RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 RCBTB1Q8NDN9 531 aa14.56□□□□□ -0.08
SMC1A-204ENST00000463684 C9orf43Q8TAL5 461 aaPredicted RBP14.56□□□□□ -0.08
SMC1A-204ENST00000463684 FUBP1Q96AE4 644 aaKnown RBP14.56□□□□□ -0.08
SMC1A-204ENST00000463684 SUV39H2Q9H5I1 410 aa14.56□□□□□ -0.08
SMC1A-204ENST00000463684 CYP4F12Q9HCS2 524 aa14.56□□□□□ -0.08
SMC1A-204ENST00000463684 MRPL40Q9NQ50 206 aaKnown RBP14.56□□□□□ -0.08
SMC1A-204ENST00000463684 ZNF71Q9NQZ8 489 aaPredicted RBP14.56□□□□□ -0.08
SMC1A-204ENST00000463684 PCDHGA3Q9Y5H0 932 aa14.56□□□□□ -0.08
SMC1A-204ENST00000463684 AHCTF1Q8WYP5 2266 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 TLN1Q9Y490 2541 aaKnown RBP14.55□□□□□ -0.08
SMC1A-204ENST00000463684 FLNCQ14315 2725 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 IGHV5-10-1A0A0J9YXX1 117 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 CLEC18AA5D8T8 446 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 ZNF891A8MT65 544 aaPredicted RBP14.55□□□□□ -0.08
SMC1A-204ENST00000463684 FAM72CH0Y354 149 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 CAPN5O15484 640 aaPredicted RBP14.55□□□□□ -0.08
SMC1A-204ENST00000463684 INSIG1O15503 277 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 LRIG2O94898 1065 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 PIGNO95427 931 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 PLEKP08567 350 aaPredicted RBP14.55□□□□□ -0.08
SMC1A-204ENST00000463684 PNMA6AP0CW24 399 aaPredicted RBP14.55□□□□□ -0.08
SMC1A-204ENST00000463684 CYP11B1P15538 503 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 UGT1A3P35503 534 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 TRA2AQ13595 282 aaKnown RBP eCLIP14.55□□□□□ -0.088e-12■■■■■ 51.5
SMC1A-204ENST00000463684 CDO1Q16878 200 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 TSR1Q2NL82 804 aaKnown RBP14.55□□□□□ -0.08
SMC1A-204ENST00000463684 FAM72AQ5TYM5 149 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 FAM72DQ6L9T8 149 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 CLEC18BQ6UXF7 455 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 FAM72BQ86X60 149 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 DNAAF5Q86Y56 855 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 FAM71AQ8IYT1 594 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 CLEC18CQ8NCF0 446 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 AGBL5Q8NDL9 886 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 CCDC74BQ96LY2 380 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 ZNF641Q96N77 438 aaPredicted RBP14.55□□□□□ -0.08
SMC1A-204ENST00000463684 NUDT22Q9BRQ3 303 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 ASPSCR1Q9BZE9 553 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 LRRC4CQ9HCJ2 640 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 FGF22Q9HCT0 170 aa14.55□□□□□ -0.08
SMC1A-204ENST00000463684 AJAP1Q9UKB5 411 aaPredicted RBP14.55□□□□□ -0.08
SMC1A-204ENST00000463684 CFAP69A5D8W1 941 aa14.54□□□□□ -0.08
SMC1A-204ENST00000463684 PDE2AO00408 941 aaPredicted RBP14.54□□□□□ -0.08
SMC1A-204ENST00000463684 LSM8O95777 96 aaKnown RBP14.54□□□□□ -0.08
SMC1A-204ENST00000463684 HOXC4P09017 264 aaPredicted RBP14.54□□□□□ -0.08
SMC1A-204ENST00000463684 SDC4P31431 198 aa14.54□□□□□ -0.08
SMC1A-204ENST00000463684 CSTF2P33240 577 aaKnown RBP eCLIP14.54□□□□□ -0.08
SMC1A-204ENST00000463684 STAT1P42224 750 aa14.54□□□□□ -0.08
SMC1A-204ENST00000463684 MAZP56270 477 aaKnown RBP14.54□□□□□ -0.08
SMC1A-204ENST00000463684 TAF3Q5VWG9 929 aa14.54□□□□□ -0.08
SMC1A-204ENST00000463684 BRAT1Q6PJG6 821 aa14.54□□□□□ -0.08
SMC1A-204ENST00000463684 EMC1Q8N766 993 aa14.54□□□□□ -0.08
SMC1A-204ENST00000463684 CCL4L1Q8NHW4 92 aa14.54□□□□□ -0.08
SMC1A-204ENST00000463684 ZDHHC1Q8WTX9 485 aa14.54□□□□□ -0.08
SMC1A-204ENST00000463684 CPA5Q8WXQ8 436 aa14.54□□□□□ -0.08
SMC1A-204ENST00000463684 ART4Q93070 314 aa14.54□□□□□ -0.08
SMC1A-204ENST00000463684 EXOC2Q96KP1 924 aa14.54□□□□□ -0.08
SMC1A-204ENST00000463684 PSMG3-AS1Q96PY0 264 aa14.54□□□□□ -0.08
SMC1A-204ENST00000463684 DDA1Q9BW61 102 aa14.54□□□□□ -0.08
SMC1A-204ENST00000463684 SIX2Q9NPC8 291 aa14.54□□□□□ -0.08
SMC1A-204ENST00000463684 METTL5Q9NRN9 209 aaKnown RBP14.54□□□□□ -0.08
SMC1A-204ENST00000463684 SPATS2LQ9NUQ6 558 aaKnown RBP14.54□□□□□ -0.08
SMC1A-204ENST00000463684 SLC39A1Q9NY26 324 aa14.54□□□□□ -0.08
SMC1A-204ENST00000463684 ATP8A1Q9Y2Q0 1164 aa14.54□□□□□ -0.08
SMC1A-204ENST00000463684 B3GALT1Q9Y5Z6 326 aa14.54□□□□□ -0.08
SMC1A-204ENST00000463684 DOPEY2Q9Y3R5 2298 aa14.54□□□□□ -0.08
SMC1A-204ENST00000463684 SCN8AQ9UQD0 1980 aa14.53□□□□□ -0.08
SMC1A-204ENST00000463684 TSPAN11A1L157 253 aa14.53□□□□□ -0.08
SMC1A-204ENST00000463684 RAD1O60671 282 aa14.53□□□□□ -0.08
SMC1A-204ENST00000463684 RECQL5O94762 991 aaPredicted RBP14.53□□□□□ -0.08
SMC1A-204ENST00000463684 CCNB1P14635 433 aa14.53□□□□□ -0.08
SMC1A-204ENST00000463684 CD1CP29017 333 aa14.53□□□□□ -0.08
SMC1A-204ENST00000463684 MMP12P39900 470 aa14.53□□□□□ -0.08
SMC1A-204ENST00000463684 GPR3P46089 330 aa14.53□□□□□ -0.08
SMC1A-204ENST00000463684 ARSDP51689 593 aa14.53□□□□□ -0.08
SMC1A-204ENST00000463684 LIMK2P53671 638 aa14.53□□□□□ -0.08
SMC1A-204ENST00000463684 YBEYP58557 167 aaPredicted RBP14.53□□□□□ -0.08
SMC1A-204ENST00000463684 RAPGEF1Q13905 1077 aa14.53□□□□□ -0.08
SMC1A-204ENST00000463684 CYTH1Q15438 398 aa14.53□□□□□ -0.08
SMC1A-204ENST00000463684 C15orf59Q2T9L4 293 aaPredicted RBP14.53□□□□□ -0.08
SMC1A-204ENST00000463684 CCDC14Q49A88 953 aa14.53□□□□□ -0.08
SMC1A-204ENST00000463684 RAB6CQ53S08 254 aa14.53□□□□□ -0.08
SMC1A-204ENST00000463684 DCAF12Q5T6F0 453 aa14.53□□□□□ -0.08
SMC1A-204ENST00000463684 ZNF438Q7Z4V0 828 aa14.53□□□□□ -0.08
SMC1A-204ENST00000463684 PAF1Q8N7H5 531 aa14.53□□□□□ -0.08
SMC1A-204ENST00000463684 RXFP2Q8WXD0 754 aa14.53□□□□□ -0.08
SMC1A-204ENST00000463684 KIAA1143Q96AT1 154 aaPredicted RBP14.53□□□□□ -0.08
SMC1A-204ENST00000463684 SLC45A3Q96JT2 553 aa14.53□□□□□ -0.08
SMC1A-204ENST00000463684 MAGEB5Q9BZ81 275 aa14.53□□□□□ -0.08
SMC1A-204ENST00000463684 KLC2Q9H0B6 622 aa14.53□□□□□ -0.08
SMC1A-204ENST00000463684 RAB6CQ9H0N0 254 aa14.53□□□□□ -0.08
SMC1A-204ENST00000463684 WDR26Q9H7D7 661 aa14.53□□□□□ -0.08
SMC1A-204ENST00000463684 PRSS38A1L453 326 aa14.52□□□□□ -0.09
SMC1A-204ENST00000463684 BLACEA4D250 179 aa14.52□□□□□ -0.09
SMC1A-204ENST00000463684 NKX2-8O15522 239 aa14.52□□□□□ -0.09
SMC1A-204ENST00000463684 TEX33O43247 280 aa14.52□□□□□ -0.09
SMC1A-204ENST00000463684 FGF1P05230 155 aa14.52□□□□□ -0.09
SMC1A-204ENST00000463684 ELFN1P0C7U0 828 aa14.52□□□□□ -0.09
SMC1A-204ENST00000463684 EPHB2P29323 1055 aa14.52□□□□□ -0.09
SMC1A-204ENST00000463684 TRIM23P36406 574 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms