RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 HDAC8Q9BY41 377 aa9.17□□□□□ -0.94
SMC4-214ENST00000472991 BTBD1Q9H0C5 482 aa9.17□□□□□ -0.94
SMC4-214ENST00000472991 DUSP15Q9H1R2 295 aaPredicted RBP9.17□□□□□ -0.94
SMC4-214ENST00000472991 EPC1Q9H2F5 836 aa9.17□□□□□ -0.94
SMC4-214ENST00000472991 SUV39H2Q9H5I1 410 aa9.17□□□□□ -0.94
SMC4-214ENST00000472991 SGK2Q9HBY8 427 aa9.17□□□□□ -0.94
SMC4-214ENST00000472991 NOD2Q9HC29 1040 aa9.17□□□□□ -0.94
SMC4-214ENST00000472991 SMARCAL1Q9NZC9 954 aa9.17□□□□□ -0.94
SMC4-214ENST00000472991 DNPEPQ9ULA0 475 aa9.17□□□□□ -0.94
SMC4-214ENST00000472991 ATXN7L1Q9ULK2 861 aaPredicted RBP9.17□□□□□ -0.94
SMC4-214ENST00000472991 SNX12Q9UMY4 172 aa9.17□□□□□ -0.94
SMC4-214ENST00000472991 SMG5Q9UPR3 1016 aaKnown RBP9.17□□□□□ -0.94
SMC4-214ENST00000472991 ATP8A1Q9Y2Q0 1164 aa9.17□□□□□ -0.94
SMC4-214ENST00000472991 PCDHGC4Q9Y5F7 938 aa9.17□□□□□ -0.94
SMC4-214ENST00000472991 OTOGLQ3ZCN5 2332 aa9.17□□□□□ -0.94
SMC4-214ENST00000472991 FRYLO94915 3013 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 TSPAN11A1L157 253 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 BCLAF3A2AJT9 711 aaKnown RBP9.16□□□□□ -0.94
SMC4-214ENST00000472991 CTAGE9A4FU28 777 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 UPK3BL1B0FP48 263 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 UPK3BL2E5RIL1 263 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 F5H423 210 aaPredicted RBP9.16□□□□□ -0.94
SMC4-214ENST00000472991 PGRMC1O00264 195 aaKnown RBP9.16□□□□□ -0.94
SMC4-214ENST00000472991 ZNF185O15231 689 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 SLC7A4O43246 635 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 PLRG1O43660 514 aaKnown RBP9.16□□□□□ -0.94
SMC4-214ENST00000472991 LIASO43766 372 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 SOCS5O75159 536 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 PRKCGP05129 697 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 MMP2P08253 660 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 NFKB1P19838 968 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 CD68P34810 354 aaPredicted RBP9.16□□□□□ -0.94
SMC4-214ENST00000472991 CD86P42081 329 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 DHPSP49366 369 aaPredicted RBP9.16□□□□□ -0.94
SMC4-214ENST00000472991 TAS2R38P59533 333 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 SNX1Q13596 522 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 IHHQ14623 411 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 SUZ12Q15022 739 aaKnown RBP9.16□□□□□ -0.94
SMC4-214ENST00000472991 ELF2Q15723 593 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 CFAP58Q5T655 872 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 FBXL19Q6PCT2 694 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 LPCAT2Q7L5N7 544 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 SLC41A1Q8IVJ1 513 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 TMEFF1Q8IYR6 380 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 ARRDC2Q8TBH0 407 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 PDCD6IPQ8WUM4 868 aaKnown RBP9.16□□□□□ -0.94
SMC4-214ENST00000472991 MAIP1Q8WWC4 291 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 ECHDC3Q96DC8 303 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 ABHD17AQ96GS6 310 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 TEKT5Q96M29 485 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 C16orf45Q96MC5 204 aaPredicted RBP9.16□□□□□ -0.94
SMC4-214ENST00000472991 HSPA12BQ96MM6 686 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 ZNF641Q96N77 438 aaPredicted RBP9.16□□□□□ -0.94
SMC4-214ENST00000472991 RBM15Q96T37 977 aaKnown RBP eCLIP9.16□□□□□ -0.945e-67■■■■■ 212.6
SMC4-214ENST00000472991 VAT1Q99536 393 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 FERMT1Q9BQL6 677 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 SLC25A51Q9H1U9 297 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 C6orf106Q9H6K1 298 aaPredicted RBP9.16□□□□□ -0.94
SMC4-214ENST00000472991 GLOD4Q9HC38 313 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 DNAAF2Q9NVR5 837 aaKnown RBP9.16□□□□□ -0.94
SMC4-214ENST00000472991 DKK3Q9UBP4 350 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 GGT7Q9UJ14 662 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 RAB23Q9ULC3 237 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 ITM2BQ9Y287 266 aa9.16□□□□□ -0.94
SMC4-214ENST00000472991 PCDH15Q96QU1 1955 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 LRP4O75096 1905 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 GPR179Q6PRD1 2367 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 ATXN2Q99700 1313 aaKnown RBP9.15□□□□□ -0.94
SMC4-214ENST00000472991 LOC100996750A0A140TA64 210 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 LRRC72A6NJI9 287 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 MEI4A8MW99 385 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 TRAFD1O14545 582 aaPredicted RBP9.15□□□□□ -0.94
SMC4-214ENST00000472991 HTRA2O43464 458 aaPredicted RBP9.15□□□□□ -0.94
SMC4-214ENST00000472991 STK10O94804 968 aaKnown RBP9.15□□□□□ -0.94
SMC4-214ENST00000472991 RHOBTB1O94844 696 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 MT-CYBP00156 380 aaPredicted RBP9.15□□□□□ -0.94
SMC4-214ENST00000472991 CPP00450 1065 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 SERPINF2P08697 491 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 TCP1P17987 556 aaKnown RBP9.15□□□□□ -0.94
SMC4-214ENST00000472991 XPAP23025 273 aaPredicted RBP9.15□□□□□ -0.94
SMC4-214ENST00000472991 CES1P23141 567 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 PTGER3P43115 390 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 ETF1P62495 437 aaKnown RBP9.15□□□□□ -0.94
SMC4-214ENST00000472991 PPP2CBP62714 309 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 PPP2CAP67775 309 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 FOXK2Q01167 660 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 CCDC15Q0P6D6 951 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 OASLQ15646 514 aaKnown RBP9.15□□□□□ -0.94
SMC4-214ENST00000472991 ANKRD20A2Q5SQ80 823 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 ANKRD20A1Q5TYW2 823 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 ANKRD20A3Q5VUR7 823 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 PAPD7Q5XG87 772 aaKnown RBP9.15□□□□□ -0.94
SMC4-214ENST00000472991 BRAT1Q6PJG6 821 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 SYT10Q6XYQ8 523 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 C1orf229Q6ZS94 237 aaPredicted RBP9.15□□□□□ -0.94
SMC4-214ENST00000472991 PID1Q7Z2X4 250 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 FAM71DQ8N9W8 422 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 SUMF1Q8NBK3 374 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 OR2T34Q8NGX1 318 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms