RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 IL22Q9GZX6 179 aa8.89□□□□□ -0.99
UBA3-208ENST00000465627 EBF3Q9H4W6 596 aa8.89□□□□□ -0.99
UBA3-208ENST00000465627 ROPN1Q9HAT0 212 aaPredicted RBP8.89□□□□□ -0.99
UBA3-208ENST00000465627 TMBIM4Q9HC24 238 aa8.89□□□□□ -0.99
UBA3-208ENST00000465627 SMYD2Q9NRG4 433 aa8.89□□□□□ -0.99
UBA3-208ENST00000465627 PIH1D1Q9NWS0 290 aaKnown RBP8.89□□□□□ -0.99
UBA3-208ENST00000465627 LGALS13Q9UHV8 139 aa8.89□□□□□ -0.99
UBA3-208ENST00000465627 HCN2Q9UL51 889 aa8.89□□□□□ -0.99
UBA3-208ENST00000465627 TICRRQ7Z2Z1 1910 aa8.89□□□□□ -0.99
UBA3-208ENST00000465627 SCN8AQ9UQD0 1980 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 A0A087WUV0 522 aaPredicted RBP8.88□□□□□ -0.99
UBA3-208ENST00000465627 FAM237BA0A1B0GVD1 139 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 GOLGA6CA6NDK9 693 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 MROH6A6NGR9 719 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 FAM159BA6NKW6 160 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 PRR5-ARHGAP8B1AHC4 643 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 AP3B1O00203 1094 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 TRAFD1O14545 582 aaPredicted RBP8.88□□□□□ -0.99
UBA3-208ENST00000465627 HTRA2O43464 458 aaPredicted RBP8.88□□□□□ -0.99
UBA3-208ENST00000465627 GOLGA6DP0CG33 693 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 PSMC3P17980 439 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 SP100P23497 879 aaPredicted RBP8.88□□□□□ -0.99
UBA3-208ENST00000465627 ARNTP27540 789 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 EIF2DP41214 584 aaKnown RBP8.88□□□□□ -0.99
UBA3-208ENST00000465627 SLC6A11P48066 632 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 STK19P49842 368 aaPredicted RBP8.88□□□□□ -0.99
UBA3-208ENST00000465627 SESN2P58004 480 aaPredicted RBP8.88□□□□□ -0.99
UBA3-208ENST00000465627 AP1S1P61966 158 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 ARHGAP8P85298 464 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 TRAF2Q12933 501 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 RUNX3Q13761 415 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 STAT4Q14765 748 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 CRYMQ14894 314 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 SIRPB2Q5JXA9 342 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 EMC10Q5UCC4 262 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 MBLAC2Q68D91 279 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 NAIF1Q69YI7 327 aaPredicted RBP8.88□□□□□ -0.99
UBA3-208ENST00000465627 ZNF449Q6P9G9 518 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 TRMT10BQ6PF06 316 aaKnown RBP8.88□□□□□ -0.99
UBA3-208ENST00000465627 MTERF4Q7Z6M4 381 aaKnown RBP8.88□□□□□ -0.99
UBA3-208ENST00000465627 SRLQ86TD4 932 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 ZNF354CQ86Y25 554 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 CCNJLQ8IV13 435 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 CYP4X1Q8N118 509 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 AHI1Q8N157 1196 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 NAT16Q8N8M0 369 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 UHMK1Q8TAS1 419 aaKnown RBP8.88□□□□□ -0.99
UBA3-208ENST00000465627 WFIKKN2Q8TEU8 576 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 MZB1Q8WU39 189 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 PGM2Q96G03 612 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 PKNOX2Q96KN3 472 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 EXOC2Q96KP1 924 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 ZNF778Q96MU6 729 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 BBC3Q96PG8 261 aaPredicted RBP8.88□□□□□ -0.99
UBA3-208ENST00000465627 XPO6Q96QU8 1125 aaKnown RBP8.88□□□□□ -0.99
UBA3-208ENST00000465627 KXD1Q9BQD3 176 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 MCMBPQ9BTE3 642 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 TDRD1Q9BXT4 1180 aaKnown RBP8.88□□□□□ -0.99
UBA3-208ENST00000465627 CEP44Q9C0F1 390 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 MFSD1Q9H3U5 465 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 MRM3Q9HC36 420 aaKnown RBP8.88□□□□□ -0.99
UBA3-208ENST00000465627 MED4Q9NPJ6 270 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 TREX1Q9NSU2 369 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 GOLGA6AQ9NYA3 693 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 NCDNQ9UBB6 729 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 ZC3H7BQ9UGR2 993 aaKnown RBP8.88□□□□□ -0.99
UBA3-208ENST00000465627 SOX13Q9UN79 622 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 CFAP46Q8IYW2 2715 aa8.88□□□□□ -0.99
UBA3-208ENST00000465627 MAGEB16A2A368 324 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 CXorf49A8MYA2 514 aaPredicted RBP8.87□□□□□ -0.99
UBA3-208ENST00000465627 WASH3PC4AMC7 463 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 PRRT4C9JH25 899 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 LDB2O43679 373 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 FAM155BO75949 473 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 USP1O94782 785 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 NDST3O95803 873 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 GSRP00390 522 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 CPP00450 1065 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 PDHA1P08559 390 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 SERPINF2P08697 491 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 TPH1P17752 444 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 PGAM1P18669 254 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 HLA-DPA1P20036 260 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 TGM1P22735 817 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 GJA4P35212 333 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 LMAN1P49257 510 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 DGKGP49619 791 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 ECT2LQ008S8 904 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 ACVR1Q04771 509 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 SULT2A1Q06520 285 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 CDK18Q07002 472 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 GRM2Q14416 872 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 EFTUD2Q15029 972 aaKnown RBP eCLIP8.87□□□□□ -0.991e-10■■■■■ 73.3
UBA3-208ENST00000465627 ANKRD20A4Q4UJ75 823 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 CEP85LQ5SZL2 805 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 ATXN7L2Q5T6C5 722 aaPredicted RBP8.87□□□□□ -0.99
UBA3-208ENST00000465627 C22orf39Q6P5X5 142 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 PKN3Q6P5Z2 889 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 TREML4Q6UXN2 200 aa8.87□□□□□ -0.99
UBA3-208ENST00000465627 MTSS1LQ765P7 747 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms