RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 GALNT10Q86SR1 603 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 DPP9Q86TI2 863 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 SNX32Q86XE0 403 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 C4orf19Q8IY42 314 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.13□□□□□ -1.75
USP16-205ENST00000474835 EIF4E3Q8N5X7 224 aaKnown RBP4.13□□□□□ -1.75
USP16-205ENST00000474835 TRPV3Q8NET8 790 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 FBXL8Q96CD0 374 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 GPRASP2Q96D09 838 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 TEPSINQ96N21 525 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 HERC2P3Q9BVR0 1158 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 CCDC68Q9H2F9 335 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 CASS4Q9NQ75 786 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 VPS51Q9UID3 782 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 ZDHHC2Q9UIJ5 367 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 ZNF112Q9UJU3 913 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 WBP11Q9Y2W2 641 aaKnown RBP4.13□□□□□ -1.75
USP16-205ENST00000474835 CCL27Q9Y4X3 112 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 NME7Q9Y5B8 376 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 A0A075B6Q4 140 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 AGAP5A6NIR3 686 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 OR6C65A6NJZ3 312 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 CLIC2O15247 247 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 KLHL41O60662 606 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 ATG13O75143 517 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 PIAS1O75925 651 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 METTL18O95568 372 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 ASS1P00966 412 aaKnown RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 NPPAP01160 153 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 KRT6AP02538 564 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 AHSGP02765 367 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 KRT6BP04259 564 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 KRT10P13645 584 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 CCNA2P20248 432 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 MAPK4P31152 587 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 RRM2P31350 389 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 TALDO1P37837 337 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 KRT6CP48668 564 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 GLUD2P49448 558 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 TPTEP56180 551 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 MRPS22P82650 360 aaKnown RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 OTUD4Q01804 1114 aaKnown RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 TAGLNQ01995 201 aaKnown RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 CCDC6Q16204 474 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 NKG7Q16617 165 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 TMEM65Q6PI78 240 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 KSR1Q8IVT5 923 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 CLEC4FQ8N1N0 589 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 NATD1Q8N6N6 113 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 PSD4Q8NDX1 1056 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 ACVR1CQ8NER5 493 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 ACTL9Q8TC94 416 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 DYDC1Q8WWB3 177 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 CLEC4DQ8WXI8 215 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 FATE1Q969F0 183 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 CENPNQ96H22 339 aaPredicted RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 FAM84AQ96KN4 292 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 CCDC138Q96M89 665 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 MCCC1Q96RQ3 725 aaPredicted RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 IDI2Q9BXS1 227 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 RHOBTB2Q9BYZ6 727 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 ZCCHC4Q9H5U6 513 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 GORASP2Q9H8Y8 452 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 TCF7L2Q9NQB0 619 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 MRGBPQ9NV56 204 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 IFT80Q9P2H3 777 aaPredicted RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 SEPT3Q9UH03 358 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 GRIP1Q9Y3R0 1128 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 DNAH14Q0VDD8 3507 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 COL4A3Q01955 1670 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 C2CD4BA6NLJ0 364 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 BBIP1A8MTZ0 92 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 STX16-NPEPL1H3BU86 382 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 NRP1O14786 923 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 HDAC3O15379 428 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 XPOTO43592 962 aaKnown RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 TLL1O43897 1013 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 ZNF780AO75290 641 aaPredicted RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 TRIM3O75382 744 aaPredicted RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 FOSP01100 380 aaPredicted RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 GPIP06744 558 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 SLC35E2BP0CK96 405 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 SLC6A2P23975 617 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 HTR1EP28566 365 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 PIK3CBP42338 1070 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 PRELPP51888 382 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 TNFAIP2Q03169 654 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 KDSRQ06136 332 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 TRIM32Q13049 653 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 ZBTB17Q13105 803 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 SNX17Q15036 470 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 DPYSL2Q16555 572 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 QRICH1Q2TAL8 776 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 CEP78Q5JTW2 689 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 REP15Q6BDI9 236 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 KCNT2Q6UVM3 1135 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 CCBE1Q6UXH8 406 aaPredicted RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 DLEU7Q6UYE1 221 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 PRR23BQ6ZRT6 265 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 HACE1Q8IYU2 909 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms