2O94898 1065 aa11.42□□□□□ -0.58
BRCA1-213ENST00000476777 HOXC4P09017 264 aaPredicted RBP11.42□□□□□ -0.58
BRCA1-213ENST00000476777 PNMA6AP0CW24 399 aaPredicted RBP11.42□□□□□ -0.58
BRCA1-213ENST00000476777 PON1P27169 355 aa11.42□□□□□ -0.58
BRCA1-213ENST00000476777 ADRA1BP35368 520 aa11.42□□□□□ -0.58
BRCA1-213ENST00000476777 MMP12P39900 470 aa11.42□□□□□ -0.58
BRCA1-213ENST00000476777 LIMK2P53671 638 aa11.42□□□□□ -0.58
BRCA1-213ENST00000476777 ATP11AP98196 1134 aa11.42□□□□□ -0.58
BRCA1-213ENST00000476777 TRA2AQ13595 282 aaKnown RBP eCLIP11.42□□□□□ -0.58
BRCA1-213ENST00000476777 EXOC3L4Q17RC7 722 aa11.42□□□□□ -0.58
BRCA1-213ENST00000476777 GBP6Q6ZN66 633 aa11.42□□□□□ -0.58
BRCA1-213ENST00000476777 ARCQ7LC44 396 aa11.42□□□□□ -0.58
BRCA1-213ENST00000476777 ZSWIM9Q86XI8 627 aa11.42□□□□□ -0.58
BRCA1-213ENST00000476777 AGBL5Q8NDL9 886 aa11.42□□□□□ -0.58
BRCA1-213ENST00000476777 KIAA1524Q8TCG1 905 aa11.42□□□□□ -0.58
BRCA1-213ENST00000476777 TIGD1Q96MW7 591 aa11.42□□□□□ -0.58
BRCA1-213ENST00000476777 LGR4Q9BXB1 951 aa11.42□□□□□ -0.58
BRCA1-213ENST00000476777 KLC2Q9H0B6 622 aa11.42□□□□□ -0.58
BRCA1-213ENST00000476777 CYP4F12Q9HCS2 524 aa11.42□□□□□ -0.58
BRCA1-213ENST00000476777 HOOK1Q9UJC3 728 aaKnown RBP11.42□□□□□ -0.58
BRCA1-213ENST00000476777 DAAM1Q9Y4D1 1078 aa11.42□□□□□ -0.58
BRCA1-213ENST00000476777 ATP6V1DQ9Y5K8 247 aa11.42□□□□□ -0.58
BRCA1-213ENST00000476777 RHPN2P1A8MT19 583 aa11.41□□□□□ -0.58
BRCA1-213ENST00000476777 GOLGA8SH3BPF8 625 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms