RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 CRTAMO95727 393 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 IGSF6O95976 241 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 CPP00450 1065 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 FGF1P05230 155 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 FAM153BP0C7A2 387 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 PGAM1P18669 254 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 NFKB1P19838 968 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 CNTFP26441 200 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 PSMB4P28070 264 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 CD68P34810 354 aaPredicted RBP7.08□□□□□ -1.28
SHQ1-207ENST00000475558 ACVRL1P37023 503 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 PPARGP37231 505 aaPredicted RBP7.08□□□□□ -1.28
SHQ1-207ENST00000475558 MPLP40238 635 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 HADHAP40939 763 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 CSKP41240 450 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 GRIA2P42262 883 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 MAGEA3P43357 314 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 TNFRSF4P43489 277 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 POLD2P49005 469 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 DGKGP49619 791 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 SERPINH1P50454 418 aaKnown RBP7.08□□□□□ -1.28
SHQ1-207ENST00000475558 SUOXP51687 545 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 GRSF1Q12849 480 aaKnown RBP eCLIP7.08□□□□□ -1.28
SHQ1-207ENST00000475558 LMAN2Q12907 356 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 CYTH1Q15438 398 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 KYNUQ16719 465 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 SKIDA1Q1XH10 827 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 BBS9Q3SYG4 887 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 FAM153CQ494X1 144 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 PITRM1Q5JRX3 1037 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 SPANXN3Q5MJ09 141 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 STXBP5Q5T5C0 1151 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 ZDHHC20Q5W0Z9 365 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 GRAMD4Q6IC98 578 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 TAOK1Q7L7X3 1001 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 SRLQ86TD4 932 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 CAND1Q86VP6 1230 aaKnown RBP7.08□□□□□ -1.28
SHQ1-207ENST00000475558 TDRPQ86YL5 185 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 ARFGAP2Q8N6H7 521 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 GLIS1Q8NBF1 620 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 OR7D4Q8NG98 312 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 TTC8Q8TAM2 541 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 CALML6Q8TD86 181 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 BRSK1Q8TDC3 778 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 TADA1Q96BN2 335 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 STAMBPL1Q96FJ0 436 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 ZFYVE19Q96K21 471 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 LMLNQ96KR4 655 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 SIGLEC10Q96LC7 697 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 PRICKLE1Q96MT3 831 aaPredicted RBP7.08□□□□□ -1.28
SHQ1-207ENST00000475558 LRRC3BQ96PB8 259 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 SEMA3CQ99985 751 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 TBL1YQ9BQ87 522 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 OSBPL1AQ9BXW6 950 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 C10orf88Q9H8K7 445 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 ECT2Q9H8V3 914 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 OGFRQ9NZT2 677 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 SENP1Q9P0U3 644 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 ZC3H7BQ9UGR2 993 aaKnown RBP7.08□□□□□ -1.28
SHQ1-207ENST00000475558 GGA2Q9UJY4 613 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 CCL26Q9Y258 94 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 TEX264Q9Y6I9 313 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 FAM169AQ9Y6X4 670 aa7.08□□□□□ -1.28
SHQ1-207ENST00000475558 IQANK1A0A1B0GTG1 560 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 C2orf81A6NN90 581 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 C1QTNF9BB2RNN3 333 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 HMGB1P1B2RPK0 211 aaPredicted RBP7.07□□□□□ -1.28
SHQ1-207ENST00000475558 NEDD8-MDP1E9PL57 170 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 RASGRF2O14827 1237 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 ATP9BO43861 1147 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 CDH16O75309 829 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 USP1O94782 785 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 ALDH1A2O94788 518 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 NDST3O95803 873 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 HLA-DQB2P05538 268 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 DLDP09622 509 aaKnown RBP7.07□□□□□ -1.28
SHQ1-207ENST00000475558 CISD3P0C7P0 127 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 C1QTNF9P0C862 333 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 MYBL2P10244 700 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 CR2P20023 1033 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 MZF1P28698 734 aaPredicted RBP7.07□□□□□ -1.28
SHQ1-207ENST00000475558 SERPINA4P29622 427 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 ADRA1AP35348 466 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 ELK3P41970 407 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 MSH2P43246 934 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 PXNP49023 591 aaPredicted RBP7.07□□□□□ -1.28
SHQ1-207ENST00000475558 SERPINB9P50453 376 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 SCNN1BP51168 640 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 NOVA1P51513 510 aaKnown RBP7.07□□□□□ -1.28
SHQ1-207ENST00000475558 WNT3AP56704 352 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 RHOAP61586 193 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 SKOR1P84550 965 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 BCL2L1Q07817 233 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 ZBTB17Q13105 803 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 UGP2Q16851 508 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 MYLK3Q32MK0 819 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 PLK5Q496M5 336 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 FBXO43Q4G163 708 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 CARD16Q5EG05 197 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 FSCBQ5H9T9 825 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms