RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 GKP32189 559 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 ABL2P42684 1182 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 IL12RB1P42701 662 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 WASP42768 502 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 PSMD8P48556 350 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 SUOXP51687 545 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 ZP2Q05996 745 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 MGAT5Q09328 741 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 ELP6Q0PNE2 266 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 TAF1AQ15573 450 aaPredicted RBP10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 TTC31Q49AM3 519 aaPredicted RBP10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 ANKRD20A4Q4UJ75 823 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 TMEM196Q5HYL7 178 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 ZNF776Q68DI1 518 aaPredicted RBP10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 NAIF1Q69YI7 327 aaPredicted RBP10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 TTC7BQ86TV6 843 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 KCNMB4Q86W47 210 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 RIBC1Q8N443 379 aaPredicted RBP10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 CHST14Q8NCH0 376 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 TMIEQ8NEW7 156 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 OR6P1Q8NGX9 317 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 PIP4K2CQ8TBX8 421 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 HCAR2Q8TDS4 363 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 FBF1Q8TES7 1133 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 STYXQ8WUJ0 223 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 PTPRN2Q92932 1015 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 PEX13Q92968 403 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 PBXIP1Q96AQ6 731 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 MRRFQ96E11 262 aaKnown RBP10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 CERS2Q96G23 380 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 ZIM3Q96PE6 472 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 TRIB3Q96RU7 358 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 TTC1Q99614 292 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 FUT8Q9BYC5 575 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 TXLNGYQ9BZA5 131 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 ROPN1BQ9BZX4 212 aaPredicted RBP10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 ROPN1Q9HAT0 212 aaPredicted RBP10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 MAGEE1Q9HCI5 957 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 ARHGEF3Q9NR81 526 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 CHRAC1Q9NRG0 131 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 ZNF711Q9Y462 761 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 CDH23Q9H251 3354 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 MUC22E2RYF6 1773 aaPredicted RBP10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 COL4A2P08572 1712 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 A0A0J9YYE9 177 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 TCRBV9S1A1TA0A576 114 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 UPK3BL1B0FP48 263 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 UPK3BL2E5RIL1 263 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 HTRA2O43464 458 aaPredicted RBP10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 ATG13O75143 517 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 RNF40O75150 1001 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 CDH16O75309 829 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 PAPSS2O95340 614 aaPredicted RBP10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 TRBC1P01850 177 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 PDHA1P08559 390 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 PIRTP0C851 137 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 ZNF30P17039 623 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 PRKCHP24723 683 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 ITGB7P26010 798 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 PPARGP37231 505 aaPredicted RBP10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 NEK3P51956 506 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 ILF2Q12905 390 aaKnown RBP10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 UBXN2BQ14CS0 331 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 QPCTQ16769 361 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 UGP2Q16851 508 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 POM121L1PQ3SYA9 428 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 AARS2Q5JTZ9 985 aaKnown RBP10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 TSTD2Q5T7W7 516 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 ZDHHC20Q5W0Z9 365 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 DENND5AQ6IQ26 1287 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 ZNF449Q6P9G9 518 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 SDCCAG8Q86SQ7 713 aaPredicted RBP10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 LRRC6Q86X45 466 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 UBALD2Q8IYN6 164 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 PPM1NQ8N819 430 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 ATXN2LQ8WWM7 1075 aaKnown RBP10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 OMDQ99983 421 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 KIFC1Q9BW19 673 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 TMEM245Q9H330 911 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 ACSS3Q9H6R3 686 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 ZFYVE1Q9HBF4 777 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 POLMQ9NP87 494 aaPredicted RBP10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 MED4Q9NPJ6 270 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 PRDM6Q9NQX0 595 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 RAD18Q9NS91 495 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 PKD2L2Q9NZM6 624 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 PSMC3IPQ9P2W1 217 aaPredicted RBP10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 DKK3Q9UBP4 350 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 SLC24A2Q9UI40 661 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 NCKAP1Q9Y2A7 1128 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 FNDC3AQ9Y2H6 1198 aaKnown RBP10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 SLC30A1Q9Y6M5 507 aa10.31□□□□□ -0.76
PRPF38A-202ENST00000474048 IQANK1A0A1B0GTG1 560 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 C16orf96A6NNT2 1141 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 GOLGA8KD6RF30 607 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 K7EQS6 105 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 TRAFD1O14545 582 aaPredicted RBP10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 ZNF821O75541 412 aaPredicted RBP10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 RPP40O75818 363 aaKnown RBP10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 KRT37O76014 449 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms