RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 RPL26L1Q9UNX3 145 aaKnown RBP9.53□□□□□ -0.88
SDCCAG3-208ENST00000466579 RAI2Q9Y5P3 530 aa9.53□□□□□ -0.88
SDCCAG3-208ENST00000466579 CACNA1AO00555 2505 aa9.52□□□□□ -0.88
SDCCAG3-208ENST00000466579 A0A1B0GTQ1 180 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 A6NNZ2 444 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 NEMP1O14524 444 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 YKT6O15498 198 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 PCDHGA12O60330 932 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 MMP20O60882 483 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 OPHN1O60890 802 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 ZNF189O75820 626 aaPredicted RBP9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 PAK4O96013 591 aaPredicted RBP9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 PDHA1P08559 390 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 C6P13671 934 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 CD59P13987 128 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 CSRP1P21291 193 aaKnown RBP9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 XPAP23025 273 aaPredicted RBP9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 CD68P34810 354 aaPredicted RBP9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 CETN2P41208 172 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 LIG3P49916 1009 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 ATXN3P54252 364 aaPredicted RBP9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 C21orf59P57076 290 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 PFN3P60673 137 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 SGCGQ13326 291 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 LLGL1Q15334 1064 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 SHBQ15464 509 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 CFAP58Q5T655 872 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 ARMC12Q5T9G4 340 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 AADACL2Q6P093 401 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 RAVER1Q8IY67 606 aaKnown RBP9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 OXR1Q8N573 874 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 OR2I1PQ8NGU4 316 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 ACTL9Q8TC94 416 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 KLK6Q92876 244 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 IFT43Q96FT9 208 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 KLHDC7BQ96G42 594 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 COQ10AQ96MF6 247 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 TRIB3Q96RU7 358 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 LYSMD1Q96S90 227 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 GTPBP2Q9BX10 602 aaKnown RBP9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 C1QTNF7Q9BXJ2 289 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 GAREM1Q9H706 876 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 IL21RQ9HBE5 538 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 GLOD4Q9HC38 313 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 B4GALT6Q9UBX8 382 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 CA5BQ9Y2D0 317 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 FNDC3AQ9Y2H6 1198 aaKnown RBP9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 PCDHB9Q9Y5E1 797 aa9.52□□□□□ -0.89
SDCCAG3-208ENST00000466579 A0A0J9YYE9 177 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 POM121BA6NF01 834 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 H0Y8X5 98 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 PSMD11O00231 422 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 HEXIM1O94992 359 aaKnown RBP9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 TRBC1P01850 177 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 PRKCGP05129 697 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 CA4P22748 312 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 LHCGRP22888 699 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 NFKBIAP25963 317 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 VIPR1P32241 457 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 IGFALSP35858 605 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 CD86P42081 329 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 RABIFP47224 123 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 YPEL5P62699 121 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 OTUD4Q01804 1114 aaKnown RBP9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 ITKQ08881 620 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 ZNF211Q13398 564 aaPredicted RBP9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 CDKN3Q16667 212 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 WSCD2Q2TBF2 565 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 KANSL1Q7Z3B3 1105 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 ADAT2Q7Z6V5 191 aaKnown RBP9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 ZC3H18Q86VM9 953 aaKnown RBP9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 REXO1L1PQ8IX06 675 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 KLHDC8BQ8IXV7 354 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 SLC22A18ASQ8N1D0 253 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 TTC13Q8NBP0 860 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 TRIM58Q8NG06 486 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 OR13H1Q8NG92 308 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 BAHD1Q8TBE0 780 aaPredicted RBP9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 HTR3CQ8WXA8 447 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 AGAP3Q96P47 875 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 ALS2CR12Q96Q35 445 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 ELF4Q99607 663 aaPredicted RBP9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 WRAP53Q9BUR4 548 aaKnown RBP9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 CARD9Q9H257 536 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 USP29Q9HBJ7 922 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 PCDH9Q9HC56 1237 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 FZD3Q9NPG1 666 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 LZTFL1Q9NQ48 299 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 GDF3Q9NR23 364 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 TM7SF3Q9NS93 570 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 KCTD5Q9NXV2 234 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 TRHDEQ9UKU6 1024 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 DNPEPQ9ULA0 475 aa9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 COL5A1P20908 1838 aaPredicted RBP9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 CNOT1A5YKK6 2376 aaKnown RBP9.51□□□□□ -0.89
SDCCAG3-208ENST00000466579 ARID1BQ8NFD5 2236 aaPredicted RBP9.5□□□□□ -0.89
SDCCAG3-208ENST00000466579 SPTY2D1-AS1A0A0U1RR47 76 aa9.5□□□□□ -0.89
SDCCAG3-208ENST00000466579 CAPN8A6NHC0 703 aa9.5□□□□□ -0.89
SDCCAG3-208ENST00000466579 NPIPB15A6NHN6 443 aaPredicted RBP9.5□□□□□ -0.89
SDCCAG3-208ENST00000466579 FPGTO14772 594 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms