RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ITM2BQ9Y287 266 aa19.28■□□□□ 0.68
PSPC1-203ENST00000471658 PPIL1Q9Y3C6 166 aa19.28■□□□□ 0.68
PSPC1-203ENST00000471658 KCTD3Q9Y597 815 aa19.28■□□□□ 0.68
PSPC1-203ENST00000471658 MAD1L1Q9Y6D9 718 aa19.28■□□□□ 0.68
PSPC1-203ENST00000471658 TECTAO75443 2155 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 MUC3AQ02505 3323 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 A0A1W2PP55 124 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 TMEM221A6NGB7 291 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 NPIPB15A6NHN6 443 aaPredicted RBP19.27■□□□□ 0.68
PSPC1-203ENST00000471658 UPK3BL1B0FP48 263 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 UPK3BL2E5RIL1 263 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 M0R296 226 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 SPINT1O43278 529 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 ADH1BP00325 375 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 RPS9P46781 194 aaKnown RBP19.27■□□□□ 0.68
PSPC1-203ENST00000471658 SEPT6Q14141 434 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 DNAJC21Q5F1R6 531 aaKnown RBP19.27■□□□□ 0.68
PSPC1-203ENST00000471658 CASC4Q6P4E1 433 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 FBXL19Q6PCT2 694 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 CES3Q6UWW8 571 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 KIAA1324Q6UXG2 1013 aaKnown RBP19.27■□□□□ 0.68
PSPC1-203ENST00000471658 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.27■□□□□ 0.68
PSPC1-203ENST00000471658 MICALCLQ6ZW33 695 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 ERN2Q76MJ5 926 aaKnown RBP19.27■□□□□ 0.68
PSPC1-203ENST00000471658 HDDC3Q8N4P3 179 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 FBXO36Q8NEA4 188 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 HMGB4Q8WW32 186 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 SPOCK2Q92563 424 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 SCRN2Q96FV2 425 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 ZNF778Q96MU6 729 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 FOXP3Q9BZS1 431 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 FBRSQ9HAH7 460 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 DYRK4Q9NR20 520 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 CHRAC1Q9NRG0 131 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 DLGAP2Q9P1A6 1054 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 B4GALT6Q9UBX8 382 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 GGT7Q9UJ14 662 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 TEX264Q9Y6I9 313 aa19.27■□□□□ 0.68
PSPC1-203ENST00000471658 A0A1W2PQ67 120 aa19.26■□□□□ 0.67
PSPC1-203ENST00000471658 SLC4A1P02730 911 aa19.26■□□□□ 0.67
PSPC1-203ENST00000471658 DNTTP04053 509 aa19.26■□□□□ 0.67
PSPC1-203ENST00000471658 TUBBP07437 444 aa19.26■□□□□ 0.67
PSPC1-203ENST00000471658 C5AR1P21730 350 aa19.26■□□□□ 0.67
PSPC1-203ENST00000471658 MAGEA4P43358 317 aa19.26■□□□□ 0.67
PSPC1-203ENST00000471658 DGKEP52429 567 aa19.26■□□□□ 0.67
PSPC1-203ENST00000471658 POLR2LP62875 67 aaKnown RBP19.26■□□□□ 0.67
PSPC1-203ENST00000471658 FAM193AP78312 1265 aa19.26■□□□□ 0.67
PSPC1-203ENST00000471658 CBLBQ13191 982 aa19.26■□□□□ 0.67
PSPC1-203ENST00000471658 PTPRCAPQ14761 206 aa19.26■□□□□ 0.67
PSPC1-203ENST00000471658 CDKN3Q16667 212 aa19.26■□□□□ 0.67
PSPC1-203ENST00000471658 CRTC1Q6UUV9 634 aa19.26■□□□□ 0.67
PSPC1-203ENST00000471658 SPEM1Q8N4L4 309 aa19.26■□□□□ 0.67
PSPC1-203ENST00000471658 PPP1R16AQ96I34 528 aa19.26■□□□□ 0.67
PSPC1-203ENST00000471658 MCCC1Q96RQ3 725 aaPredicted RBP19.26■□□□□ 0.67
PSPC1-203ENST00000471658 EBNA1BP2Q99848 306 aaKnown RBP19.26■□□□□ 0.67
PSPC1-203ENST00000471658 PABPC3Q9H361 631 aaKnown RBP19.26■□□□□ 0.67
PSPC1-203ENST00000471658 POLMQ9NP87 494 aaPredicted RBP19.26■□□□□ 0.67
PSPC1-203ENST00000471658 ARL5AQ9Y689 179 aa19.26■□□□□ 0.67
PSPC1-203ENST00000471658 CAPN8A6NHC0 703 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 GOLGA8CPA6NN73 597 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 AP3B1O00203 1094 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 ADRB3P13945 408 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 LHCGRP22888 699 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 XPAP23025 273 aaPredicted RBP19.25■□□□□ 0.67
PSPC1-203ENST00000471658 NEK3P51956 506 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 PCID2Q5JVF3 399 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 PIP5KL1Q5T9C9 394 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 ANO7Q6IWH7 933 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 LYSMD3Q7Z3D4 306 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 GANCQ8TET4 914 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 EID2BQ96D98 161 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 HDAC8Q9BY41 377 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 TXLNGYQ9BZA5 131 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 IL22Q9GZX6 179 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 PLAC1Q9HBJ0 212 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 MAGEE1Q9HCI5 957 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 FBXL12Q9NXK8 326 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 SLC2A6Q9UGQ3 507 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 ZNF711Q9Y462 761 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 TCAF1Q9Y4C2 921 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 MYLKQ15746 1914 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 BDP1A6H8Y1 2624 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 EIF3HO15372 352 aaKnown RBP eCLIP19.25■□□□□ 0.67
PSPC1-203ENST00000471658 LDB2O43679 373 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 RNASEH2AO75792 299 aaKnown RBP19.25■□□□□ 0.67
PSPC1-203ENST00000471658 CLDN7O95471 211 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 TMEM31Q5JXX7 168 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 AGBL4Q5VU57 503 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 CAPN12Q6ZSI9 719 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 USP45Q70EL2 814 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 TMC3Q7Z5M5 1100 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 PGBD3Q8N328 593 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 TTC30BQ8N4P2 665 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 BRSK1Q8TDC3 778 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 PYROXD1Q8WU10 500 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.25■□□□□ 0.67
PSPC1-203ENST00000471658 STAMBPL1Q96FJ0 436 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 CFAP36Q96G28 342 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 SEMA4AQ9H3S1 761 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms