RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.23□□□□□ -0.77
MSH5-213ENST00000468136 OR4L1Q8NH43 312 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 PDCD6IPQ8WUM4 868 aaKnown RBP10.23□□□□□ -0.77
MSH5-213ENST00000468136 IRF7Q92985 503 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 HDAC10Q969S8 669 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 WBP2Q969T9 261 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 CDKN2AIPNLQ96HQ2 116 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 LMLNQ96KR4 655 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 ZNF641Q96N77 438 aaPredicted RBP10.23□□□□□ -0.77
MSH5-213ENST00000468136 MRPL57Q9BQC6 102 aaKnown RBP10.23□□□□□ -0.77
MSH5-213ENST00000468136 CPEB1Q9BZB8 566 aaKnown RBP10.23□□□□□ -0.77
MSH5-213ENST00000468136 SFXN1Q9H9B4 322 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 SYTL2Q9HCH5 934 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 SPHK2Q9NRA0 654 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 CATSPERZQ9NTU4 200 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 MRGBPQ9NV56 204 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 VWA7Q9Y334 891 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 PKP3Q9Y446 797 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 OBSL1O75147 1896 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 CFAP73A6NFT4 308 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 SLCO1B7G3V0H7 640 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 TRAFD1O14545 582 aaPredicted RBP10.22□□□□□ -0.77
MSH5-213ENST00000468136 STX7O15400 261 aaKnown RBP10.22□□□□□ -0.77
MSH5-213ENST00000468136 CD3EAPO15446 510 aaKnown RBP10.22□□□□□ -0.77
MSH5-213ENST00000468136 SNAP91O60641 907 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 TRIM13O60858 407 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 MOSPD3O75425 235 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 FSBPO95073 299 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 PGLSO95336 258 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 PRLP01236 227 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 PYGLP06737 847 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 MYL2P10916 166 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 RALBP11234 206 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 BGNP21810 368 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 GABRB3P28472 473 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 PMLP29590 882 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 SUOXP51687 545 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 ARFIP2P53365 341 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 POLR2LP62875 67 aaKnown RBP10.22□□□□□ -0.77
MSH5-213ENST00000468136 OCRLQ01968 901 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 CAMK1Q14012 370 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 DUSP6Q16828 381 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 FSCBQ5H9T9 825 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 FAM182AQ5T1J6 154 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 KDELC2Q7Z4H8 507 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 KIAA0907Q7Z7F0 614 aaPredicted RBP10.22□□□□□ -0.77
MSH5-213ENST00000468136 RAVER1Q8IY67 606 aaKnown RBP10.22□□□□□ -0.77
MSH5-213ENST00000468136 AHI1Q8N157 1196 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 CBARPQ8N350 705 aaPredicted RBP10.22□□□□□ -0.77
MSH5-213ENST00000468136 OR2AP1Q8NGE2 309 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 HCAR2Q8TDS4 363 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 MYO19Q96H55 970 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 LRIG1Q96JA1 1093 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 ELMO2Q96JJ3 720 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 LRRC37BQ96QE4 947 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 LYSMD1Q96S90 227 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 WWP1Q9H0M0 922 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 CCDC68Q9H2F9 335 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 MRPL46Q9H2W6 279 aaKnown RBP10.22□□□□□ -0.77
MSH5-213ENST00000468136 PIDD1Q9HB75 910 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 TXLNGQ9NUQ3 528 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 SLC2A6Q9UGQ3 507 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 MSRAQ9UJ68 235 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 APPL1Q9UKG1 709 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 TMCO1Q9UM00 188 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 CHKBQ9Y259 395 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.22□□□□□ -0.77
MSH5-213ENST00000468136 PPIL1Q9Y3C6 166 aa10.22□□□□□ -0.77
MSH5-213ENST00000468136 MRPS23Q9Y3D9 190 aaKnown RBP10.22□□□□□ -0.77
MSH5-213ENST00000468136 MIA3Q5JRA6 1907 aa10.21□□□□□ -0.77
MSH5-213ENST00000468136 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.21□□□□□ -0.77
MSH5-213ENST00000468136 CCDC195A0A1B0GUA6 201 aa10.21□□□□□ -0.77
MSH5-213ENST00000468136 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.21□□□□□ -0.77
MSH5-213ENST00000468136 WDR91A4D1P6 747 aa10.21□□□□□ -0.77
MSH5-213ENST00000468136 WASH3PC4AMC7 463 aa10.21□□□□□ -0.77
MSH5-213ENST00000468136 F8W8V4 182 aa10.21□□□□□ -0.77
MSH5-213ENST00000468136 H3BMM5 538 aa10.21□□□□□ -0.77
MSH5-213ENST00000468136 HOXC11O43248 304 aaPredicted RBP10.21□□□□□ -0.77
MSH5-213ENST00000468136 CCDC22O60826 627 aa10.21□□□□□ -0.77
MSH5-213ENST00000468136 DNAJC6O75061 913 aa10.21□□□□□ -0.77
MSH5-213ENST00000468136 POP4O95707 220 aaKnown RBP10.21□□□□□ -0.77
MSH5-213ENST00000468136 S1PR4O95977 384 aa10.21□□□□□ -0.77
MSH5-213ENST00000468136 ADH1CP00326 375 aa10.21□□□□□ -0.77
MSH5-213ENST00000468136 GOT2P00505 430 aaKnown RBP10.21□□□□□ -0.77
MSH5-213ENST00000468136 SRPRAP08240 638 aaKnown RBP10.21□□□□□ -0.77
MSH5-213ENST00000468136 SLC35E2BP0CK96 405 aa10.21□□□□□ -0.77
MSH5-213ENST00000468136 PABPC1P11940 636 aaKnown RBP10.21□□□□□ -0.77
MSH5-213ENST00000468136 EPCAMP16422 314 aa10.21□□□□□ -0.77
MSH5-213ENST00000468136 GLDCP23378 1020 aa10.21□□□□□ -0.77
MSH5-213ENST00000468136 HMGCLP35914 325 aa10.21□□□□□ -0.77
MSH5-213ENST00000468136 CCR2P41597 374 aa10.21□□□□□ -0.77
MSH5-213ENST00000468136 RECQLP46063 649 aaPredicted RBP10.21□□□□□ -0.77
MSH5-213ENST00000468136 STC1P52823 247 aa10.21□□□□□ -0.77
MSH5-213ENST00000468136 DNAJB13P59910 316 aa10.21□□□□□ -0.77
MSH5-213ENST00000468136 MPP1Q00013 466 aa10.21□□□□□ -0.77
MSH5-213ENST00000468136 BST1Q10588 318 aa10.21□□□□□ -0.77
MSH5-213ENST00000468136 TRAF2Q12933 501 aa10.21□□□□□ -0.77
MSH5-213ENST00000468136 CTBP1Q13363 440 aa10.21□□□□□ -0.77
MSH5-213ENST00000468136 GALNT3Q14435 633 aa10.21□□□□□ -0.77
MSH5-213ENST00000468136 IHHQ14623 411 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms