RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 CPP00450 1065 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 CAPNS1P04632 268 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 CKMT1AP12532 417 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 CCNB1P14635 433 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 NFKBIAP25963 317 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 MAGEA1P43355 309 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 ZNF75DP51815 510 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 DAB2P98082 770 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 PPARDQ03181 441 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 GBE1Q04446 702 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 ITKQ08881 620 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 SLC10A2Q12908 348 aaPredicted RBP11.23□□□□□ -0.61
CKS1B-206ENST00000474215 TRAF2Q12933 501 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 FAXCQ5TGI0 409 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 MACC1Q6ZN28 852 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 VSIG1Q86XK7 387 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 MARCH9Q86YJ5 346 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 RHOT1Q8IXI2 618 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 CCDC170Q8IYT3 715 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 PHACTR4Q8IZ21 702 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 FAM181AQ8N9Y4 354 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 CCNYQ8ND76 341 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 LMX1AQ8TE12 382 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 SCRN2Q96FV2 425 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 MRFAP1L1Q96HT8 127 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 APOLD1Q96LR9 279 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 TBATAQ96M53 351 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 SEMA3CQ99985 751 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 ANP32EQ9BTT0 268 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 MAK16Q9BXY0 300 aaKnown RBP11.23□□□□□ -0.61
CKS1B-206ENST00000474215 SLC13A1Q9BZW2 595 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 POLR1EQ9GZS1 481 aaKnown RBP11.23□□□□□ -0.61
CKS1B-206ENST00000474215 HAUS2Q9NVX0 235 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 RBM22Q9NW64 420 aaKnown RBP eCLIP11.23□□□□□ -0.61
CKS1B-206ENST00000474215 DTLQ9NZJ0 730 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 SPASTQ9UBP0 616 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 B4GALT6Q9UBX8 382 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 APOBEC3BQ9UH17 382 aaKnown RBP11.23□□□□□ -0.61
CKS1B-206ENST00000474215 AMACRQ9UHK6 382 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 ZMIZ1Q9ULJ6 1067 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 PNMA8BQ9ULN7 279 aaPredicted RBP11.23□□□□□ -0.61
CKS1B-206ENST00000474215 PHTF1Q9UMS5 762 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 OR1A2Q9Y585 309 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 ZZEF1O43149 2961 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 TRABD2BA6NFA1 517 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 TPP1O14773 563 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 GCATO75600 419 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 PGLSO95336 258 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 JUPP14923 745 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 GM2AP17900 193 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 COMTP21964 271 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 HTR1BP28222 390 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 VIPR1P32241 457 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 HNF1BP35680 557 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 NOP2P46087 812 aaKnown RBP11.22□□□□□ -0.61
CKS1B-206ENST00000474215 BLKP51451 505 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 DUSP3P51452 185 aaPredicted RBP11.22□□□□□ -0.61
CKS1B-206ENST00000474215 HADHBP55084 474 aaKnown RBP11.22□□□□□ -0.61
CKS1B-206ENST00000474215 E2F1Q01094 437 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 MTM1Q13496 603 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 CAMK2BQ13554 666 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 NFATC4Q14934 902 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 ACOX1Q15067 660 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 SPA17Q15506 151 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 DEFB133Q30KQ1 61 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 ODF2Q5BJF6 829 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 PRRT3Q5FWE3 981 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 ARMC12Q5T9G4 340 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 ZCCHC8Q6NZY4 707 aaKnown RBP11.22□□□□□ -0.61
CKS1B-206ENST00000474215 RBFAQ8N0V3 343 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 CBARPQ8N350 705 aaPredicted RBP11.22□□□□□ -0.61
CKS1B-206ENST00000474215 PLA2G15Q8NCC3 412 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 ATL2Q8NHH9 583 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 TPCN2Q8NHX9 752 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 ZCCHC14Q8WYQ9 949 aaKnown RBP11.22□□□□□ -0.61
CKS1B-206ENST00000474215 HDAC11Q96DB2 347 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 COQ10AQ96MF6 247 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 ZNF830Q96NB3 372 aaPredicted RBP11.22□□□□□ -0.61
CKS1B-206ENST00000474215 PANX2Q96RD6 677 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 IL12RB2Q99665 862 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 TCEAL2Q9H3H9 227 aaPredicted RBP11.22□□□□□ -0.61
CKS1B-206ENST00000474215 USP29Q9HBJ7 922 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 EVA1BQ9NVM1 165 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 DDX56Q9NY93 547 aaKnown RBP11.22□□□□□ -0.61
CKS1B-206ENST00000474215 NCKIPSDQ9NZQ3 722 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 SALL4Q9UJQ4 1053 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 PPIL1Q9Y3C6 166 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 PCDHA13Q9Y5I0 950 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 HEY1Q9Y5J3 304 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 RAI2Q9Y5P3 530 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 USP24Q9UPU5 2620 aa11.22□□□□□ -0.61
CKS1B-206ENST00000474215 MAP1BP46821 2468 aaKnown RBP11.21□□□□□ -0.61
CKS1B-206ENST00000474215 DMXL2Q8TDJ6 3036 aa11.21□□□□□ -0.61
CKS1B-206ENST00000474215 LMO7DNF2Z398 122 aa11.21□□□□□ -0.61
CKS1B-206ENST00000474215 YY2O15391 372 aa11.21□□□□□ -0.61
CKS1B-206ENST00000474215 SPOPO43791 374 aa11.21□□□□□ -0.61
CKS1B-206ENST00000474215 HEXIM1O94992 359 aaKnown RBP11.21□□□□□ -0.61
CKS1B-206ENST00000474215 RASGRP1O95267 797 aa11.21□□□□□ -0.61
CKS1B-206ENST00000474215 JCHAINP01591 159 aa11.21□□□□□ -0.61
CKS1B-206ENST00000474215 KRT1P04264 644 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 181.6 ms