RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 XRCC4Q13426 336 aa16.31■□□□□ 0.2
SRM-204ENST00000475189 MEI1Q5TIA1 1274 aa16.31■□□□□ 0.2
SRM-204ENST00000475189 CCDC181Q5TID7 509 aa16.31■□□□□ 0.2
SRM-204ENST00000475189 LIPIQ6XZB0 460 aa16.31■□□□□ 0.2
SRM-204ENST00000475189 ABI3BPQ7Z7G0 1075 aa16.31■□□□□ 0.2
SRM-204ENST00000475189 SPATS2Q86XZ4 545 aaKnown RBP16.31■□□□□ 0.2
SRM-204ENST00000475189 DENND6BQ8NEG7 585 aa16.31■□□□□ 0.2
SRM-204ENST00000475189 ACTL9Q8TC94 416 aa16.31■□□□□ 0.2
SRM-204ENST00000475189 UBE2Q2Q8WVN8 375 aa16.31■□□□□ 0.2
SRM-204ENST00000475189 PIH1D2Q8WWB5 315 aa16.31■□□□□ 0.2
SRM-204ENST00000475189 CENPTQ96BT3 561 aa16.31■□□□□ 0.2
SRM-204ENST00000475189 KLHDC7BQ96G42 594 aa16.31■□□□□ 0.2
SRM-204ENST00000475189 AGAP3Q96P47 875 aa16.31■□□□□ 0.2
SRM-204ENST00000475189 QKIQ96PU8 341 aaKnown RBP eCLIP16.31■□□□□ 0.2
SRM-204ENST00000475189 TDRD1Q9BXT4 1180 aaKnown RBP16.31■□□□□ 0.2
SRM-204ENST00000475189 KCNF1Q9H3M0 494 aa16.31■□□□□ 0.2
SRM-204ENST00000475189 B4GALT6Q9UBX8 382 aa16.31■□□□□ 0.2
SRM-204ENST00000475189 FNDC3AQ9Y2H6 1198 aaKnown RBP16.31■□□□□ 0.2
SRM-204ENST00000475189 PPIL1Q9Y3C6 166 aa16.31■□□□□ 0.2
SRM-204ENST00000475189 DCHS1Q96JQ0 3298 aa16.31■□□□□ 0.2
SRM-204ENST00000475189 CFAP69A5D8W1 941 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 POM121BA6NF01 834 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 A8MX80 341 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 MTSS1O43312 755 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 MAGEC1O60732 1142 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 TJP3O95049 919 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 PRLP01236 227 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 ZNF883P0CG24 379 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 THEGLP0DJG4 465 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 C6P13671 934 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 CD59P13987 128 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 CD86P42081 329 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 SKOR1P84550 965 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 PRAMEF14Q5SWL7 426 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 OR13H1Q8NG92 308 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 FAM174AQ8TBP5 190 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 HTR3CQ8WXA8 447 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 SCRN2Q96FV2 425 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 IMP4Q96G21 291 aaKnown RBP16.3■□□□□ 0.2
SRM-204ENST00000475189 TEKT5Q96M29 485 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 SLC25A51Q9H1U9 297 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 C10orf88Q9H8K7 445 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 GLOD4Q9HC38 313 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 GDF3Q9NR23 364 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 CHKBQ9Y259 395 aa16.3■□□□□ 0.2
SRM-204ENST00000475189 A6NNZ2 444 aa16.29■□□□□ 0.2
SRM-204ENST00000475189 H7C0C1 242 aa16.29■□□□□ 0.2
SRM-204ENST00000475189 FPGTO14772 594 aa16.29■□□□□ 0.2
SRM-204ENST00000475189 PTMAP06454 111 aaKnown RBP16.29■□□□□ 0.2
SRM-204ENST00000475189 GM2AP17900 193 aa16.29■□□□□ 0.2
SRM-204ENST00000475189 RBL1P28749 1068 aa16.29■□□□□ 0.2
SRM-204ENST00000475189 VIPR1P32241 457 aa16.29■□□□□ 0.2
SRM-204ENST00000475189 CD68P34810 354 aaPredicted RBP16.29■□□□□ 0.2
SRM-204ENST00000475189 ATP5OP48047 213 aa16.29■□□□□ 0.2
SRM-204ENST00000475189 SLC14A1Q13336 389 aa16.29■□□□□ 0.2
SRM-204ENST00000475189 GSE1Q14687 1217 aa16.29■□□□□ 0.2
SRM-204ENST00000475189 AGERQ15109 404 aa16.29■□□□□ 0.2
SRM-204ENST00000475189 PTPRRQ15256 657 aa16.29■□□□□ 0.2
SRM-204ENST00000475189 KYAT3Q6YP21 454 aaKnown RBP16.29■□□□□ 0.2
SRM-204ENST00000475189 TP53I13Q8NBR0 393 aaPredicted RBP16.29■□□□□ 0.2
SRM-204ENST00000475189 TADA1Q96BN2 335 aa16.29■□□□□ 0.2
SRM-204ENST00000475189 ALS2CR12Q96Q35 445 aa16.29■□□□□ 0.2
SRM-204ENST00000475189 MCCC1Q96RQ3 725 aaPredicted RBP16.29■□□□□ 0.2
SRM-204ENST00000475189 RBM15Q96T37 977 aaKnown RBP eCLIP16.29■□□□□ 0.2
SRM-204ENST00000475189 ELF4Q99607 663 aaPredicted RBP16.29■□□□□ 0.2
SRM-204ENST00000475189 FAM118BQ9BPY3 351 aa16.29■□□□□ 0.2
SRM-204ENST00000475189 PCDH9Q9HC56 1237 aa16.29■□□□□ 0.2
SRM-204ENST00000475189 MBNL1Q9NR56 388 aaKnown RBP16.29■□□□□ 0.2
SRM-204ENST00000475189 TM7SF3Q9NS93 570 aa16.29■□□□□ 0.2
SRM-204ENST00000475189 A0A1B0GTQ1 180 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 NPIPB15A6NHN6 443 aaPredicted RBP16.28■□□□□ 0.2
SRM-204ENST00000475189 LZTS3O60299 673 aaPredicted RBP16.28■□□□□ 0.2
SRM-204ENST00000475189 DFNA5O60443 496 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 ALPIP09923 528 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 ELFN1P0C7U0 828 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 RBP3P10745 1247 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 CYP2A6P11509 494 aaPredicted RBP16.28■□□□□ 0.2
SRM-204ENST00000475189 CTPS1P17812 591 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 CA4P22748 312 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 NFKBIAP25963 317 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 IGFALSP35858 605 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 EIF3EP60228 445 aaKnown RBP16.28■□□□□ 0.2
SRM-204ENST00000475189 KLF1Q13351 362 aaPredicted RBP16.28■□□□□ 0.2
SRM-204ENST00000475189 RPS6KA1Q15418 735 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 SHBQ15464 509 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 CNGA3Q16281 694 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 WSCD2Q2TBF2 565 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 KDM7AQ6ZMT4 941 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 Q6ZSR6 202 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 PTAR1Q7Z6K3 402 aaPredicted RBP16.28■□□□□ 0.2
SRM-204ENST00000475189 PIP4P1Q86T03 277 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 ZNF567Q8N184 647 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 SLC22A18ASQ8N1D0 253 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 CBARPQ8N350 705 aaPredicted RBP16.28■□□□□ 0.2
SRM-204ENST00000475189 SPATA22Q8NHS9 363 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 SMIM14Q96QK8 99 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 VAT1Q99536 393 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 C1QTNF7Q9BXJ2 289 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 ERVMER34-1Q9H9K5 563 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 GPR27Q9NS67 375 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms