RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 CCNI2Q6ZMN8 369 aaPredicted RBP14.68□□□□□ -0.06
COMMD3-206ENST00000468179 MACC1Q6ZN28 852 aa14.68□□□□□ -0.06
COMMD3-206ENST00000468179 USP45Q70EL2 814 aa14.68□□□□□ -0.06
COMMD3-206ENST00000468179 BZW1Q7L1Q6 419 aaKnown RBP14.68□□□□□ -0.06
COMMD3-206ENST00000468179 TMPRSS12Q86WS5 348 aa14.68□□□□□ -0.06
COMMD3-206ENST00000468179 ZSWIM9Q86XI8 627 aa14.68□□□□□ -0.06
COMMD3-206ENST00000468179 TMTC1Q8IUR5 882 aa14.68□□□□□ -0.06
COMMD3-206ENST00000468179 PGBD5Q8N414 524 aa14.68□□□□□ -0.06
COMMD3-206ENST00000468179 CCNYQ8ND76 341 aa14.68□□□□□ -0.06
COMMD3-206ENST00000468179 RAPGEF5Q92565 580 aa14.68□□□□□ -0.06
COMMD3-206ENST00000468179 MAML1Q92585 1016 aa14.68□□□□□ -0.06
COMMD3-206ENST00000468179 BRD8Q9H0E9 1235 aa14.68□□□□□ -0.06
COMMD3-206ENST00000468179 RBSNQ9H1K0 784 aa14.68□□□□□ -0.06
COMMD3-206ENST00000468179 SPASTQ9UBP0 616 aa14.68□□□□□ -0.06
COMMD3-206ENST00000468179 PCDHGC4Q9Y5F7 938 aa14.68□□□□□ -0.06
COMMD3-206ENST00000468179 LAMA1P25391 3075 aa14.68□□□□□ -0.06
COMMD3-206ENST00000468179 KNL1Q8NG31 2342 aa14.68□□□□□ -0.06
COMMD3-206ENST00000468179 C1QTNF9BB2RNN3 333 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 APOL1O14791 398 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 AQP9O43315 295 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 SIGLEC6O43699 453 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 KRT1P04264 644 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 C1QTNF9P0C862 333 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 CCNB1P14635 433 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 KELP23276 732 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 ACP1P24666 158 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 HADHBP55084 474 aaKnown RBP14.67□□□□□ -0.06
COMMD3-206ENST00000468179 E2F1Q01094 437 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 PPARDQ03181 441 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 ARHGEF7Q14155 803 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 SMAD1Q15797 465 aaKnown RBP14.67□□□□□ -0.06
COMMD3-206ENST00000468179 WSCD2Q2TBF2 565 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 PROX2Q3B8N5 592 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 ZNF542PQ5EBM4 170 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 FAXCQ5TGI0 409 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 LIPIQ6XZB0 460 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 CPNE8Q86YQ8 564 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 CCDC13Q8IYE1 715 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 PQLC3Q8N755 202 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 FAM181AQ8N9Y4 354 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 KDF1Q8NAX2 398 aaPredicted RBP14.67□□□□□ -0.06
COMMD3-206ENST00000468179 GATA6Q92908 595 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 GLMNQ92990 594 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 HDAC11Q96DB2 347 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 SEMA3CQ99985 751 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 MBNL1Q9NR56 388 aaKnown RBP14.67□□□□□ -0.06
COMMD3-206ENST00000468179 RBM22Q9NW64 420 aaKnown RBP eCLIP14.67□□□□□ -0.06
COMMD3-206ENST00000468179 UCKL1Q9NWZ5 548 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 DNPEPQ9ULA0 475 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 COQ6Q9Y2Z9 468 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.67□□□□□ -0.06
COMMD3-206ENST00000468179 PCDHA13Q9Y5I0 950 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 TRPM6Q9BX84 2022 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 COL5A1P20908 1838 aaPredicted RBP14.67□□□□□ -0.06
COMMD3-206ENST00000468179 CABIN1Q9Y6J0 2220 aa14.67□□□□□ -0.06
COMMD3-206ENST00000468179 A0A0A6YYK5 440 aaPredicted RBP14.66□□□□□ -0.06
COMMD3-206ENST00000468179 PDE2AO00408 941 aaPredicted RBP14.66□□□□□ -0.06
COMMD3-206ENST00000468179 TRIM38O00635 465 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 TPP1O14773 563 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 PPP1R12AO14974 1030 aaPredicted RBP14.66□□□□□ -0.06
COMMD3-206ENST00000468179 FFAR2O15552 330 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 RECQL5O94762 991 aaPredicted RBP14.66□□□□□ -0.06
COMMD3-206ENST00000468179 PGLSO95336 258 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 PRKCGP05129 697 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 VIPR1P32241 457 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 ACADVLP49748 655 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 MAXP61244 160 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 EIF2B5Q13144 721 aaKnown RBP14.66□□□□□ -0.06
COMMD3-206ENST00000468179 DNAJC3Q13217 504 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 INPP5AQ14642 412 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 ACOX1Q15067 660 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 PDK1Q15118 436 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 DHRS13Q6UX07 377 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 PHACTR4Q8IZ21 702 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 SDR16C5Q8N3Y7 309 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 ZNF548Q8NEK5 533 aaPredicted RBP14.66□□□□□ -0.06
COMMD3-206ENST00000468179 TPCN2Q8NHX9 752 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 LMX1AQ8TE12 382 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 SCG3Q8WXD2 468 aaKnown RBP14.66□□□□□ -0.06
COMMD3-206ENST00000468179 SCRN2Q96FV2 425 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 IL12RB2Q99665 862 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 APOOQ9BUR5 198 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 DTLQ9NZJ0 730 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 APOBEC3BQ9UH17 382 aaKnown RBP14.66□□□□□ -0.06
COMMD3-206ENST00000468179 RAI2Q9Y5P3 530 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 TMEM131Q92545 1883 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 TTC24A2A3L6 582 aaPredicted RBP14.66□□□□□ -0.06
COMMD3-206ENST00000468179 K7ESM1 405 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 PSMD11O00231 422 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 CACNB4O00305 520 aaPredicted RBP14.66□□□□□ -0.06
COMMD3-206ENST00000468179 PSTPIP1O43586 416 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 RASGRP1O95267 797 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 PCCBP05166 539 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 HOXC4P09017 264 aaPredicted RBP14.66□□□□□ -0.06
COMMD3-206ENST00000468179 CKMT1AP12532 417 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 CTSEP14091 401 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 JUPP14923 745 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 COMTP21964 271 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 RPIAP49247 311 aa14.66□□□□□ -0.06
COMMD3-206ENST00000468179 EPHB1P54762 984 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms