RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 ITIH2P19823 946 aa12.03□□□□□ -0.48
GTF3A-205ENST00000466776 CCKBRP32239 447 aa12.03□□□□□ -0.48
GTF3A-205ENST00000466776 MMP12P39900 470 aa12.03□□□□□ -0.48
GTF3A-205ENST00000466776 CSNK1DP48730 415 aa12.03□□□□□ -0.48
GTF3A-205ENST00000466776 PDX1P52945 283 aa12.03□□□□□ -0.48
GTF3A-205ENST00000466776 COPB1P53618 953 aaKnown RBP12.03□□□□□ -0.48
GTF3A-205ENST00000466776 KIAA1024LP59773 190 aa12.03□□□□□ -0.48
GTF3A-205ENST00000466776 UBXN1Q04323 297 aa12.03□□□□□ -0.48
GTF3A-205ENST00000466776 BCL2L1Q07817 233 aa12.03□□□□□ -0.48
GTF3A-205ENST00000466776 CLN3Q13286 438 aa12.03□□□□□ -0.48
GTF3A-205ENST00000466776 LY6DQ14210 128 aa12.03□□□□□ -0.48
GTF3A-205ENST00000466776 RFTN1Q14699 578 aaPredicted RBP12.03□□□□□ -0.48
GTF3A-205ENST00000466776 CYTH1Q15438 398 aa12.03□□□□□ -0.48
GTF3A-205ENST00000466776 TSR1Q2NL82 804 aaKnown RBP12.03□□□□□ -0.48
GTF3A-205ENST00000466776 TAF8Q7Z7C8 310 aa12.03□□□□□ -0.48
GTF3A-205ENST00000466776 NETO2Q8NC67 525 aa12.03□□□□□ -0.48
GTF3A-205ENST00000466776 OR56A4Q8NGH8 313 aa12.03□□□□□ -0.48
GTF3A-205ENST00000466776 RBM15Q96T37 977 aaKnown RBP eCLIP12.03□□□□□ -0.48
GTF3A-205ENST00000466776 PCDHB18PQ96TA0 734 aa12.03□□□□□ -0.48
GTF3A-205ENST00000466776 AGPAT1Q99943 283 aa12.03□□□□□ -0.48
GTF3A-205ENST00000466776 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.03□□□□□ -0.48
GTF3A-205ENST00000466776 LRRN3Q9H3W5 708 aa12.03□□□□□ -0.48
GTF3A-205ENST00000466776 PDFQ9HBH1 243 aa12.03□□□□□ -0.48
GTF3A-205ENST00000466776 AKAP7Q9P0M2 348 aaPredicted RBP12.03□□□□□ -0.48
GTF3A-205ENST00000466776 SEPT10Q9P0V9 454 aa12.03□□□□□ -0.48
GTF3A-205ENST00000466776 AP4E1Q9UPM8 1137 aa12.03□□□□□ -0.48
GTF3A-205ENST00000466776 SIK3Q9Y2K2 1263 aa12.03□□□□□ -0.48
GTF3A-205ENST00000466776 OR1A2Q9Y585 309 aa12.03□□□□□ -0.48
GTF3A-205ENST00000466776 LGALS16A8MUM7 142 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 EPHB6O15197 1021 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 RNF8O76064 485 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 FERP16591 822 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 CDK11BP21127 795 aaKnown RBP12.02□□□□□ -0.49
GTF3A-205ENST00000466776 UGT1A5P35504 534 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 RENBPP51606 427 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 ZNF135P52742 658 aaPredicted RBP12.02□□□□□ -0.49
GTF3A-205ENST00000466776 RPL7AP62424 266 aaKnown RBP12.02□□□□□ -0.49
GTF3A-205ENST00000466776 CCL7P80098 99 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 PEX6Q13608 980 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 ARHGEF7Q14155 803 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 TCEA2Q15560 299 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 ACAD10Q6JQN1 1059 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 XKR5Q6UX68 686 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 SRLQ86TD4 932 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 CAMK1DQ8IU85 385 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 CCNJLQ8IV13 435 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 FAM46DQ8NEK8 389 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 KIAA1524Q8TCG1 905 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 CMKLR1Q99788 373 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 LRRC19Q9H756 370 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 PARVAQ9NVD7 372 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 FANCLQ9NW38 375 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 KCTD5Q9NXV2 234 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 APPL1Q9UKG1 709 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 ACSL6Q9UKU0 697 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 PCDHB11Q9Y5F2 797 aa12.02□□□□□ -0.49
GTF3A-205ENST00000466776 A0A1W2PQ67 120 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 TCRBV5S1A1TA0A578 114 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 J3KR12 359 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 TNFRSF10CO14798 259 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 NVLO15381 856 aaKnown RBP12.01□□□□□ -0.49
GTF3A-205ENST00000466776 RECQL5O94762 991 aaPredicted RBP12.01□□□□□ -0.49
GTF3A-205ENST00000466776 HOXC4P09017 264 aaPredicted RBP12.01□□□□□ -0.49
GTF3A-205ENST00000466776 LIPCP11150 499 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 PSMA2P25787 234 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 SLC5A2P31639 672 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 PAPOLAP51003 745 aaKnown RBP12.01□□□□□ -0.49
GTF3A-205ENST00000466776 MYL5Q02045 173 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 NSUN2Q08J23 767 aaKnown RBP eCLIP12.01□□□□□ -0.49
GTF3A-205ENST00000466776 MAP9Q49MG5 647 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 C14orf28Q4W4Y0 310 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 CERCAMQ5T4B2 595 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 ERMARDQ5T6L9 678 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 KIAA1614Q5VZ46 1190 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 SASS6Q6UVJ0 657 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 USP53Q70EK8 1073 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 B3GNT8Q7Z7M8 397 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 MCOLN2Q8IZK6 566 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 ZSCAN1Q8NBB4 408 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 GPR156Q8NFN8 814 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 PDXPQ96GD0 296 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 CELF6Q96J87 481 aaKnown RBP12.01□□□□□ -0.49
GTF3A-205ENST00000466776 ERGIC2Q96RQ1 377 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 ARHGAP9Q9BRR9 750 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 FOXP3Q9BZS1 431 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 DPEP2Q9H4A9 486 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 DHX35Q9H5Z1 703 aaKnown RBP12.01□□□□□ -0.49
GTF3A-205ENST00000466776 WDR26Q9H7D7 661 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 ANO10Q9NW15 660 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 PISDQ9UG56 409 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 LIMA1Q9UHB6 759 aaKnown RBP12.01□□□□□ -0.49
GTF3A-205ENST00000466776 RABGEF1Q9UJ41 708 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 MOSPD1Q9UJG1 213 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 LOXL2Q9Y4K0 774 aa12.01□□□□□ -0.49
GTF3A-205ENST00000466776 HEMK1Q9Y5R4 338 aaPredicted RBP12.01□□□□□ -0.49
GTF3A-205ENST00000466776 FLNBO75369 2602 aaKnown RBP12.01□□□□□ -0.49
GTF3A-205ENST00000466776 CFAP46Q8IYW2 2715 aa12□□□□□ -0.49
GTF3A-205ENST00000466776 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12□□□□□ -0.49
GTF3A-205ENST00000466776 A0A1W2PQM1 296 aa12□□□□□ -0.49
GTF3A-205ENST00000466776 PMS2P1A4D2B8 440 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms