RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 GOLGA8MH3BSY2 632 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 MAP3K13O43283 966 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 AP1G1O43747 822 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 PCDH8O95206 1070 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 CRTAMO95727 393 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 TBC1D3HP0C7X1 549 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 C7P10643 843 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 MCM3P25205 808 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 VIPR1P32241 457 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 DRD3P35462 400 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 PXNP49023 591 aaPredicted RBP16.93■□□□□ 0.3
CCM2-205ENST00000472223 PLTPP55058 493 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 ARL4CP56559 192 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 CUL1Q13616 776 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 KCTD19Q17RG1 926 aaPredicted RBP16.93■□□□□ 0.3
CCM2-205ENST00000472223 DNAJC21Q5F1R6 531 aaKnown RBP16.93■□□□□ 0.3
CCM2-205ENST00000472223 TBC1D3GQ6DHY5 549 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 TBC1D3CQ6IPX1 549 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 HIBCHQ6NVY1 386 aaPredicted RBP16.93■□□□□ 0.3
CCM2-205ENST00000472223 TBC1D3Q8IZP1 549 aaPredicted RBP16.93■□□□□ 0.3
CCM2-205ENST00000472223 BLOC1S5Q8TDH9 187 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 NSMCE3Q96MG7 304 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 TRIB3Q96RU7 358 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 GPR63Q9BZJ6 419 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 PCDH12Q9NPG4 1184 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 PRMT8Q9NR22 394 aaPredicted RBP16.93■□□□□ 0.3
CCM2-205ENST00000472223 USP36Q9P275 1121 aaKnown RBP16.93■□□□□ 0.3
CCM2-205ENST00000472223 CYP8B1Q9UNU6 501 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 PPIL1Q9Y3C6 166 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 CAPN8A6NHC0 703 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 FAM47DPA6NHR8 397 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 K7ESF4 209 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 PLK4O00444 970 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 PRLP01236 227 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 ZNF30P17039 623 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 IVDP26440 423 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 CD6P30203 668 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 HNF1BP35680 557 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 ABL2P42684 1182 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 SESN2P58004 480 aaPredicted RBP16.92■□□□□ 0.3
CCM2-205ENST00000472223 IHHQ14623 411 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 PIP5KL1Q5T9C9 394 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 NEK5Q6P3R8 708 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 CASC4Q6P4E1 433 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 SLC36A4Q6YBV0 504 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 GLT6D1Q7Z4J2 308 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 C11orf74Q86VG3 221 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 PPHLN1Q8NEY8 458 aaKnown RBP16.92■□□□□ 0.3
CCM2-205ENST00000472223 RUBCNQ92622 972 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 HINFPQ9BQA5 517 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 FOXP3Q9BZS1 431 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 IL22Q9GZX6 179 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 PREBQ9HCU5 417 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 CASS4Q9NQ75 786 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 SAMD15Q9P1V8 674 aa16.92■□□□□ 0.3
CCM2-205ENST00000472223 C1orf232A0A0U1RR37 186 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 TCRBV7S3A2A0A539 114 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 MAGEB16A2A368 324 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 SDR42E2A6NKP2 422 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 A8MX80 341 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 H0Y858 1186 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 PLRG1O43660 514 aaKnown RBP16.91■□□□□ 0.3
CCM2-205ENST00000472223 LZTS3O60299 673 aaPredicted RBP16.91■□□□□ 0.3
CCM2-205ENST00000472223 IGLV3-19P01714 112 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 TUBBP07437 444 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 ALPIP09923 528 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 ATXN1LP0C7T5 689 aaKnown RBP16.91■□□□□ 0.3
CCM2-205ENST00000472223 ELFN1P0C7U0 828 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 CHRNA4P43681 627 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 METAP1P53582 386 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 HIF1AQ16665 826 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 LRRC73Q5JTD7 316 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 AGBL4Q5VU57 503 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 ANKRD22Q5VYY1 191 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 KIAA1161Q6NSJ0 714 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 CENPUQ71F23 418 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 DPPA4Q7L190 304 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 NLRP9Q7RTR0 991 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 LONP2Q86WA8 852 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 ZSWIM9Q86XI8 627 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 GPR161Q8N6U8 529 aaKnown RBP16.91■□□□□ 0.3
CCM2-205ENST00000472223 OR2T34Q8NGX1 318 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 BRSK1Q8TDC3 778 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 ART4Q93070 314 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 LYSMD1Q96S90 227 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 C1QTNF7Q9BXJ2 289 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 ZFYVE1Q9HBF4 777 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 KCTD5Q9NXV2 234 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 B4GALT6Q9UBX8 382 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 DMGDHQ9UI17 866 aaKnown RBP16.91■□□□□ 0.3
CCM2-205ENST00000472223 PKP3Q9Y446 797 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 FADS3Q9Y5Q0 445 aa16.91■□□□□ 0.3
CCM2-205ENST00000472223 ESYT3A0FGR9 886 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 HEATR9A2RTY3 570 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 PRR23AA6NEV1 266 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 PPFIA2O75334 1257 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 TMEM63AO94886 807 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 SEMA4FO95754 770 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 PRKCGP05129 697 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 TPH1P17752 444 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms