RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 SLC11A1P49279 550 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 GPR15P49685 360 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 RPL14P50914 215 aaKnown RBP7.68□□□□□ -1.18
CCDC171-205ENST00000472806 CDH4P55283 916 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 NAA20P61599 178 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 AP2B1P63010 937 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 SATB1Q01826 763 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 KDSRQ06136 332 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 MSLNQ13421 630 aaPredicted RBP7.68□□□□□ -1.18
CCDC171-205ENST00000472806 SERINC3Q13530 473 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 CNGA3Q16281 694 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 PCSK7Q16549 785 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 USP41Q3LFD5 358 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 C5orf22Q49AR2 442 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 SH2D4BQ5SQS7 431 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 ZNF470Q6ECI4 717 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 FAM45BPQ6NSW5 357 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 MRNIPQ6NTE8 343 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 TMEM214Q6NUQ4 689 aaKnown RBP7.68□□□□□ -1.18
CCDC171-205ENST00000472806 EPGNQ6UW88 154 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 TFAP2DQ7Z6R9 452 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 SDCCAG8Q86SQ7 713 aaPredicted RBP7.68□□□□□ -1.18
CCDC171-205ENST00000472806 MIB1Q86YT6 1006 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 SLC41A1Q8IVJ1 513 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 MFN1Q8IWA4 741 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.68□□□□□ -1.18
CCDC171-205ENST00000472806 PLD6Q8N2A8 252 aaKnown RBP7.68□□□□□ -1.18
CCDC171-205ENST00000472806 PHTF2Q8N3S3 785 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 GPATCH11Q8N954 259 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 ATAD1Q8NBU5 361 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 DBF4BQ8NFT6 615 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 FAM45AQ8TCE6 357 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 EDARADDQ8WWZ3 215 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 JADE3Q92613 823 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 TADA1Q96BN2 335 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 CNDP1Q96KN2 507 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 ASB2Q96Q27 587 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 TRMOQ9BU70 441 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 C1QTNF1Q9BXJ1 281 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 C20orf27Q9GZN8 174 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 DENND2DQ9H6A0 471 aaPredicted RBP7.68□□□□□ -1.18
CCDC171-205ENST00000472806 NOL6Q9H6R4 1146 aaKnown RBP7.68□□□□□ -1.18
CCDC171-205ENST00000472806 CAB39LQ9H9S4 337 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 POPDC3Q9HBV1 291 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 PNPOQ9NVS9 261 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 MARCH5Q9NX47 278 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 HACD3Q9P035 362 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 ZNF212Q9UDV6 495 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 SEPT3Q9UH03 358 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 MCM8Q9UJA3 840 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 NUDT5Q9UKK9 219 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 ARHGAP26Q9UNA1 814 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 CDYLQ9Y232 598 aa7.68□□□□□ -1.18
CCDC171-205ENST00000472806 FNDC1Q4ZHG4 1894 aaPredicted RBP7.68□□□□□ -1.18
CCDC171-205ENST00000472806 LOC285095A0A1B0GVY8 99 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 CCDC189A1A4V9 331 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 C2orf71A6NGG8 1288 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 TBKBP1A7MCY6 615 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 PRR5-ARHGAP8B1AHC4 643 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 MATN2O00339 956 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 ACSL4O60488 711 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 B4GALT3O60512 393 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 FKTNO75072 461 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 CLDN11O75508 207 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 PSMG1O95456 288 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 CRTAMO95727 393 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 LATS1O95835 1130 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 GLP2RO95838 553 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 TOP3BO95985 862 aaKnown RBP7.67□□□□□ -1.18
CCDC171-205ENST00000472806 FURINP09958 794 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 LTA4HP09960 611 aaKnown RBP7.67□□□□□ -1.18
CCDC171-205ENST00000472806 OGNP20774 298 aaKnown RBP7.67□□□□□ -1.18
CCDC171-205ENST00000472806 MAP2K3P46734 347 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 ALDH7A1P49419 539 aaKnown RBP7.67□□□□□ -1.18
CCDC171-205ENST00000472806 OXCT1P55809 520 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 IRX1P78414 480 aaPredicted RBP7.67□□□□□ -1.18
CCDC171-205ENST00000472806 ARHGAP8P85298 464 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 MPP1Q00013 466 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 IRF9Q00978 393 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 SLC34A1Q06495 639 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 NSUN2Q08J23 767 aaKnown RBP eCLIP7.67□□□□□ -1.18
CCDC171-205ENST00000472806 SLC10A7Q0GE19 358 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 GALNT1Q10472 559 aaPredicted RBP7.67□□□□□ -1.18
CCDC171-205ENST00000472806 TUBB3Q13509 450 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 VEPH1Q14D04 833 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 HERC3Q15034 1050 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 ACAP2Q15057 778 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 MAPRE2Q15555 327 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 TAF12Q16514 161 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 ALFQ53S48 1182 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 HECTD3Q5T447 861 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 SDHAF4Q5VUM1 108 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 CES4AQ5XG92 561 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 TPGS2Q68CL5 300 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 ALG1LQ6GMV1 187 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 SLC8B1Q6J4K2 584 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 KIAA1841Q6NSI8 718 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 AAGABQ6PD74 315 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 C16orf89Q6UX73 402 aa7.67□□□□□ -1.18
CCDC171-205ENST00000472806 LINC00114Q6XXX2 140 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms