RNA–Protein interactions for RNA: ENST00000469975.5

C4A-250, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best)

Gene C4A, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-250ENST00000469975 LIPIQ6XZB0 460 aa16.92■□□□□ 0.3
C4A-250ENST00000469975 RBM44Q6ZP01 1051 aaKnown RBP16.92■□□□□ 0.3
C4A-250ENST00000469975 PGBD5Q8N414 524 aa16.92■□□□□ 0.3
C4A-250ENST00000469975 FNIP1Q8TF40 1166 aa16.92■□□□□ 0.3
C4A-250ENST00000469975 OR1E3Q8WZA6 343 aa16.92■□□□□ 0.3
C4A-250ENST00000469975 HSPH1Q92598 858 aa16.92■□□□□ 0.3
C4A-250ENST00000469975 GLMNQ92990 594 aa16.92■□□□□ 0.3
C4A-250ENST00000469975 ECHDC3Q96DC8 303 aa16.92■□□□□ 0.3
C4A-250ENST00000469975 HIC2Q96JB3 615 aa16.92■□□□□ 0.3
C4A-250ENST00000469975 TBATAQ96M53 351 aa16.92■□□□□ 0.3
C4A-250ENST00000469975 ZNF578Q96N58 590 aaPredicted RBP16.92■□□□□ 0.3
C4A-250ENST00000469975 MRPL40Q9NQ50 206 aaKnown RBP16.92■□□□□ 0.3
C4A-250ENST00000469975 KLQ9UEF7 1012 aa16.92■□□□□ 0.3
C4A-250ENST00000469975 TMEM202A6NGA9 273 aa16.91■□□□□ 0.3
C4A-250ENST00000469975 EIF3CLB5ME19 914 aaKnown RBP16.91■□□□□ 0.3
C4A-250ENST00000469975 TRAFD1O14545 582 aaPredicted RBP16.91■□□□□ 0.3
C4A-250ENST00000469975 RECQL5O94762 991 aaPredicted RBP16.91■□□□□ 0.3
C4A-250ENST00000469975 RPIAP49247 311 aa16.91■□□□□ 0.3
C4A-250ENST00000469975 LBRQ14739 615 aaKnown RBP16.91■□□□□ 0.3
C4A-250ENST00000469975 NR1I3Q14994 352 aa16.91■□□□□ 0.3
C4A-250ENST00000469975 PTPRRQ15256 657 aa16.91■□□□□ 0.3
C4A-250ENST00000469975 ESRP1Q6NXG1 681 aaKnown RBP16.91■□□□□ 0.3
C4A-250ENST00000469975 FSTL5Q8N475 847 aaPredicted RBP16.91■□□□□ 0.3
C4A-250ENST00000469975 ZNF248Q8NDW4 579 aa16.91■□□□□ 0.3
C4A-250ENST00000469975 CCDC74AQ96AQ1 378 aa16.91■□□□□ 0.3
C4A-250ENST00000469975 PRR11Q96HE9 360 aaPredicted RBP16.91■□□□□ 0.3
C4A-250ENST00000469975 WDR92Q96MX6 357 aa16.91■□□□□ 0.3
C4A-250ENST00000469975 UBL7Q96S82 380 aaPredicted RBP16.91■□□□□ 0.3
C4A-250ENST00000469975 EIF3CQ99613 913 aaKnown RBP16.91■□□□□ 0.3
C4A-250ENST00000469975 FUCA2Q9BTY2 467 aa16.91■□□□□ 0.3
C4A-250ENST00000469975 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.91■□□□□ 0.3
C4A-250ENST00000469975 CPNE5Q9HCH3 593 aa16.91■□□□□ 0.3
C4A-250ENST00000469975 FGF22Q9HCT0 170 aa16.91■□□□□ 0.3
C4A-250ENST00000469975 DONSONQ9NYP3 566 aa16.91■□□□□ 0.3
C4A-250ENST00000469975 GPR34Q9UPC5 381 aa16.91■□□□□ 0.3
C4A-250ENST00000469975 SCINQ9Y6U3 715 aa16.91■□□□□ 0.3
C4A-250ENST00000469975 ARHGEF17Q96PE2 2063 aaPredicted RBP16.9■□□□□ 0.3
C4A-250ENST00000469975 EIF4E1BA6NMX2 242 aaKnown RBP16.9■□□□□ 0.3
C4A-250ENST00000469975 TMEM110-MUSTN1A8MSY1 372 aa16.9■□□□□ 0.3
C4A-250ENST00000469975 DXOO77932 396 aaKnown RBP16.9■□□□□ 0.3
C4A-250ENST00000469975 PEX11BO96011 259 aa16.9■□□□□ 0.3
C4A-250ENST00000469975 SERPINC1P01008 464 aa16.9■□□□□ 0.3
C4A-250ENST00000469975 ELFN1P0C7U0 828 aa16.9■□□□□ 0.3
C4A-250ENST00000469975 HTR1BP28222 390 aa16.9■□□□□ 0.3
C4A-250ENST00000469975 HCAR3P49019 387 aa16.9■□□□□ 0.3
C4A-250ENST00000469975 MTM1Q13496 603 aa16.9■□□□□ 0.3
C4A-250ENST00000469975 AGERQ15109 404 aa16.9■□□□□ 0.3
C4A-250ENST00000469975 ELOCQ15369 112 aa16.9■□□□□ 0.3
C4A-250ENST00000469975 HGSNATQ68CP4 663 aa16.9■□□□□ 0.3
C4A-250ENST00000469975 DPPA4Q7L190 304 aa16.9■□□□□ 0.3
C4A-250ENST00000469975 B3GNT8Q7Z7M8 397 aa16.9■□□□□ 0.3
C4A-250ENST00000469975 SDR16C5Q8N3Y7 309 aa16.9■□□□□ 0.3
C4A-250ENST00000469975 ARL10Q8N8L6 244 aa16.9■□□□□ 0.3
C4A-250ENST00000469975 NAT6Q93015 286 aa16.9■□□□□ 0.3
C4A-250ENST00000469975 LGR4Q9BXB1 951 aa16.9■□□□□ 0.3
C4A-250ENST00000469975 ISCUQ9H1K1 167 aa16.9■□□□□ 0.3
C4A-250ENST00000469975 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.9■□□□□ 0.3
C4A-250ENST00000469975 B4GALT6Q9UBX8 382 aa16.9■□□□□ 0.3
C4A-250ENST00000469975 PCDHGC4Q9Y5F7 938 aa16.9■□□□□ 0.3
C4A-250ENST00000469975 SCN8AQ9UQD0 1980 aa16.89■□□□□ 0.3
C4A-250ENST00000469975 H3BRJ5 948 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 AGRPO00253 132 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 TNFP01375 233 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 ALPIP09923 528 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 RARAP10276 462 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 PCK1P35558 622 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 BLKP51451 505 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 MAXP61244 160 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 CCL7P80098 99 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 NSUN2Q08J23 767 aaKnown RBP eCLIP16.89■□□□□ 0.29
C4A-250ENST00000469975 SPIDRQ14159 915 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 RFTN1Q14699 578 aaPredicted RBP16.89■□□□□ 0.29
C4A-250ENST00000469975 ACOX1Q15067 660 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 DPYSL2Q16555 572 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 TDRD12Q587J7 1177 aaKnown RBP16.89■□□□□ 0.29
C4A-250ENST00000469975 TMCO4Q5TGY1 634 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 DENND2CQ68D51 928 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 GPR155Q7Z3F1 870 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 POLNQ7Z5Q5 900 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 CPNE8Q86YQ8 564 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 PSTKQ8IV42 348 aaKnown RBP16.89■□□□□ 0.29
C4A-250ENST00000469975 LSMEM2Q8N112 164 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 CCL4L1Q8NHW4 92 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 TPCN2Q8NHX9 752 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 PDCD6IPQ8WUM4 868 aaKnown RBP16.89■□□□□ 0.29
C4A-250ENST00000469975 KCNE4Q8WWG9 221 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 CSPG4P5Q96PW8 444 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 PSKH2Q96QS6 385 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 THAP2Q9H0W7 228 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 SUDS3Q9H7L9 328 aaPredicted RBP16.89■□□□□ 0.29
C4A-250ENST00000469975 SEPT3Q9UH03 358 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 MGAQ8IWI9 3026 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 UNC13CQ8NB66 2214 aa16.89■□□□□ 0.29
C4A-250ENST00000469975 GCN1Q92616 2671 aaKnown RBP16.89■□□□□ 0.29
C4A-250ENST00000469975 A0A0U1RQS6 177 aa16.88■□□□□ 0.29
C4A-250ENST00000469975 NTN3O00634 580 aaPredicted RBP16.88■□□□□ 0.29
C4A-250ENST00000469975 ATXN7O15265 892 aaPredicted RBP16.88■□□□□ 0.29
C4A-250ENST00000469975 KLK10O43240 276 aa16.88■□□□□ 0.29
C4A-250ENST00000469975 TCEA3O75764 348 aa16.88■□□□□ 0.29
C4A-250ENST00000469975 C1QL1O75973 258 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms