RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 ATP6AP2A0A1C7CYW4 349 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 ARPC2O15144 300 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 NDUFB5O43674 189 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 ATP6AP2O75787 350 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 HSD17B1P14061 328 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 GFAPP14136 432 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 TGM1P22735 817 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 ATICP31939 592 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 ARCN1P48444 511 aaKnown RBP18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 RAB10P61026 200 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 OCA2Q04671 838 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 PSMD5Q16401 504 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 MFSD6LQ8IWD5 586 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 GOLM1Q8NBJ4 401 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 SGCDQ92629 289 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 CYP4F12Q9HCS2 524 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 ZNF277Q9NRM2 450 aaPredicted RBP18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 TMPRSS4Q9NRS4 437 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 KIAA1257Q9ULG3 409 aa18.7■□□□□ 0.58
ECHDC1-214ENST00000474289 MYO1DO94832 1006 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 SELENBP1Q13228 472 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 CYP51A1Q16850 503 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 PGS1Q32NB8 556 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 CUZD1Q86UP6 607 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 ANKRD13BQ86YJ7 626 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 PARP8Q8N3A8 854 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 MINDY2Q8NBR6 621 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 FKBP10Q96AY3 582 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 IGKV6D-21A0A0A0MT36 114 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 A8MU76 341 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 ABCB7O75027 752 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 BCAS1O75363 584 aaPredicted RBP18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 FCGR1AP12314 374 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 PTPN3P26045 913 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 LEPRP48357 1165 aaKnown RBP18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 DNAJB13P59910 316 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 EN1Q05925 392 aaPredicted RBP18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 BNIP2Q12982 314 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 CAPRIN1Q14444 709 aaKnown RBP18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 INAVAQ3KP66 663 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 KCTD11Q693B1 232 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 CYHR1Q6ZMK1 362 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 DSG4Q86SJ6 1040 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 REPS2Q8NFH8 660 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 AFG1LQ8WV93 481 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 WDR12Q9GZL7 423 aaKnown RBP18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 VTA1Q9NP79 307 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 NRBP2Q9NSY0 501 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 CMTM6Q9NX76 183 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 KLHL3Q9UH77 587 aa18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 ZNF214Q9UL59 606 aaPredicted RBP18.69■□□□□ 0.58
ECHDC1-214ENST00000474289 INO80B-WBP1J3KQ70 363 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 NR5A2O00482 541 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 INPP4BO15327 924 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 RSL1D1O76021 490 aaKnown RBP18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 GPIP06744 558 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 MTHFD1P11586 935 aaKnown RBP18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 KCNA5P22460 613 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 TCEA1P23193 301 aaKnown RBP18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 ATP5F1P24539 256 aaPredicted RBP18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 SHMT2P34897 504 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 TPTEP56180 551 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 INAQ16352 499 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 TBPL2Q6SJ96 375 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 AFAP1L2Q8N4X5 818 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 RNF139Q8WU17 664 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 MRPL57Q9BQC6 102 aaKnown RBP18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 FUNDC2Q9BWH2 189 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 TRIM8Q9BZR9 551 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 ANKMY1Q9P2S6 941 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 WARS2Q9UGM6 360 aaKnown RBP18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 FZD10Q9ULW2 581 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 MAGEB16A2A368 324 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 H0Y858 1186 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 FXYD1O00168 92 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 ACKR2O00590 384 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 MSI1O43347 362 aaKnown RBP18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 MT-ND1P03886 318 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 UGT2B4P06133 528 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 ALDOCP09972 364 aaKnown RBP18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 STMN1P16949 149 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 TMEM132BQ14DG7 1078 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 IER5Q5VY09 327 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 CRTC3Q6UUV7 619 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 SLC16A12Q6ZSM3 486 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 ACOT1Q86TX2 421 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 SPNS2Q8IVW8 549 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 DENND6AQ8IWF6 608 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 TTC30BQ8N4P2 665 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 HEXDCQ8WVB3 486 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 HOPXQ9BPY8 73 aaPredicted RBP18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 MLPHQ9BV36 600 aaPredicted RBP18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 ATP13A3Q9H7F0 1226 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 TRPV5Q9NQA5 729 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 TLR9Q9NR96 1032 aa18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 INTS10Q9NVR2 710 aaKnown RBP18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 RCOR3Q9P2K3 495 aaPredicted RBP18.68■□□□□ 0.58
ECHDC1-214ENST00000474289 A0A0J9YYE9 177 aa18.67■□□□□ 0.58
ECHDC1-214ENST00000474289 EIF2S1P05198 315 aaKnown RBP18.67■□□□□ 0.58
ECHDC1-214ENST00000474289 GJB1P08034 283 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms