RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 GEMP55040 296 aa29.7■■■□□ 2.34
HOXB3-208ENST00000476342 SPEM2Q0P670 501 aa29.7■■■□□ 2.34
HOXB3-208ENST00000476342 SGCGQ13326 291 aa29.7■■■□□ 2.34
HOXB3-208ENST00000476342 P3H1Q32P28 736 aa29.7■■■□□ 2.34
HOXB3-208ENST00000476342 RMDN1Q96DB5 314 aa29.7■■■□□ 2.34
HOXB3-208ENST00000476342 MCCC1Q96RQ3 725 aaPredicted RBP29.7■■■□□ 2.34
HOXB3-208ENST00000476342 ORAI3Q9BRQ5 295 aa29.7■■■□□ 2.34
HOXB3-208ENST00000476342 EBF2Q9HAK2 575 aa29.7■■■□□ 2.34
HOXB3-208ENST00000476342 DRG1Q9Y295 367 aaKnown RBP29.7■■■□□ 2.34
HOXB3-208ENST00000476342 AAR2Q9Y312 384 aaKnown RBP29.7■■■□□ 2.34
HOXB3-208ENST00000476342 A0A0J9YYE9 177 aa29.69■■■□□ 2.34
HOXB3-208ENST00000476342 GOLGA6L10A0A0M3HER8 536 aa29.69■■■□□ 2.34
HOXB3-208ENST00000476342 IGLON5A6NGN9 336 aa29.69■■■□□ 2.34
HOXB3-208ENST00000476342 ZNF185O15231 689 aa29.69■■■□□ 2.34
HOXB3-208ENST00000476342 MMP20O60882 483 aa29.69■■■□□ 2.34
HOXB3-208ENST00000476342 TRBC1P01850 177 aa29.69■■■□□ 2.34
HOXB3-208ENST00000476342 ELFN1P0C7U0 828 aa29.69■■■□□ 2.34
HOXB3-208ENST00000476342 PSMB4P28070 264 aa29.69■■■□□ 2.34
HOXB3-208ENST00000476342 VIPR1P32241 457 aa29.69■■■□□ 2.34
HOXB3-208ENST00000476342 CCDC70Q6NSX1 233 aa29.69■■■□□ 2.34
HOXB3-208ENST00000476342 PRELID2Q8N945 189 aa29.69■■■□□ 2.34
HOXB3-208ENST00000476342 C1orf216Q8TAB5 229 aa29.69■■■□□ 2.34
HOXB3-208ENST00000476342 KLK6Q92876 244 aa29.69■■■□□ 2.34
HOXB3-208ENST00000476342 SERAC1Q96JX3 654 aa29.69■■■□□ 2.34
HOXB3-208ENST00000476342 RIF1Q5UIP0 2472 aaKnown RBP29.68■■■□□ 2.34
HOXB3-208ENST00000476342 GOLGA6CA6NDK9 693 aa29.68■■■□□ 2.34
HOXB3-208ENST00000476342 GOLGA6BA6NDN3 693 aa29.68■■■□□ 2.34
HOXB3-208ENST00000476342 PRAMEF26H0Y7S4 382 aa29.68■■■□□ 2.34
HOXB3-208ENST00000476342 SLC31A1O15431 190 aa29.68■■■□□ 2.34
HOXB3-208ENST00000476342 IFNB1P01574 187 aa29.68■■■□□ 2.34
HOXB3-208ENST00000476342 GOLGA6DP0CG33 693 aa29.68■■■□□ 2.34
HOXB3-208ENST00000476342 HNRNPA2B1P22626 353 aaKnown RBP29.68■■■□□ 2.34
HOXB3-208ENST00000476342 RACK1P63244 317 aaKnown RBP29.68■■■□□ 2.34
HOXB3-208ENST00000476342 CCDC6Q16204 474 aa29.68■■■□□ 2.34
HOXB3-208ENST00000476342 NAPEPLDQ6IQ20 393 aa29.68■■■□□ 2.34
HOXB3-208ENST00000476342 CCDC89Q8N998 374 aa29.68■■■□□ 2.34
HOXB3-208ENST00000476342 ASB12Q8WXK4 309 aa29.68■■■□□ 2.34
HOXB3-208ENST00000476342 OXNAD1Q96HP4 312 aaPredicted RBP29.68■■■□□ 2.34
HOXB3-208ENST00000476342 TRIB3Q96RU7 358 aa29.68■■■□□ 2.34
HOXB3-208ENST00000476342 C1QTNF7Q9BXJ2 289 aa29.68■■■□□ 2.34
HOXB3-208ENST00000476342 C1QTNF2Q9BXJ5 285 aa29.68■■■□□ 2.34
HOXB3-208ENST00000476342 FSD1LQ9BXM9 530 aa29.68■■■□□ 2.34
HOXB3-208ENST00000476342 TM9SF3Q9HD45 589 aa29.68■■■□□ 2.34
HOXB3-208ENST00000476342 SEMA4GQ9NTN9 838 aa29.68■■■□□ 2.34
HOXB3-208ENST00000476342 GOLGA6AQ9NYA3 693 aa29.68■■■□□ 2.34
HOXB3-208ENST00000476342 EP300Q09472 2414 aaPredicted RBP29.67■■■□□ 2.34
HOXB3-208ENST00000476342 LRRK1Q38SD2 2015 aa29.67■■■□□ 2.34
HOXB3-208ENST00000476342 ANKRD66B4E2M5 251 aa29.67■■■□□ 2.34
HOXB3-208ENST00000476342 PAK4O96013 591 aaPredicted RBP29.67■■■□□ 2.34
HOXB3-208ENST00000476342 ZNF806P0C7X5 589 aa29.67■■■□□ 2.34
HOXB3-208ENST00000476342 CTPS1P17812 591 aa29.67■■■□□ 2.34
HOXB3-208ENST00000476342 CASQ1P31415 396 aa29.67■■■□□ 2.34
HOXB3-208ENST00000476342 AKT2P31751 481 aa29.67■■■□□ 2.34
HOXB3-208ENST00000476342 LIG3P49916 1009 aa29.67■■■□□ 2.34
HOXB3-208ENST00000476342 AFF3P51826 1226 aaKnown RBP29.67■■■□□ 2.34
HOXB3-208ENST00000476342 WNT3AP56704 352 aa29.67■■■□□ 2.34
HOXB3-208ENST00000476342 SEMG2Q02383 582 aa29.67■■■□□ 2.34
HOXB3-208ENST00000476342 RALGDSQ12967 914 aa29.67■■■□□ 2.34
HOXB3-208ENST00000476342 ARHGEF7Q14155 803 aa29.67■■■□□ 2.34
HOXB3-208ENST00000476342 PARP6Q2NL67 630 aa29.67■■■□□ 2.34
HOXB3-208ENST00000476342 TRIM61Q5EBN2 209 aa29.67■■■□□ 2.34
HOXB3-208ENST00000476342 KDELC1Q6UW63 502 aa29.67■■■□□ 2.34
HOXB3-208ENST00000476342 KDELC2Q7Z4H8 507 aa29.67■■■□□ 2.34
HOXB3-208ENST00000476342 DCLK2Q8N568 766 aa29.67■■■□□ 2.34
HOXB3-208ENST00000476342 GPR161Q8N6U8 529 aaKnown RBP29.67■■■□□ 2.34
HOXB3-208ENST00000476342 LRRC45Q96CN5 670 aa29.67■■■□□ 2.34
HOXB3-208ENST00000476342 MLPHQ9BV36 600 aaPredicted RBP29.67■■■□□ 2.34
HOXB3-208ENST00000476342 AP1M1Q9BXS5 423 aa29.67■■■□□ 2.34
HOXB3-208ENST00000476342 AASDHPPTQ9NRN7 309 aa29.67■■■□□ 2.34
HOXB3-208ENST00000476342 WDR87Q6ZQQ6 2873 aa29.66■■■□□ 2.34
HOXB3-208ENST00000476342 CAPN8A6NHC0 703 aa29.66■■■□□ 2.34
HOXB3-208ENST00000476342 NPIPB15A6NHN6 443 aaPredicted RBP29.66■■■□□ 2.34
HOXB3-208ENST00000476342 KHNYNO15037 678 aaKnown RBP29.66■■■□□ 2.34
HOXB3-208ENST00000476342 NDST3O95803 873 aa29.66■■■□□ 2.34
HOXB3-208ENST00000476342 CFIP05156 583 aa29.66■■■□□ 2.34
HOXB3-208ENST00000476342 ALPIP09923 528 aa29.66■■■□□ 2.34
HOXB3-208ENST00000476342 C6P13671 934 aa29.66■■■□□ 2.34
HOXB3-208ENST00000476342 GALNT3Q14435 633 aa29.66■■■□□ 2.34
HOXB3-208ENST00000476342 CSRP2Q16527 193 aa29.66■■■□□ 2.34
HOXB3-208ENST00000476342 SLC23A3Q6PIS1 610 aa29.66■■■□□ 2.34
HOXB3-208ENST00000476342 SYT10Q6XYQ8 523 aa29.66■■■□□ 2.34
HOXB3-208ENST00000476342 LIPIQ6XZB0 460 aa29.66■■■□□ 2.34
HOXB3-208ENST00000476342 GSTA5Q7RTV2 222 aa29.66■■■□□ 2.34
HOXB3-208ENST00000476342 IPMKQ8NFU5 416 aa29.66■■■□□ 2.34
HOXB3-208ENST00000476342 MRGPRX2Q96LB1 330 aa29.66■■■□□ 2.34
HOXB3-208ENST00000476342 SLC6A18Q96N87 628 aa29.66■■■□□ 2.34
HOXB3-208ENST00000476342 NUSAP1Q9BXS6 441 aaKnown RBP29.66■■■□□ 2.34
HOXB3-208ENST00000476342 SMARCAL1Q9NZC9 954 aa29.66■■■□□ 2.34
HOXB3-208ENST00000476342 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.66■■■□□ 2.34
HOXB3-208ENST00000476342 FAM186AA6NE01 2351 aa29.66■■■□□ 2.34
HOXB3-208ENST00000476342 A8MX80 341 aa29.65■■■□□ 2.34
HOXB3-208ENST00000476342 LZTS3O60299 673 aaPredicted RBP29.65■■■□□ 2.34
HOXB3-208ENST00000476342 FOXD2O60548 495 aaPredicted RBP29.65■■■□□ 2.34
HOXB3-208ENST00000476342 EPOP01588 193 aa29.65■■■□□ 2.34
HOXB3-208ENST00000476342 LMNB2Q03252 620 aa29.65■■■□□ 2.34
HOXB3-208ENST00000476342 FGL2Q14314 439 aa29.65■■■□□ 2.34
HOXB3-208ENST00000476342 TEAD4Q15561 434 aa29.65■■■□□ 2.34
HOXB3-208ENST00000476342 QPCTQ16769 361 aa29.65■■■□□ 2.34
HOXB3-208ENST00000476342 NYAP1Q6ZVC0 841 aa29.65■■■□□ 2.34
HOXB3-208ENST00000476342 C12orf50Q8NA57 414 aaPredicted RBP29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms