RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 KHNYNO15037 678 aaKnown RBP17.01■□□□□ 0.31
SCAF11-206ENST00000474828 FANCGO15287 622 aa17.01■□□□□ 0.31
SCAF11-206ENST00000474828 KCNN4O15554 427 aa17.01■□□□□ 0.31
SCAF11-206ENST00000474828 NEBLO76041 1014 aa17.01■□□□□ 0.31
SCAF11-206ENST00000474828 HNRNPA2B1P22626 353 aaKnown RBP17.01■□□□□ 0.31
SCAF11-206ENST00000474828 NFKBIAP25963 317 aa17.01■□□□□ 0.31
SCAF11-206ENST00000474828 CXCR5P32302 372 aa17.01■□□□□ 0.31
SCAF11-206ENST00000474828 IRX4P78413 519 aa17.01■□□□□ 0.31
SCAF11-206ENST00000474828 TRIM61Q5EBN2 209 aa17.01■□□□□ 0.31
SCAF11-206ENST00000474828 LRRC73Q5JTD7 316 aa17.01■□□□□ 0.31
SCAF11-206ENST00000474828 LIPIQ6XZB0 460 aa17.01■□□□□ 0.31
SCAF11-206ENST00000474828 PID1Q7Z2X4 250 aa17.01■□□□□ 0.31
SCAF11-206ENST00000474828 ZCCHC9Q8N567 271 aaKnown RBP17.01■□□□□ 0.31
SCAF11-206ENST00000474828 MFSD2AQ8NA29 543 aa17.01■□□□□ 0.31
SCAF11-206ENST00000474828 SPATA22Q8NHS9 363 aa17.01■□□□□ 0.31
SCAF11-206ENST00000474828 ATG4AQ8WYN0 398 aa17.01■□□□□ 0.31
SCAF11-206ENST00000474828 WDR24Q96S15 920 aa17.01■□□□□ 0.31
SCAF11-206ENST00000474828 OSBPL9Q96SU4 736 aa17.01■□□□□ 0.31
SCAF11-206ENST00000474828 HOMER3Q9NSC5 361 aa17.01■□□□□ 0.31
SCAF11-206ENST00000474828 KLHL8Q9P2G9 620 aaPredicted RBP17.01■□□□□ 0.31
SCAF11-206ENST00000474828 B4GALT6Q9UBX8 382 aa17.01■□□□□ 0.31
SCAF11-206ENST00000474828 FAM153AQ9UHL3 310 aa17.01■□□□□ 0.31
SCAF11-206ENST00000474828 SDK1Q7Z5N4 2213 aa17.01■□□□□ 0.31
SCAF11-206ENST00000474828 CAPN8A6NHC0 703 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 CEP104O60308 925 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 PLXNA2O75051 1894 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 HEXIM1O94992 359 aaKnown RBP17■□□□□ 0.31
SCAF11-206ENST00000474828 MT-CYBP00156 380 aaPredicted RBP17■□□□□ 0.31
SCAF11-206ENST00000474828 WNT1P04628 370 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 LHCGRP22888 699 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 VIPR1P32241 457 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 LIG3P49916 1009 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 LIMK1P53667 647 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 CDK18Q07002 472 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 MPP3Q13368 585 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 CYP1B1Q16678 543 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 QPCTQ16769 361 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 FAM182AQ5T1J6 154 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 ITPRIPL1Q6GPH6 555 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 PRELID2Q8N945 189 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 SERAC1Q96JX3 654 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 MRGPRX2Q96LB1 330 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 BMFQ96LC9 184 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 COQ10AQ96MF6 247 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 SLC6A18Q96N87 628 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 PPP1R2P1Q96PQ5 205 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 ADGRE3Q9BY15 652 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 KCTD5Q9NXV2 234 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 CHKBQ9Y259 395 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 TTLL3Q9Y4R7 772 aa17■□□□□ 0.31
SCAF11-206ENST00000474828 NPIPB15A6NHN6 443 aaPredicted RBP16.99■□□□□ 0.31
SCAF11-206ENST00000474828 NEMP1O14524 444 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 ARHGAP33O14559 1287 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 TOR1BO14657 336 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 RAD51BO15315 384 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 MMP20O60882 483 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 TM7SF2O76062 418 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 STK10O94804 968 aaKnown RBP16.99■□□□□ 0.31
SCAF11-206ENST00000474828 PAK4O96013 591 aaPredicted RBP16.99■□□□□ 0.31
SCAF11-206ENST00000474828 CYP2A6P11509 494 aaPredicted RBP16.99■□□□□ 0.31
SCAF11-206ENST00000474828 C6P13671 934 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 ZNF30P17039 623 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 TCP1P17987 556 aaKnown RBP16.99■□□□□ 0.31
SCAF11-206ENST00000474828 XPAP23025 273 aaPredicted RBP16.99■□□□□ 0.31
SCAF11-206ENST00000474828 CD38P28907 300 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 MAT2AP31153 395 aaKnown RBP16.99■□□□□ 0.31
SCAF11-206ENST00000474828 ADRA1AP35348 466 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 HNF1BP35680 557 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 CTSKP43235 329 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 GDF10P55107 478 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 GNG11P61952 73 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 FOXK2Q01167 660 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 SF3A2Q15428 464 aaKnown RBP16.99■□□□□ 0.31
SCAF11-206ENST00000474828 CCDC6Q16204 474 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 CNGA3Q16281 694 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 PARP6Q2NL67 630 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 P3H1Q32P28 736 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 KCTD11Q693B1 232 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 TCEAL6Q6IPX3 200 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 RANBP10Q6VN20 620 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 GCNT7Q6ZNI0 430 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 USP45Q70EL2 814 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 NLRP8Q86W28 1048 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 NDUFAF2Q8N183 169 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 FAM71DQ8N9W8 422 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 C12orf50Q8NA57 414 aaPredicted RBP16.99■□□□□ 0.31
SCAF11-206ENST00000474828 TP53I13Q8NBR0 393 aaPredicted RBP16.99■□□□□ 0.31
SCAF11-206ENST00000474828 CXorf40AQ8TE69 158 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 COG1Q8WTW3 980 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 C1orf54Q8WWF1 131 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 TCEAL3Q969E4 200 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 TMEM121Q9BTD3 319 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 NUSAP1Q9BXS6 441 aaKnown RBP16.99■□□□□ 0.31
SCAF11-206ENST00000474828 SMOC1Q9H4F8 434 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 ERVMER34-1Q9H9K5 563 aa16.99■□□□□ 0.31
SCAF11-206ENST00000474828 GON4LQ3T8J9 2241 aa16.98■□□□□ 0.31
SCAF11-206ENST00000474828 CDX4O14627 284 aaPredicted RBP16.98■□□□□ 0.31
SCAF11-206ENST00000474828 ANXA9O76027 345 aa16.98■□□□□ 0.31
SCAF11-206ENST00000474828 NDST3O95803 873 aa16.98■□□□□ 0.31
SCAF11-206ENST00000474828 PRKCGP05129 697 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms