RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 B3GALT1Q9Y5Z6 326 aa19.09■□□□□ 0.65
NCKIPSD-209ENST00000470006 TMEM202A6NGA9 273 aa19.08■□□□□ 0.64
NCKIPSD-209ENST00000470006 CAPN5O15484 640 aaPredicted RBP19.08■□□□□ 0.64
NCKIPSD-209ENST00000470006 RAD1O60671 282 aa19.08■□□□□ 0.64
NCKIPSD-209ENST00000470006 PIGNO95427 931 aa19.08■□□□□ 0.64
NCKIPSD-209ENST00000470006 RHOQP17081 205 aa19.08■□□□□ 0.64
NCKIPSD-209ENST00000470006 KELP23276 732 aa19.08■□□□□ 0.64
NCKIPSD-209ENST00000470006 FLT3P36888 993 aa19.08■□□□□ 0.64
NCKIPSD-209ENST00000470006 ATP11AP98196 1134 aa19.08■□□□□ 0.64
NCKIPSD-209ENST00000470006 LACTB2Q53H82 288 aaPredicted RBP19.08■□□□□ 0.64
NCKIPSD-209ENST00000470006 ARTNQ5T4W7 220 aa19.08■□□□□ 0.64
NCKIPSD-209ENST00000470006 FOXR2Q6PJQ5 311 aa19.08■□□□□ 0.64
NCKIPSD-209ENST00000470006 SLC47A2Q86VL8 602 aa19.08■□□□□ 0.64
NCKIPSD-209ENST00000470006 FAM129CQ86XR2 697 aa19.08■□□□□ 0.64
NCKIPSD-209ENST00000470006 PLA2G15Q8NCC3 412 aa19.08■□□□□ 0.64
NCKIPSD-209ENST00000470006 AGBL5Q8NDL9 886 aa19.08■□□□□ 0.64
NCKIPSD-209ENST00000470006 SHC3Q92529 594 aa19.08■□□□□ 0.64
NCKIPSD-209ENST00000470006 KIAA1143Q96AT1 154 aaPredicted RBP19.08■□□□□ 0.64
NCKIPSD-209ENST00000470006 VOPP1Q96AW1 172 aa19.08■□□□□ 0.64
NCKIPSD-209ENST00000470006 GPN2Q9H9Y4 310 aaPredicted RBP19.08■□□□□ 0.64
NCKIPSD-209ENST00000470006 FGF22Q9HCT0 170 aa19.08■□□□□ 0.64
NCKIPSD-209ENST00000470006 PCDHGA3Q9Y5H0 932 aa19.08■□□□□ 0.64
NCKIPSD-209ENST00000470006 ZSCAN5CA6NGD5 496 aaPredicted RBP19.07■□□□□ 0.64
NCKIPSD-209ENST00000470006 ENO4A6NNW6 628 aa19.07■□□□□ 0.64
NCKIPSD-209ENST00000470006 INSIG1O15503 277 aa19.07■□□□□ 0.64
NCKIPSD-209ENST00000470006 MTSS1O43312 755 aa19.07■□□□□ 0.64
NCKIPSD-209ENST00000470006 KDELR3O43731 214 aa19.07■□□□□ 0.64
NCKIPSD-209ENST00000470006 MPSTP25325 297 aa19.07■□□□□ 0.64
NCKIPSD-209ENST00000470006 ARSDP51689 593 aa19.07■□□□□ 0.64
NCKIPSD-209ENST00000470006 SEPT6Q14141 434 aa19.07■□□□□ 0.64
NCKIPSD-209ENST00000470006 UGP2Q16851 508 aa19.07■□□□□ 0.64
NCKIPSD-209ENST00000470006 DEFB109BQ30KR1 87 aa19.07■□□□□ 0.64
NCKIPSD-209ENST00000470006 GBP6Q6ZN66 633 aa19.07■□□□□ 0.64
NCKIPSD-209ENST00000470006 PAF1Q8N7H5 531 aa19.07■□□□□ 0.64
NCKIPSD-209ENST00000470006 SPATA20Q8TB22 786 aa19.07■□□□□ 0.64
NCKIPSD-209ENST00000470006 FUBP1Q96AE4 644 aaKnown RBP19.07■□□□□ 0.64
NCKIPSD-209ENST00000470006 EXOC2Q96KP1 924 aa19.07■□□□□ 0.64
NCKIPSD-209ENST00000470006 ASPSCR1Q9BZE9 553 aa19.07■□□□□ 0.64
NCKIPSD-209ENST00000470006 TMEM248Q9NWD8 314 aa19.07■□□□□ 0.64
NCKIPSD-209ENST00000470006 MAN1B1Q9UKM7 699 aa19.07■□□□□ 0.64
NCKIPSD-209ENST00000470006 DUX1O43812 170 aa19.06■□□□□ 0.64
NCKIPSD-209ENST00000470006 MARSP56192 900 aaKnown RBP19.06■□□□□ 0.64
NCKIPSD-209ENST00000470006 KIAA1024LP59773 190 aa19.06■□□□□ 0.64
NCKIPSD-209ENST00000470006 CDO1Q16878 200 aa19.06■□□□□ 0.64
NCKIPSD-209ENST00000470006 C2CD6Q53TS8 623 aa19.06■□□□□ 0.64
NCKIPSD-209ENST00000470006 DCAF12Q5T6F0 453 aa19.06■□□□□ 0.64
NCKIPSD-209ENST00000470006 NKAIN2Q5VXU1 208 aa19.06■□□□□ 0.64
NCKIPSD-209ENST00000470006 XYLT1Q86Y38 959 aa19.06■□□□□ 0.64
NCKIPSD-209ENST00000470006 ZDHHC1Q8WTX9 485 aa19.06■□□□□ 0.64
NCKIPSD-209ENST00000470006 APOBEC4Q8WW27 367 aaKnown RBP19.06■□□□□ 0.64
NCKIPSD-209ENST00000470006 MIB2Q96AX9 1013 aa19.06■□□□□ 0.64
NCKIPSD-209ENST00000470006 SLC45A3Q96JT2 553 aa19.06■□□□□ 0.64
NCKIPSD-209ENST00000470006 DDA1Q9BW61 102 aa19.06■□□□□ 0.64
NCKIPSD-209ENST00000470006 PLEKHB1Q9UF11 243 aaPredicted RBP19.06■□□□□ 0.64
NCKIPSD-209ENST00000470006 DACH1Q9UI36 760 aa19.06■□□□□ 0.64
NCKIPSD-209ENST00000470006 ZDHHC9Q9Y397 364 aa19.06■□□□□ 0.64
NCKIPSD-209ENST00000470006 MFHAS1Q9Y4C4 1052 aa19.06■□□□□ 0.64
NCKIPSD-209ENST00000470006 RP1L1Q8IWN7 2480 aaPredicted RBP19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 PRR19A6NJB7 356 aa19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 TEX33O43247 280 aa19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 AGFG2O95081 481 aa19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 FGFR1OPO95684 399 aaKnown RBP19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 PRKCGP05129 697 aa19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 PNMA6AP0CW24 399 aaPredicted RBP19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 SCNN1AP37088 669 aa19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 LIMK2P53671 638 aa19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 CDC20Q12834 499 aa19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 KLRB1Q12918 225 aa19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 TRA2AQ13595 282 aaKnown RBP eCLIP19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 CLPPQ16740 277 aaPredicted RBP19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 EXOC3L4Q17RC7 722 aa19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 TSR1Q2NL82 804 aaKnown RBP19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 C16orf46Q6P387 395 aa19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 KDELC2Q7Z4H8 507 aa19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 PHLDB2Q86SQ0 1253 aa19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 NLRP14Q86W24 1093 aa19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 MSANTD4Q8NCY6 345 aa19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 CASKIN2Q8WXE0 1202 aa19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 TBC1D31Q96DN5 1066 aa19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 SUV39H2Q9H5I1 410 aa19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 RETREG1Q9H6L5 497 aa19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 SPATS2LQ9NUQ6 558 aaKnown RBP19.05■□□□□ 0.64
NCKIPSD-209ENST00000470006 EFCAB7A8K855 629 aa19.04■□□□□ 0.64
NCKIPSD-209ENST00000470006 PPP1R3GB7ZBB8 358 aa19.04■□□□□ 0.64
NCKIPSD-209ENST00000470006 FOXN3O00409 490 aaPredicted RBP19.04■□□□□ 0.64
NCKIPSD-209ENST00000470006 TNFRSF10CO14798 259 aa19.04■□□□□ 0.64
NCKIPSD-209ENST00000470006 ECEL1O95672 775 aa19.04■□□□□ 0.64
NCKIPSD-209ENST00000470006 CD1CP29017 333 aa19.04■□□□□ 0.64
NCKIPSD-209ENST00000470006 ADRA1BP35368 520 aa19.04■□□□□ 0.64
NCKIPSD-209ENST00000470006 CLCN1P35523 988 aa19.04■□□□□ 0.64
NCKIPSD-209ENST00000470006 GABRB2P47870 512 aa19.04■□□□□ 0.64
NCKIPSD-209ENST00000470006 MLLT10P55197 1068 aa19.04■□□□□ 0.64
NCKIPSD-209ENST00000470006 TRNP1Q6NT89 227 aa19.04■□□□□ 0.64
NCKIPSD-209ENST00000470006 UNC5BQ8IZJ1 945 aa19.04■□□□□ 0.64
NCKIPSD-209ENST00000470006 TEX19Q8NA77 164 aa19.04■□□□□ 0.64
NCKIPSD-209ENST00000470006 HCAR2Q8TDS4 363 aa19.04■□□□□ 0.64
NCKIPSD-209ENST00000470006 EFHD1Q9BUP0 239 aa19.04■□□□□ 0.64
NCKIPSD-209ENST00000470006 CARS2Q9HA77 564 aaKnown RBP19.04■□□□□ 0.64
NCKIPSD-209ENST00000470006 OCIAD1Q9NX40 245 aa19.04■□□□□ 0.64
NCKIPSD-209ENST00000470006 DNAJC12Q9UKB3 198 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms