RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 CCDC117Q8IWD4 279 aaPredicted RBP19.83■□□□□ 0.76
SDF4-205ENST00000465727 SLC15A4Q8N697 577 aa19.83■□□□□ 0.76
SDF4-205ENST00000465727 FAM110BQ8TC76 370 aa19.83■□□□□ 0.76
SDF4-205ENST00000465727 TEKT5Q96M29 485 aa19.83■□□□□ 0.76
SDF4-205ENST00000465727 CORO1BQ9BR76 489 aa19.83■□□□□ 0.76
SDF4-205ENST00000465727 SLC39A3Q9BRY0 314 aa19.83■□□□□ 0.76
SDF4-205ENST00000465727 NAA50Q9GZZ1 169 aaKnown RBP19.83■□□□□ 0.76
SDF4-205ENST00000465727 DPEP3Q9H4B8 488 aa19.83■□□□□ 0.76
SDF4-205ENST00000465727 SMARCAD1Q9H4L7 1026 aa19.83■□□□□ 0.76
SDF4-205ENST00000465727 MAGEE1Q9HCI5 957 aa19.83■□□□□ 0.76
SDF4-205ENST00000465727 INTS10Q9NVR2 710 aaKnown RBP19.83■□□□□ 0.76
SDF4-205ENST00000465727 GIN1Q9NXP7 522 aa19.83■□□□□ 0.76
SDF4-205ENST00000465727 CCDC78A2IDD5 438 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 FAM149AA5PLN7 773 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 EI24O14681 340 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 SEC14L2O76054 403 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 GPX3P22352 226 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 RPS9P46781 194 aaKnown RBP19.82■□□□□ 0.76
SDF4-205ENST00000465727 SEPT6Q14141 434 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 CELF3Q5SZQ8 465 aaKnown RBP19.82■□□□□ 0.76
SDF4-205ENST00000465727 AGAP9Q5VTM2 703 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 FUNDC1Q8IVP5 155 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 MFSD6LQ8IWD5 586 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 DDIASQ8IXT1 998 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 OR9I1Q8NGQ6 314 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 PTCD2Q8WV60 388 aaKnown RBP19.82■□□□□ 0.76
SDF4-205ENST00000465727 HDAC10Q969S8 669 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 NTAN1Q96AB6 310 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 ELMO2Q96JJ3 720 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 ZNF277Q9NRM2 450 aaPredicted RBP19.82■□□□□ 0.76
SDF4-205ENST00000465727 TMPRSS4Q9NRS4 437 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 PSME2Q9UL46 239 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 TRAF6Q9Y4K3 522 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 RALGAPA2Q2PPJ7 1873 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 A8MT66 165 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 M0QYT0 321 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 C22orf31O95567 290 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 RBP1P09455 135 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 MBL2P11226 248 aaPredicted RBP19.82■□□□□ 0.76
SDF4-205ENST00000465727 SCAPQ12770 1279 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 SEMA3BQ13214 749 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 NEDD8Q15843 81 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 COQ5Q5HYK3 327 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 TMEM53Q6P2H8 277 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 RETREG3Q86VR2 466 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 ZC3H7AQ8IWR0 971 aaKnown RBP19.82■□□□□ 0.76
SDF4-205ENST00000465727 SLC15A3Q8IY34 581 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 WNT8BQ93098 351 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 MAGED4Q96JG8 741 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 PLEKHA5Q9HAU0 1116 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 IGSF5Q9NSI5 407 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 ZNF112Q9UJU3 913 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 TSC2P49815 1807 aa19.82■□□□□ 0.76
SDF4-205ENST00000465727 A0A087WZ62 844 aa19.81■□□□□ 0.76
SDF4-205ENST00000465727 SOWAHBA6NEL2 793 aa19.81■□□□□ 0.76
SDF4-205ENST00000465727 UMPSP11172 480 aa19.81■□□□□ 0.76
SDF4-205ENST00000465727 GFAPP14136 432 aa19.81■□□□□ 0.76
SDF4-205ENST00000465727 JAK1P23458 1154 aa19.81■□□□□ 0.76
SDF4-205ENST00000465727 RFC2P35250 354 aa19.81■□□□□ 0.76
SDF4-205ENST00000465727 GRM5P41594 1212 aa19.81■□□□□ 0.76
SDF4-205ENST00000465727 TAS2R39P59534 338 aa19.81■□□□□ 0.76
SDF4-205ENST00000465727 TPI1P60174 286 aa19.81■□□□□ 0.76
SDF4-205ENST00000465727 CTBP1Q13363 440 aa19.81■□□□□ 0.76
SDF4-205ENST00000465727 BCL2A1Q16548 175 aa19.81■□□□□ 0.76
SDF4-205ENST00000465727 PITRM1Q5JRX3 1037 aa19.81■□□□□ 0.76
SDF4-205ENST00000465727 DENND6AQ8IWF6 608 aa19.81■□□□□ 0.76
SDF4-205ENST00000465727 NIM1KQ8IY84 436 aa19.81■□□□□ 0.76
SDF4-205ENST00000465727 SPATA6LQ8N4H0 392 aa19.81■□□□□ 0.76
SDF4-205ENST00000465727 SCAIQ8N9R8 606 aa19.81■□□□□ 0.76
SDF4-205ENST00000465727 SLC16A10Q8TF71 515 aa19.81■□□□□ 0.76
SDF4-205ENST00000465727 FDXACB1Q9BRP7 624 aaPredicted RBP19.81■□□□□ 0.76
SDF4-205ENST00000465727 UNKQ9C0B0 810 aaKnown RBP19.81■□□□□ 0.76
SDF4-205ENST00000465727 ZFYVE28Q9HCC9 887 aa19.81■□□□□ 0.76
SDF4-205ENST00000465727 IFT80Q9P2H3 777 aaPredicted RBP19.81■□□□□ 0.76
SDF4-205ENST00000465727 AAR2Q9Y312 384 aaKnown RBP19.81■□□□□ 0.76
SDF4-205ENST00000465727 A0A0J9YYE9 177 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 NEMP2A6NFY4 417 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 J3QRK9 145 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 ADRA1BP35368 520 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 ARCN1P48444 511 aaKnown RBP19.8■□□□□ 0.76
SDF4-205ENST00000465727 GJA9P57773 515 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 ADARB1P78563 741 aaKnown RBP19.8■□□□□ 0.76
SDF4-205ENST00000465727 TRIM16LQ309B1 348 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 TBC1D21Q8IYX1 336 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 OFCC1Q8IZS5 231 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 SFRP1Q8N474 314 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 MINDY2Q8NBR6 621 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 C2CD4AQ8NCU7 369 aaPredicted RBP19.8■□□□□ 0.76
SDF4-205ENST00000465727 PAPD5Q8NDF8 572 aaKnown RBP19.8■□□□□ 0.76
SDF4-205ENST00000465727 FBXL8Q96CD0 374 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 MTG1Q9BT17 334 aaPredicted RBP19.8■□□□□ 0.76
SDF4-205ENST00000465727 CDHR5Q9HBB8 845 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 TNFRSF12AQ9NP84 129 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 GMIPQ9P107 970 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 MAP10Q9P2G4 905 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 ZNF639Q9UID6 485 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 CORINQ9Y5Q5 1042 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 ANGPT2O15123 496 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 ARPC2O15144 300 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 CNOT3O75175 753 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms