RNA–Protein interactions for RNA: ENST00000476098.5

BEST3-204, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 1,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-204ENST00000476098 ZXDAP98168 799 aa11.69□□□□□ -0.54
BEST3-204ENST00000476098 SATB1Q01826 763 aa11.69□□□□□ -0.54
BEST3-204ENST00000476098 LRRC32Q14392 662 aa11.69□□□□□ -0.54
BEST3-204ENST00000476098 GAS6Q14393 721 aa11.69□□□□□ -0.54
BEST3-204ENST00000476098 CDKN3Q16667 212 aa11.69□□□□□ -0.54
BEST3-204ENST00000476098 EOGTQ5NDL2 527 aa11.69□□□□□ -0.54
BEST3-204ENST00000476098 CES3Q6UWW8 571 aa11.69□□□□□ -0.54
BEST3-204ENST00000476098 TMEM92Q6UXU6 159 aa11.69□□□□□ -0.54
BEST3-204ENST00000476098 UNC5AQ6ZN44 842 aa11.69□□□□□ -0.54
BEST3-204ENST00000476098 TMEM135Q86UB9 458 aa11.69□□□□□ -0.54
BEST3-204ENST00000476098 CCNJLQ8IV13 435 aa11.69□□□□□ -0.54
BEST3-204ENST00000476098 PALM2Q8IXS6 379 aa11.69□□□□□ -0.54
BEST3-204ENST00000476098 PAF1Q8N7H5 531 aa11.69□□□□□ -0.54
BEST3-204ENST00000476098 MDGA1Q8NFP4 955 aa11.69□□□□□ -0.54
BEST3-204ENST00000476098 PTCD2Q8WV60 388 aaKnown RBP11.69□□□□□ -0.54
BEST3-204ENST00000476098 ARRDC3Q96B67 414 aa11.69□□□□□ -0.54
BEST3-204ENST00000476098 FCRL3Q96P31 734 aaPredicted RBP11.69□□□□□ -0.54
BEST3-204ENST00000476098 MCCC1Q96RQ3 725 aaPredicted RBP11.69□□□□□ -0.54
BEST3-204ENST00000476098 NAT9Q9BTE0 207 aa11.69□□□□□ -0.54
BEST3-204ENST00000476098 TBC1D17Q9HA65 648 aa11.69□□□□□ -0.54
BEST3-204ENST00000476098 SAMD15Q9P1V8 674 aa11.69□□□□□ -0.54
BEST3-204ENST00000476098 MMP17Q9ULZ9 603 aa11.69□□□□□ -0.54
BEST3-204ENST00000476098 SOX13Q9UN79 622 aa11.69□□□□□ -0.54
BEST3-204ENST00000476098 TCAF1Q9Y4C2 921 aa11.69□□□□□ -0.54
BEST3-204ENST00000476098 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.69□□□□□ -0.54
BEST3-204ENST00000476098 A0A0U1RQS6 177 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 HEATR9A2RTY3 570 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 CHURC1-FNTBB4DL54 471 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 C1QTNF3-AMACRE9PGA6 284 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 RNASEH1O60930 286 aaKnown RBP11.68□□□□□ -0.54
BEST3-204ENST00000476098 ACSL3O95573 720 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 SSTR1P30872 391 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 PSMD8P48556 350 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 RPS14P62263 151 aaKnown RBP11.68□□□□□ -0.54
BEST3-204ENST00000476098 SEPT6Q14141 434 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 CST6Q15828 149 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 CRY1Q16526 586 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 TJAP1Q5JTD0 557 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 SPDYCQ5MJ68 293 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 FAM46CQ5VWP2 391 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 ARMC3Q5W041 872 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 STEAP4Q687X5 459 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 C3orf62Q6ZUJ4 267 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 PARS2Q7L3T8 475 aaKnown RBP11.68□□□□□ -0.54
BEST3-204ENST00000476098 TTC7BQ86TV6 843 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 PPHLN1Q8NEY8 458 aaKnown RBP11.68□□□□□ -0.54
BEST3-204ENST00000476098 MFSD3Q96ES6 412 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 CFAP36Q96G28 342 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 TTC25Q96NG3 672 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 LYSMD1Q96S90 227 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 FBRSQ9HAH7 460 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 MRM3Q9HC36 420 aaKnown RBP11.68□□□□□ -0.54
BEST3-204ENST00000476098 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.68□□□□□ -0.54
BEST3-204ENST00000476098 KCTD3Q9Y597 815 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 ARL5AQ9Y689 179 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 RPS6KL1Q9Y6S9 549 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 ZCWPW2A0A1B0GU75 182 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 CAPN8A6NHC0 703 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 NPIPB15A6NHN6 443 aaPredicted RBP11.68□□□□□ -0.54
BEST3-204ENST00000476098 UPK3BL1B0FP48 263 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 UPK3BL2E5RIL1 263 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 USP1O94782 785 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 POLBP06746 335 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 TSHRP16473 764 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 NMBRP28336 390 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 SEMG2Q02383 582 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 SLC29A2Q14542 456 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 CRYMQ14894 314 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 TAF1AQ15573 450 aaPredicted RBP11.68□□□□□ -0.54
BEST3-204ENST00000476098 ANKRD20A4Q4UJ75 823 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 LRRC73Q5JTD7 316 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 TSTD2Q5T7W7 516 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 ESRP1Q6NXG1 681 aaKnown RBP11.68□□□□□ -0.54
BEST3-204ENST00000476098 CAPN12Q6ZSI9 719 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 USP45Q70EL2 814 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 GLT6D1Q7Z4J2 308 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 TMPRSS6Q8IU80 811 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.68□□□□□ -0.54
BEST3-204ENST00000476098 NDUFAF2Q8N183 169 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 TTC30BQ8N4P2 665 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 UBLCP1Q8WVY7 318 aaPredicted RBP11.68□□□□□ -0.54
BEST3-204ENST00000476098 CLDN23Q96B33 292 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 EID2BQ96D98 161 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 PPP1R16AQ96I34 528 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 SRPK1Q96SB4 655 aaKnown RBP11.68□□□□□ -0.54
BEST3-204ENST00000476098 HDAC8Q9BY41 377 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 OSBPL6Q9BZF3 934 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 SLC6A17Q9H1V8 727 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 TRABDQ9H4I3 376 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 PCDH12Q9NPG4 1184 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 TREX1Q9NSU2 369 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 HACD3Q9P035 362 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 SLC2A6Q9UGQ3 507 aa11.68□□□□□ -0.54
BEST3-204ENST00000476098 TCF20Q9UGU0 1960 aaKnown RBP11.68□□□□□ -0.54
BEST3-204ENST00000476098 CCDC78A2IDD5 438 aa11.67□□□□□ -0.54
BEST3-204ENST00000476098 A8MX80 341 aa11.67□□□□□ -0.54
BEST3-204ENST00000476098 PLK4O00444 970 aa11.67□□□□□ -0.54
BEST3-204ENST00000476098 MID1O15344 667 aa11.67□□□□□ -0.54
BEST3-204ENST00000476098 BUD23O43709 281 aaKnown RBP11.67□□□□□ -0.54
BEST3-204ENST00000476098 PAPSS2O95340 614 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms