RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 SRP54P61011 504 aaKnown RBP24.62■■□□□ 1.53
PTCH1-210ENST00000468211 SLC10A7Q0GE19 358 aa24.62■■□□□ 1.53
PTCH1-210ENST00000468211 LIPIQ6XZB0 460 aa24.62■■□□□ 1.53
PTCH1-210ENST00000468211 FSTL5Q8N475 847 aaPredicted RBP24.62■■□□□ 1.53
PTCH1-210ENST00000468211 TPCN2Q8NHX9 752 aa24.62■■□□□ 1.53
PTCH1-210ENST00000468211 NAT6Q93015 286 aa24.62■■□□□ 1.53
PTCH1-210ENST00000468211 PDXPQ96GD0 296 aa24.62■■□□□ 1.53
PTCH1-210ENST00000468211 ETNK2Q9NVF9 386 aa24.62■■□□□ 1.53
PTCH1-210ENST00000468211 UNC13CQ8NB66 2214 aa24.61■■□□□ 1.53
PTCH1-210ENST00000468211 A8MX80 341 aa24.61■■□□□ 1.53
PTCH1-210ENST00000468211 RECQL5O94762 991 aaPredicted RBP24.61■■□□□ 1.53
PTCH1-210ENST00000468211 CTSEP14091 401 aa24.61■■□□□ 1.53
PTCH1-210ENST00000468211 SCNN1BP51168 640 aa24.61■■□□□ 1.53
PTCH1-210ENST00000468211 ERVPABLB-1P60509 514 aa24.61■■□□□ 1.53
PTCH1-210ENST00000468211 BCL2L1Q07817 233 aa24.61■■□□□ 1.53
PTCH1-210ENST00000468211 NSUN2Q08J23 767 aaKnown RBP eCLIP24.61■■□□□ 1.53
PTCH1-210ENST00000468211 MTM1Q13496 603 aa24.61■■□□□ 1.53
PTCH1-210ENST00000468211 ELOCQ15369 112 aa24.61■■□□□ 1.53
PTCH1-210ENST00000468211 FILIP1LQ4L180 1135 aa24.61■■□□□ 1.53
PTCH1-210ENST00000468211 ESRP1Q6NXG1 681 aaKnown RBP24.61■■□□□ 1.53
PTCH1-210ENST00000468211 PSTKQ8IV42 348 aaKnown RBP24.61■■□□□ 1.53
PTCH1-210ENST00000468211 PELI3Q8N2H9 469 aa24.61■■□□□ 1.53
PTCH1-210ENST00000468211 WDR92Q96MX6 357 aa24.61■■□□□ 1.53
PTCH1-210ENST00000468211 KLQ9UEF7 1012 aa24.61■■□□□ 1.53
PTCH1-210ENST00000468211 DOLKQ9UPQ8 538 aa24.61■■□□□ 1.53
PTCH1-210ENST00000468211 ATMQ13315 3056 aa24.61■■□□□ 1.53
PTCH1-210ENST00000468211 TMEM202A6NGA9 273 aa24.6■■□□□ 1.53
PTCH1-210ENST00000468211 TCEA3O75764 348 aa24.6■■□□□ 1.53
PTCH1-210ENST00000468211 AMPD1P23109 780 aa24.6■■□□□ 1.53
PTCH1-210ENST00000468211 HTR1BP28222 390 aa24.6■■□□□ 1.53
PTCH1-210ENST00000468211 ZNF165P49910 485 aa24.6■■□□□ 1.53
PTCH1-210ENST00000468211 CXADRP78310 365 aa24.6■■□□□ 1.53
PTCH1-210ENST00000468211 RFTN1Q14699 578 aaPredicted RBP24.6■■□□□ 1.53
PTCH1-210ENST00000468211 LBRQ14739 615 aaKnown RBP24.6■■□□□ 1.53
PTCH1-210ENST00000468211 NR1I3Q14994 352 aa24.6■■□□□ 1.53
PTCH1-210ENST00000468211 IQCB1Q15051 598 aa24.6■■□□□ 1.53
PTCH1-210ENST00000468211 SMTNL2Q2TAL5 461 aa24.6■■□□□ 1.53
PTCH1-210ENST00000468211 TXNRD3NBQ6F5E7 133 aa24.6■■□□□ 1.53
PTCH1-210ENST00000468211 DPPA4Q7L190 304 aa24.6■■□□□ 1.53
PTCH1-210ENST00000468211 GPR155Q7Z3F1 870 aa24.6■■□□□ 1.53
PTCH1-210ENST00000468211 ARL10Q8N8L6 244 aa24.6■■□□□ 1.53
PTCH1-210ENST00000468211 OR1E3Q8WZA6 343 aa24.6■■□□□ 1.53
PTCH1-210ENST00000468211 SLC46A1Q96NT5 459 aa24.6■■□□□ 1.53
PTCH1-210ENST00000468211 PSKH2Q96QS6 385 aa24.6■■□□□ 1.53
PTCH1-210ENST00000468211 ISCUQ9H1K1 167 aa24.6■■□□□ 1.53
PTCH1-210ENST00000468211 SCINQ9Y6U3 715 aa24.6■■□□□ 1.53
PTCH1-210ENST00000468211 CFAP69A5D8W1 941 aa24.59■■□□□ 1.53
PTCH1-210ENST00000468211 EIF4E1BA6NMX2 242 aaKnown RBP24.59■■□□□ 1.53
PTCH1-210ENST00000468211 NTN3O00634 580 aaPredicted RBP24.59■■□□□ 1.53
PTCH1-210ENST00000468211 ATXN7O15265 892 aaPredicted RBP24.59■■□□□ 1.53
PTCH1-210ENST00000468211 PEX11BO96011 259 aa24.59■■□□□ 1.53
PTCH1-210ENST00000468211 ALPIP09923 528 aa24.59■■□□□ 1.53
PTCH1-210ENST00000468211 CAVIN1Q6NZI2 390 aaKnown RBP24.59■■□□□ 1.53
PTCH1-210ENST00000468211 LVRNQ6Q4G3 990 aa24.59■■□□□ 1.53
PTCH1-210ENST00000468211 IGF2-ASQ6U949 168 aa24.59■■□□□ 1.53
PTCH1-210ENST00000468211 SFTPA2Q8IWL1 248 aa24.59■■□□□ 1.53
PTCH1-210ENST00000468211 PGBD5Q8N414 524 aa24.59■■□□□ 1.53
PTCH1-210ENST00000468211 SLC39A7Q92504 469 aa24.59■■□□□ 1.53
PTCH1-210ENST00000468211 CCDC74AQ96AQ1 378 aa24.59■■□□□ 1.53
PTCH1-210ENST00000468211 SYNDIG1Q9H7V2 258 aa24.59■■□□□ 1.53
PTCH1-210ENST00000468211 CPNE5Q9HCH3 593 aa24.59■■□□□ 1.53
PTCH1-210ENST00000468211 FGF22Q9HCT0 170 aa24.59■■□□□ 1.53
PTCH1-210ENST00000468211 MRPL40Q9NQ50 206 aaKnown RBP24.59■■□□□ 1.53
PTCH1-210ENST00000468211 GPR34Q9UPC5 381 aa24.59■■□□□ 1.53
PTCH1-210ENST00000468211 C1QL1O75973 258 aa24.58■■□□□ 1.53
PTCH1-210ENST00000468211 ELFN1P0C7U0 828 aa24.58■■□□□ 1.53
PTCH1-210ENST00000468211 PCK1P35558 622 aa24.58■■□□□ 1.53
PTCH1-210ENST00000468211 DPYSL2Q16555 572 aa24.58■■□□□ 1.53
PTCH1-210ENST00000468211 TMCO4Q5TGY1 634 aa24.58■■□□□ 1.53
PTCH1-210ENST00000468211 HGSNATQ68CP4 663 aa24.58■■□□□ 1.53
PTCH1-210ENST00000468211 PCSK4Q6UW60 755 aa24.58■■□□□ 1.53
PTCH1-210ENST00000468211 KCNE4Q8WWG9 221 aa24.58■■□□□ 1.53
PTCH1-210ENST00000468211 GRAMD1AQ96CP6 724 aa24.58■■□□□ 1.53
PTCH1-210ENST00000468211 RBM15Q96T37 977 aaKnown RBP eCLIP24.58■■□□□ 1.53
PTCH1-210ENST00000468211 FUCA2Q9BTY2 467 aa24.58■■□□□ 1.53
PTCH1-210ENST00000468211 LGR4Q9BXB1 951 aa24.58■■□□□ 1.53
PTCH1-210ENST00000468211 THSD1Q9NS62 852 aa24.58■■□□□ 1.53
PTCH1-210ENST00000468211 SEPT3Q9UH03 358 aa24.58■■□□□ 1.53
PTCH1-210ENST00000468211 SCN8AQ9UQD0 1980 aa24.58■■□□□ 1.52
PTCH1-210ENST00000468211 H3BRJ5 948 aa24.57■■□□□ 1.52
PTCH1-210ENST00000468211 TNFP01375 233 aa24.57■■□□□ 1.52
PTCH1-210ENST00000468211 ZNF135P52742 658 aaPredicted RBP24.57■■□□□ 1.52
PTCH1-210ENST00000468211 KIAA1024LP59773 190 aa24.57■■□□□ 1.52
PTCH1-210ENST00000468211 AP1S1P61966 158 aa24.57■■□□□ 1.52
PTCH1-210ENST00000468211 SPIDRQ14159 915 aa24.57■■□□□ 1.52
PTCH1-210ENST00000468211 FOXR1Q6PIV2 292 aa24.57■■□□□ 1.52
PTCH1-210ENST00000468211 POLNQ7Z5Q5 900 aa24.57■■□□□ 1.52
PTCH1-210ENST00000468211 B3GNT8Q7Z7M8 397 aa24.57■■□□□ 1.52
PTCH1-210ENST00000468211 GKN2Q86XP6 184 aa24.57■■□□□ 1.52
PTCH1-210ENST00000468211 LZTR1Q8N653 840 aa24.57■■□□□ 1.52
PTCH1-210ENST00000468211 PAF1Q8N7H5 531 aa24.57■■□□□ 1.52
PTCH1-210ENST00000468211 SCG3Q8WXD2 468 aaKnown RBP24.57■■□□□ 1.52
PTCH1-210ENST00000468211 HSPH1Q92598 858 aa24.57■■□□□ 1.52
PTCH1-210ENST00000468211 BTBD6Q96KE9 485 aa24.57■■□□□ 1.52
PTCH1-210ENST00000468211 ZWILCHQ9H900 591 aa24.57■■□□□ 1.52
PTCH1-210ENST00000468211 MRPL47Q9HD33 250 aaKnown RBP24.57■■□□□ 1.52
PTCH1-210ENST00000468211 B4GALT6Q9UBX8 382 aa24.57■■□□□ 1.52
PTCH1-210ENST00000468211 PCDHGC4Q9Y5F7 938 aa24.57■■□□□ 1.52
PTCH1-210ENST00000468211 PCDHGA8Q9Y5G5 932 aa24.57■■□□□ 1.52
PTCH1-210ENST00000468211 DGKBQ9Y6T7 804 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms