RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 KLQ9UEF7 1012 aa22.67■■□□□ 1.22
C9orf3-213ENST00000471978 PADI4Q9UM07 663 aa22.67■■□□□ 1.22
C9orf3-213ENST00000471978 BZW2Q9Y6E2 419 aaKnown RBP22.67■■□□□ 1.22
C9orf3-213ENST00000471978 FASNP49327 2511 aaKnown RBP22.66■■□□□ 1.22
C9orf3-213ENST00000471978 ALPIP09923 528 aa22.66■■□□□ 1.22
C9orf3-213ENST00000471978 AMPD1P23109 780 aa22.66■■□□□ 1.22
C9orf3-213ENST00000471978 AP1S1P61966 158 aa22.66■■□□□ 1.22
C9orf3-213ENST00000471978 TPM4P67936 248 aa22.66■■□□□ 1.22
C9orf3-213ENST00000471978 SLC10A7Q0GE19 358 aa22.66■■□□□ 1.22
C9orf3-213ENST00000471978 RALGDSQ12967 914 aa22.66■■□□□ 1.22
C9orf3-213ENST00000471978 HGSNATQ68CP4 663 aa22.66■■□□□ 1.22
C9orf3-213ENST00000471978 RBM44Q6ZP01 1051 aaKnown RBP22.66■■□□□ 1.22
C9orf3-213ENST00000471978 PLA2G15Q8NCC3 412 aa22.66■■□□□ 1.22
C9orf3-213ENST00000471978 NSMCE3Q96MG7 304 aa22.66■■□□□ 1.22
C9orf3-213ENST00000471978 WDR92Q96MX6 357 aa22.66■■□□□ 1.22
C9orf3-213ENST00000471978 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.66■■□□□ 1.22
C9orf3-213ENST00000471978 ETNK2Q9NVF9 386 aa22.66■■□□□ 1.22
C9orf3-213ENST00000471978 GULP1Q9UBP9 304 aa22.66■■□□□ 1.22
C9orf3-213ENST00000471978 RAI2Q9Y5P3 530 aa22.66■■□□□ 1.22
C9orf3-213ENST00000471978 A0A1W2PQJ5 194 aa22.65■■□□□ 1.22
C9orf3-213ENST00000471978 TTC24A2A3L6 582 aaPredicted RBP22.65■■□□□ 1.22
C9orf3-213ENST00000471978 TRAFD1O14545 582 aaPredicted RBP22.65■■□□□ 1.22
C9orf3-213ENST00000471978 DXOO77932 396 aaKnown RBP22.65■■□□□ 1.22
C9orf3-213ENST00000471978 RECQL5O94762 991 aaPredicted RBP22.65■■□□□ 1.22
C9orf3-213ENST00000471978 ELFN1P0C7U0 828 aa22.65■■□□□ 1.22
C9orf3-213ENST00000471978 FANCCQ00597 558 aa22.65■■□□□ 1.22
C9orf3-213ENST00000471978 PIGHQ14442 188 aaPredicted RBP22.65■■□□□ 1.22
C9orf3-213ENST00000471978 ZNF235Q14590 738 aa22.65■■□□□ 1.22
C9orf3-213ENST00000471978 LVRNQ6Q4G3 990 aa22.65■■□□□ 1.22
C9orf3-213ENST00000471978 TMCO3Q6UWJ1 677 aa22.65■■□□□ 1.22
C9orf3-213ENST00000471978 LIPIQ6XZB0 460 aa22.65■■□□□ 1.22
C9orf3-213ENST00000471978 NYAP1Q6ZVC0 841 aa22.65■■□□□ 1.22
C9orf3-213ENST00000471978 DPPA4Q7L190 304 aa22.65■■□□□ 1.22
C9orf3-213ENST00000471978 POLNQ7Z5Q5 900 aa22.65■■□□□ 1.22
C9orf3-213ENST00000471978 PCDH19Q8TAB3 1148 aa22.65■■□□□ 1.22
C9orf3-213ENST00000471978 SYN2Q92777 582 aaPredicted RBP22.65■■□□□ 1.22
C9orf3-213ENST00000471978 GRAMD1AQ96CP6 724 aa22.65■■□□□ 1.22
C9orf3-213ENST00000471978 ATXN7L3BQ96GX2 97 aa22.65■■□□□ 1.22
C9orf3-213ENST00000471978 CCDC3Q9BQI4 270 aa22.65■■□□□ 1.22
C9orf3-213ENST00000471978 PRORYQ9H606 182 aa22.65■■□□□ 1.22
C9orf3-213ENST00000471978 CBX8Q9HC52 389 aa22.65■■□□□ 1.22
C9orf3-213ENST00000471978 SIRPGQ9P1W8 387 aa22.65■■□□□ 1.22
C9orf3-213ENST00000471978 ANKRD36A6QL64 1941 aa22.65■■□□□ 1.22
C9orf3-213ENST00000471978 KALRNO60229 2985 aa22.64■■□□□ 1.22
C9orf3-213ENST00000471978 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.64■■□□□ 1.21
C9orf3-213ENST00000471978 SYCE3A1L190 88 aa22.64■■□□□ 1.21
C9orf3-213ENST00000471978 A8MX80 341 aa22.64■■□□□ 1.21
C9orf3-213ENST00000471978 TCEA3O75764 348 aa22.64■■□□□ 1.21
C9orf3-213ENST00000471978 RARAP10276 462 aa22.64■■□□□ 1.21
C9orf3-213ENST00000471978 PCBP4P57723 403 aaKnown RBP22.64■■□□□ 1.21
C9orf3-213ENST00000471978 LUZP1Q86V48 1076 aa22.64■■□□□ 1.21
C9orf3-213ENST00000471978 GKN2Q86XP6 184 aa22.64■■□□□ 1.21
C9orf3-213ENST00000471978 SPACA3Q8IXA5 215 aa22.64■■□□□ 1.21
C9orf3-213ENST00000471978 SDR16C5Q8N3Y7 309 aa22.64■■□□□ 1.21
C9orf3-213ENST00000471978 ARL10Q8N8L6 244 aa22.64■■□□□ 1.21
C9orf3-213ENST00000471978 ZNF248Q8NDW4 579 aa22.64■■□□□ 1.21
C9orf3-213ENST00000471978 WDR48Q8TAF3 677 aa22.64■■□□□ 1.21
C9orf3-213ENST00000471978 CSPG4P5Q96PW8 444 aa22.64■■□□□ 1.21
C9orf3-213ENST00000471978 LGMNQ99538 433 aa22.64■■□□□ 1.21
C9orf3-213ENST00000471978 THAP2Q9H0W7 228 aa22.64■■□□□ 1.21
C9orf3-213ENST00000471978 SATB2Q9UPW6 733 aa22.64■■□□□ 1.21
C9orf3-213ENST00000471978 PTPRQQ9UMZ3 2332 aa22.64■■□□□ 1.21
C9orf3-213ENST00000471978 CACNB4O00305 520 aaPredicted RBP22.63■■□□□ 1.21
C9orf3-213ENST00000471978 CASC3O15234 703 aaKnown RBP22.63■■□□□ 1.21
C9orf3-213ENST00000471978 PEX11BO96011 259 aa22.63■■□□□ 1.21
C9orf3-213ENST00000471978 TNFP01375 233 aa22.63■■□□□ 1.21
C9orf3-213ENST00000471978 PBX1P40424 430 aa22.63■■□□□ 1.21
C9orf3-213ENST00000471978 ERVPABLB-1P60509 514 aa22.63■■□□□ 1.21
C9orf3-213ENST00000471978 TLE3Q04726 772 aa22.63■■□□□ 1.21
C9orf3-213ENST00000471978 C3orf38Q5JPI3 329 aa22.63■■□□□ 1.21
C9orf3-213ENST00000471978 TXNRD3NBQ6F5E7 133 aa22.63■■□□□ 1.21
C9orf3-213ENST00000471978 KYQ8NBH2 561 aa22.63■■□□□ 1.21
C9orf3-213ENST00000471978 CPLX3Q8WVH0 158 aa22.63■■□□□ 1.21
C9orf3-213ENST00000471978 FUBP1Q96AE4 644 aaKnown RBP22.63■■□□□ 1.21
C9orf3-213ENST00000471978 PDXPQ96GD0 296 aa22.63■■□□□ 1.21
C9orf3-213ENST00000471978 NAF1Q96HR8 494 aaKnown RBP22.63■■□□□ 1.21
C9orf3-213ENST00000471978 HIC2Q96JB3 615 aa22.63■■□□□ 1.21
C9orf3-213ENST00000471978 BTBD6Q96KE9 485 aa22.63■■□□□ 1.21
C9orf3-213ENST00000471978 FCRL3Q96P31 734 aaPredicted RBP22.63■■□□□ 1.21
C9orf3-213ENST00000471978 SYNDIG1Q9H7V2 258 aa22.63■■□□□ 1.21
C9orf3-213ENST00000471978 GPR34Q9UPC5 381 aa22.63■■□□□ 1.21
C9orf3-213ENST00000471978 PCDHGC4Q9Y5F7 938 aa22.63■■□□□ 1.21
C9orf3-213ENST00000471978 ENTPD2Q9Y5L3 495 aa22.63■■□□□ 1.21
C9orf3-213ENST00000471978 DGKBQ9Y6T7 804 aa22.63■■□□□ 1.21
C9orf3-213ENST00000471978 RP1P56715 2156 aa22.63■■□□□ 1.21
C9orf3-213ENST00000471978 COL27A1Q8IZC6 1860 aaPredicted RBP22.62■■□□□ 1.21
C9orf3-213ENST00000471978 EIF4E1BA6NMX2 242 aaKnown RBP22.62■■□□□ 1.21
C9orf3-213ENST00000471978 SERPING1P05155 500 aa22.62■■□□□ 1.21
C9orf3-213ENST00000471978 HSPA9P38646 679 aaKnown RBP22.62■■□□□ 1.21
C9orf3-213ENST00000471978 UBASH3AP57075 661 aa22.62■■□□□ 1.21
C9orf3-213ENST00000471978 KIAA1024LP59773 190 aa22.62■■□□□ 1.21
C9orf3-213ENST00000471978 ACOX1Q15067 660 aa22.62■■□□□ 1.21
C9orf3-213ENST00000471978 KCTD16Q68DU8 428 aa22.62■■□□□ 1.21
C9orf3-213ENST00000471978 NIPA2Q8N8Q9 360 aa22.62■■□□□ 1.21
C9orf3-213ENST00000471978 OR56A4Q8NGH8 313 aa22.62■■□□□ 1.21
C9orf3-213ENST00000471978 PDCD6IPQ8WUM4 868 aaKnown RBP22.62■■□□□ 1.21
C9orf3-213ENST00000471978 TEKT4Q8WW24 435 aa22.62■■□□□ 1.21
C9orf3-213ENST00000471978 NUDCD1Q96RS6 583 aa22.62■■□□□ 1.21
C9orf3-213ENST00000471978 UBL7Q96S82 380 aaPredicted RBP22.62■■□□□ 1.21
C9orf3-213ENST00000471978 RBM15Q96T37 977 aaKnown RBP eCLIP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms