RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 PDHA1P08559 390 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 FAM228BP0C875 321 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 CTPS1P17812 591 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 PRKCIP41743 596 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 ABCG1P45844 678 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 LSSP48449 732 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 ZNF165P49910 485 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 HK3P52790 923 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 THOP1P52888 689 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 GEMIN4P57678 1058 aaKnown RBP8.12□□□□□ -1.11
USP48-207ENST00000471752 SRP54P61011 504 aaKnown RBP8.12□□□□□ -1.11
USP48-207ENST00000471752 PPARDQ03181 441 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 KLHL30Q0D2K2 578 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 TRAF2Q12933 501 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 C3orf38Q5JPI3 329 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 DENND2CQ68D51 928 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 ZCCHC8Q6NZY4 707 aaKnown RBP8.12□□□□□ -1.11
USP48-207ENST00000471752 MACC1Q6ZN28 852 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 HSD11B1LQ7Z5J1 315 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 TSPAN33Q86UF1 283 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 NRROSQ86YC3 692 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 CACTIN-AS1Q8N1I8 211 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 CBARPQ8N350 705 aaPredicted RBP8.12□□□□□ -1.11
USP48-207ENST00000471752 DENND6BQ8NEG7 585 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 ANKRD20A12PQ8NF67 263 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 SNIP1Q8TAD8 396 aaKnown RBP8.12□□□□□ -1.11
USP48-207ENST00000471752 ECHDC3Q96DC8 303 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 VCPIP1Q96JH7 1222 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 AGAP2Q99490 1192 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 IL12RB2Q99665 862 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 NCAPGQ9BPX3 1015 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 CCDC3Q9BQI4 270 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 BPIFA3Q9BQP9 254 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 PACSIN1Q9BY11 444 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 TMEM168Q9H0V1 697 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 THAP2Q9H0W7 228 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 ABCG4Q9H172 646 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 ISCUQ9H1K1 167 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 RETREG1Q9H6L5 497 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 CATSPERBQ9H7T0 1116 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 SPATS2LQ9NUQ6 558 aaKnown RBP8.12□□□□□ -1.11
USP48-207ENST00000471752 SPASTQ9UBP0 616 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 B4GALT6Q9UBX8 382 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 SALL4Q9UJQ4 1053 aa8.12□□□□□ -1.11
USP48-207ENST00000471752 ATXN7L1Q9ULK2 861 aaPredicted RBP8.12□□□□□ -1.11
USP48-207ENST00000471752 PCYT1BQ9Y5K3 369 aaPredicted RBP8.12□□□□□ -1.11
USP48-207ENST00000471752 MYO18BQ8IUG5 2567 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 ANKRD62A6NC57 917 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 NEMP2A6NFY4 417 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 ARHGAP42A6NI28 874 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 PYCARD-AS1I3L0S3 204 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 NTN3O00634 580 aaPredicted RBP8.11□□□□□ -1.11
USP48-207ENST00000471752 PRPSAP2O60256 369 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 LZTS3O60299 673 aaPredicted RBP8.11□□□□□ -1.11
USP48-207ENST00000471752 NOBOXO60393 691 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 MAFKO60675 156 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 ANXA6P08133 673 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 ALPIP09923 528 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 ALPPL2P10696 532 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 CDK4P11802 303 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 GZMAP12544 262 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 CR2P20023 1033 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 LHCGRP22888 699 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 XPAP23025 273 aaPredicted RBP8.11□□□□□ -1.11
USP48-207ENST00000471752 ETV3P41162 512 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 CSNK1DP48730 415 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 ARSEP51690 589 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 TAS2R40P59535 323 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 YPEL5P62699 121 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 CXADRP78310 365 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 FANCCQ00597 558 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 RAD51Q06609 339 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 NFATC4Q14934 902 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 NR0B2Q15466 257 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 TGIF1Q15583 401 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 CNGA3Q16281 694 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 C6orf132Q5T0Z8 1188 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 ARHGAP40Q5TG30 622 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 B4GALNT4Q76KP1 1039 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 DPPA4Q7L190 304 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 SDR16C5Q8N3Y7 309 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 FNIP1Q8TF40 1166 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 PATE1Q8WXA2 126 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 CASKIN2Q8WXE0 1202 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 CCDC74AQ96AQ1 378 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 RNF25Q96BH1 459 aaPredicted RBP8.11□□□□□ -1.11
USP48-207ENST00000471752 COQ10AQ96MF6 247 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 SLC46A1Q96NT5 459 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 FCRL3Q96P31 734 aaPredicted RBP8.11□□□□□ -1.11
USP48-207ENST00000471752 CSPG4P5Q96PW8 444 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 EDEM3Q9BZQ6 932 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 SLC13A1Q9BZW2 595 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 SYNDIG1Q9H7V2 258 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 POLR1BQ9H9Y6 1135 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 PCDH18Q9HCL0 1135 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 TMEM51Q9NW97 253 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 CD84Q9UIB8 345 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 MYO6Q9UM54 1294 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 GPR34Q9UPC5 381 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 ATP8A1Q9Y2Q0 1164 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms